International Journal of Systematic and Evolutionary Microbiology (2002), 52, 1961–1967 DOI : 10.1099/ijs.0.02173-0 Carboxydocella thermautotrophica gen. nov., sp. nov., a novel anaerobic, CO-utilizing thermophile from a Kamchatkan hot spring Institute of Microbiology, Russian Academy of Sciences, Prospect 60 Let Oktyabrya 7/2, 117811 Moscow, Russia T. G. Sokolova, N. A. Kostrikina, N. A. Chernyh, T. P. Tourova, T. V. Kolganova and E. A. Bonch-Osmolovskaya Author for correspondence : Tatyana Sokolova. Tel : j7 095 135 4458. Fax : j7 095 135 6530. e-mail : sokolova!inmi.host.ru A novel anaerobic, thermophilic, CO-utilizing bacterium, strain 41T, was isolated from a terrestrial hot vent on the Kamchatka Peninsula. Strain 41T was found to be a Gram-positive bacterium, its cells being short, straight, motile rods. Chains of three to five cells were often observed. The isolate grew only chemolithoautotrophically on CO, producing equimolar quantities of H2 and CO2 (according to the equation COMH2O CO2MH2). Growth was observed in the temperature range 40–68 SC, with an optimum at 58 SC, and in the pH range 65–76, with an optimum at pH 70. The generation time under optimal conditions for chemolithotrophic growth was 11 h. The DNA GMC content was 46O1 mol %. Growth was completely inhibited by penicillin, ampicillin, streptomycin, kanamycin and neomycin. On the basis of the phenotypic and phylogenetic features, it is proposed that this isolate represents a new genus and species, Carboxydocella thermautotrophica gen. nov., sp. nov. (type strain 41T l DSM 12356T l VKM B-2282T). Keywords : terrestrial hot vents, carbon monoxide utilization, thermophilic anaerobe, Carboxydocella thermautotrophica INTRODUCTION Anaerobic oxidation of CO coupled to equimolar hydrogen and CO formation was first found in the purple non-sulfur, #mesophilic, phototrophic bacteria Rubrivivax gelatinosus (Willems et al., 1991) (previously Rhodocyclus gelatinosus ; Uffen, 1976, 1983) and Rhodospirillum rubrum (Bonam et al., 1989). Later, it was shown that the reaction COjH O CO jH # # (∆G! lk20 kJ) might be performed by# several phylogenetically diverse thermophilic bacteria. Among them, Carboxydothermus hydrogenoformans, isolated from terrestrial hot springs of the Kuril Islands, was the first taxonomically described representative (Svetlichny et al., 1991). Except for CO, the only substrate utilized by this organism was pyruvate. Another organism, ‘ Carboxydothermus restrictus ’, was isolated from a terrestrial hot vent on Raoul Island (Kermadek Archipelago, New Zealand) ................................................................................................................................................. The GenBank accession number for the 16S rDNA sequence of strain 41T is AY061974. (Svetlichny et al., 1994). Carboxydobrachium pacificum was the first isolate found to originate from the deepsea hot vents of the Okinawa Trough (Sokolova et al., 2001). In addition to being capable of anaerobic CO oxidation\H formation, it could also ferment diverse # organic substrates. All of these organisms are obligate or facultative lithotrophs, but have a requirement for yeast extract for growth. Here, we report the isolation of a novel CO-utilizing, H -producing, thermophilic # bacterium (from a thermal spring of the Geyzer Valley, Kamchatka Peninsula) that is an obligate lithoautotroph. METHODS Sampling. Samples of hot water, mud and cyanobacterial mat from a hot spring (60 mC, pH 8n6) near the Giant Geyser (Geyser Valley, Kamchatka Peninsula) were taken anaerobically in tightly stoppered bottles and transported (at ambient temperature) to the laboratory. Enrichment and isolation. For enrichment and isolation of anaerobic carboxydotrophic bacteria, the following medium (medium 1) was used (g l−") : NH Cl (1) ; MgCl ; 6H O % # # 02173 # 2002 IUMS Printed in Great Britain 1961 Downloaded from www.microbiologyresearch.org by IP: 88.99.165.207 On: Sat, 17 Jun 2017 02:19:26 T. G. Sokolova and others (0n33), CaCl ; 6H O (0n1), KCl (0n33), KH PO (0n5), # # # % resazurin (0n001), 1 ml trace-mineral solution (Kevbrin & Zavarzin, 1992) and 1 ml vitamin solution (Wolin et al., 1963). After being boiled, the medium was flushed with N # and cooled. NaHCO (0n5 g l−") and Na S ; 9H O (1n0 g l−") $ # # were then added and the pH was adjusted to 6n8 with 0n5 M HCl. Aliquots (10 ml each) of the medium were placed into 50 ml bottles and the headspaces filled with 100 % CO at atmospheric pressure. The incubation temperatures were 55 and 70 mC. Growth was determined using light microscopy and GLC detection of CO utilization and the formation of gaseous growth products. Positive enrichments were used for further purification. After a number of serial dilution transfers, colonies were obtained in roll-tubes prepared in 15 ml Hungate tubes on the same medium solidified with 5 % agar, with CO in the gas phase. Well-separated colonies were transferred into the same liquid medium as that used for enrichments. Light and electron microscopy. Light microscopy was carried out using a phase-contrast microscope with an oil-immersion objective (90\1n25). For electron microscopy, negative staining of whole cells was done with 2 % phosphotungstic acid. For the preparation of thin sections, cells were fixed with 5 % glutaraldehyde for 2 h and 1 % OsO for 4 h at 4 mC, % embedded in Epon-812 resin, thin-sectioned and stained with uranyl acetate and lead citrate. Electron micrographs were taken with a JEM-100C electron microscope. Physiology studies. Growth of the novel isolate was tested on different substrates in the same liquid mineral medium, with N in the gas phase. Possible substrates were added in# dividually at a concentration of 2 g l−" (final concentration). Possible electron acceptors were added at 2 g l−", and elemental sulfur at 10 g l−". CO, CO and H were analysed using a Chrom-5 (CSFR) gas # # chromatograph equipped with a thermal conductivity detector and a 1n2 m glass column filled with activated carbon AG-3. The carrier gas was argon and the temperature in the incubator was 25 mC. Volatile fatty acids were determined on a Chrom-5 gas chromatograph with a flame-ionization detector : the column was filled with Chromosorb 10 (Sigma), the temperature was 170 mC and the carrier gas was argon at a flow rate of 40 ml min−". The effect of temperature on growth was studied in medium 1 under a CO atmosphere. The effect of pH on growth was studied under a CO atmosphere in the same medium, except that the phosphate component of the medium was added in the form of 0n01 M phosphate buffer with the required pH. Temperature and pH optima were determined from the growth rates. The cell density was measured by direct cell counting. Sensitivity of the novel isolate to penicillin (100 µg ml−"), ampicillin (100 µg ml−"), streptomycin (100 µg ml−"), kanamycin (50 µg ml−") and neomycin (50 µg ml−") was tested in the same medium under a CO atmosphere. DNA isolation and base composition. DNA was prepared as described by Marmur (1961). The GjC content of the DNA was determined by melting-point analysis (Marmur & Doty, 1962) using Escherichia coli K-12 DNA as a reference. 16S rDNA sequence determination and analysis. 16S rDNA was selectively amplified from genomic DNA by a PCR using 5h-AGAGTTTGATCCTGGCTCAG-3h as the for- 1962 ward primer and 5h-TACGGTTACCTTGTTACGACTT3h as the reverse primer (Lane, 1991). The PCR was carried out in 100 µl reaction mixture containing 1 µg DNA template, 200 µM (each) primers, 200 µM (each) dNTPs and 3 U Tet-z polymerase (BioMaster) in reaction buffer (100 mM Tris\HCl pH 8p3, 500 mM KCl, 20 mM MgCl ). The PCR was performed using the following programme# : 30 amplification cycles of denaturation at 94 mC for 1 min, annealing at 42 mC for 1 min and extension at 72 mC for 1 min. The final extension was carried out at 72 mC for 6 min. The PCR products were purified using a PCR-Prep kit (Promega) as recommended by the manufacturer. The 16S rDNA was sequenced in both directions by using a set of forward and reverse universal primers (Lane, 1991). DNA sequencing was performed by using Sequenase version 2 of the VSB kit (USB). The 16S rDNA sequence was aligned with a representative set of 16S rRNA sequences obtained from the Ribosomal Database Project or from recent GenBank releases by using . Positions that had not been sequenced in one or more reference organisms were omitted from the analysis. Pairwise evolutionary distances were computed by using the correction of Jukes & Cantor (1969). Phylogenetic trees were constructed by the neighbour-joining method using the programs of the package (Van de Peer & De Wachter, 1994), by the maximum-likelihood method using the program (Strimmer & von Haeseler, 1996) and by the maximum-parsimony method using program of the package (Felsenstein, 1989) with bootstrap analysis of 100 trees. RESULTS AND DISCUSSION Enrichment and isolation For the enrichment of anaerobic, carboxydotrophic, thermophilic bacteria, bottles with liquid anaerobic medium and a CO gas phase were inoculated with about 1 g sample. After 2 days incubation at 55 mC, two of the bottles showed an increase in pressure from 140 to 160–170 kPa. Growth of small rod-shaped bacteria was observed. The CO content in the gas phase had decreased to 40 %, and about 30 % H and # the 30 % CO had appeared. After several transfers in # same medium, the enrichments were serially diluted 10-fold and transferred to solidified medium in rolltubes. After 4 days incubation at 60 mC, round, white colonies, about 0n5 mm in diameter, were observed. Single colonies were isolated into liquid medium and two pure cultures were obtained. Strain 41T was selected for further characterization. Morphology Cells of isolate 41T were straight rods of various lengths from 1 to 3 µm and about 0n4–0n5 µm in width, arranged singly or in short chains of three to five cells. Cells were motile due to lateral flagella (Fig. 1a). Electron microscopy of ultrathin sections revealed that the cell envelope was of the Gram-positive type, being composed of a cytoplasmic membrane and a doublelayer cell wall comprising an inner electron-dense layer and outer lighter layer. Cell membrane invaginations International Journal of Systematic and Evolutionary Microbiology 52 Downloaded from www.microbiologyresearch.org by IP: 88.99.165.207 On: Sat, 17 Jun 2017 02:19:26 Carboxydocella thermautotrophica gen. nov., sp. nov. (a) (b) ................................................................................................................................................. Fig. 2. Growth of strain 41T at 60 mC in mineral medium under a CO atmosphere. Cell density ($), CO consumption ( ), H2 production (>) and CO2 production (=) were monitored. the equation COjH O CO jH (Fig. 2). Neither # other#metabolic # methane, acetate nor any product was detected. The generation time of strain 41T under optimal conditions was 1n1 h. (c) ................................................................................................................................................. Fig. 1. Electron micrographs of cells of strain 41T. (a) Negative staining. (b, c) Thin sections. Bars, 0n5 µm. were often observed (Fig. 1b, c). The cells divided by binary transverse fission (Fig. 1b). Strain 41T did not grow on peptone, yeast extract, starch, cellobiose, sucrose, lactose, glucose, maltose, galactose, arabinose, fructose, acetate, formate, pyruvate, ethanol or methanol. A H \CO gas mixture (4 : 1, v\v) did not support growth.# No #growth was observed on acetate, ethanol or lactate in the presence or absence of elemental sulfur or sulfate. Neither sulfur nor sulfate was reduced during growth with CO. No growth or H S production occurred in the medium # sulfur or sulfate and H in the gas with elemental # phase. Penicillin, ampicillin, streptomycin, kanamycin and neomycin completely inhibited CO utilization and the growth of strain 41T. DNA base composition Growth characteristics Growth of strain 41T occurred within the temperature range 40–68 mC, with an optimum at 58 mC. No growth was observed at 37 or 70 mC. Strain 41T grew over a pH range of 6n5–7n6, with an optimum at 7n0, but no growth was detected at pH 6n2 or 7n8. Strain 41T grew only under strictly anaerobic conditions. It did not grow in medium without reducing agents, nor under a CO\air mixture (4 : 1, v\v). It grew in an atmosphere of 100 % CO (0n23 mmol CO in the gas phase ml−" medium) on the mineral medium without yeast extract or other organic compounds except vitamins. CO oxidation was coupled to H and # to CO formation in equimolar quantities according # The GjC content of the DNA of strain 41T was 46p1 mol %. Phylogenetic analyses We determined a partial 16S rDNA sequence (1456 nt) for strain 41T, corresponding to positions 37–1467 of the E. coli numbering. Preliminary comparisons (using ) with 16S rDNA sequences available in GenBank revealed that the novel isolate 41T was a member of the Bacillus\Clostridium subphylum of the Gram-positive bacteria. The highest score was found with 16S rDNA sequences of the Thermoanaerobacter–Syntrophomonas group, but it was no http://ijs.sgmjournals.org 1963 Downloaded from www.microbiologyresearch.org by IP: 88.99.165.207 On: Sat, 17 Jun 2017 02:19:26 T. G. Sokolova and others more than 89 %, so there were no sequences that were closely related to that of strain 41T. Several phylogenetic trees were constructed by changing the composition of reference organisms belonging to the Clostridium group. Regions of alignment uncertainty resulting from the presence of long inserts in 16S rDNA sequences of some members of this group (Rainey et al., 1993 ; Slobodkin et al., 1999) were omitted from the sequence analysis. A final comparison was carried out of 1322 nt of 16S rDNA sequences of strain 41T and 57 of the closest reference strains of the Thermoanaerobacter–Syntrophomonas group, combined members of clusters V–VIII of the Clostridium spectrum (Collins et al., 1994). This group, including species of the genera Desulfotomaculum, Thermoanaerobacter, Thermoanaerobacterium, Moorella, Anaerobranca and some others, was used for the reconstruction of a phylogenetic tree and the calculation of sequence similarity. The level of sequence similarity of strain 41T was relatively low and almost equal for all reference strains (85n3–90n7 %). In the phylogenetic tree constructed by using the neighbour-joining algorithm (Fig. 3), strain 41T was not clustered exactly with any genus or species of the Clostridium group. Trees constructed using other treeing algorithms had the same topology (data not shown). A variety of diverse bacteria possess CO-oxidizing enzymes, termed CO dehydrogenases, which allow them to assimilate CO as a sole source of carbon and energy. Aerobic carboxydotrophic bacteria grow heterotrophically on various organic compounds or chemolithoautotrophically on CO ; they are taxonomically diverse, consisting of more than 15 described species from eight genera (Zavarzin & Nozhevnikova, 1977 ; Meyer et al., 1986, 1993). In anaerobes, CO dehydrogenases are key enzymes of the acetyl-CoA pathway found in the following phylogenetically distant micro-organisms : acetogenic bacteria (Wood & Ljungdahl, 1991 ; Ljungdahl, 1994 ; Drake, 1994), sulfate-reducing bacteria (Schauder et al., 1987 ; Janssen & Schink, 1995 ; Oude Elferink et al., 1999 ; Fukui et al., 1999), photosynthetic bacteria (Uffen, 1983 ; Ensign, 1995), methanogenic archaea (Deppenmeier et al., 1996 ; Ferry, 1999) and nonmethanogenic archaea (Mo$ ller-Zinkhan & Thauer, 1990 ; Vorholt et al., 1995, 1997). Some of them can grow on CO as the only energy source. During growth on CO, homoacetogenic and methanogenic bacteria respectively produce acetate and methane. CO is a common component of volcanic gases in terrestrial and submarine hot springs. Thus, the ability to utilize CO might be assumed to be a widespread capacity of thermophilic micro-organisms. However, only a limited number of thermophilic species are capable of anaerobic CO utilization. Among the thermophilic prokaryotes, CO-utilizing methanogens are represented only by Methanothermobacter thermautotrophicus (Zeikus & Wolfe 1972 ; Wasserfallen et al., 1964 ................................................................................................................................................. Fig. 3. Phylogenetic tree showing the position of strain 41T. A consensus 16S rDNA sequence of the actinomycete lineage was chosen as the outgroup. The scale bar represents the expected number of changes per sequence position. Bootstrap values (expressed as percentages of 100 replications) are shown at branch points ; values greater than 80 % were considered significant. Triangles include the following sequences : Thermoanaerobacter thermohydrosulfuricus DSM 567T (L09161) ; Thermoanaerobacter sulfurophilus L-64T (Y16940) ; Thermoanaerobacter wiegelii Rt8.B1T (X92513) ; Thermoanaerobacter acetoethylicus ATCC 33265T (L09163) ; Thermoanaerobacter kivui DSM 2030T (L09160) ; Thermoanaerobacter brockii subsp. brockii DSM 1457T (L09165) ; Thermoanaerobacter mathranii A3T (Y11279) ; Thermoanaerobacter thermocopriae JT3-3T (L09167) ; Thermoanaerobacter ethanolicus JW 200T (L09162) ; Thermoanaerobacter brockii subsp. lactiethylicus SEBR 5268T (U14330) ; Thermoanaerobacter siderophilus SR4T (AF120479) ; Caldicellulosiruptor owensensis OLT (U80596) ; Caldicellulosiruptor kristjanssonii DSM 12137T (AJ004811) ; Caldicellulosiruptor lactoaceticus DSM 9545T (X82842) ; Caldicellulosiruptor saccharolyticus DSM 8903T (AF130258) ; Thermoanaerobacterium thermohydrosulfuricus E100-69T (L09161) ; Thermoanaerobacterium aotearoense JW/SL-NZ613T (X93359) ; Thermoanaerobacterium saccharolyticum DSM 7060T (L09169) ; Thermoanaerobacterium xylanolyticum DSM 7097T (L09172) ; Thermoanaerobacterium thermosaccharolyticum ATCC 7956T (M59119) ; Moorella thermoautotrophica JW 701/5 (X58354) ; Moorella glycerini DSM 11254T (U82327) ; Moorella thermoacetica DSM 521T (X58352) ; Syntrophomonas sapovorans DSM 3441T (AF022249) ; Syntrophomonas wolfei LYB (AF022248) ; Desulfotomaculum halophilum SEBR 3139T (U88891) ; Desulfotomaculum nigrificans NCIMB 8395 (X62176) ; Desulfotomaculum ruminis DSM 2154T (Y11572) ; International Journal of Systematic and Evolutionary Microbiology 52 Downloaded from www.microbiologyresearch.org by IP: 88.99.165.207 On: Sat, 17 Jun 2017 02:19:26 Carboxydocella thermautotrophica gen. nov., sp. nov. Table 1. Characteristics of anaerobic, thermophilic, carboxydotrophic bacteria ................................................................................................................................................................................................................................................................................................................. Data for reference species were taken from Svetlichny et al. (1991) (Carboxydothermus hydrogenoformans 2901T), Svetlichny et al. (1994) (‘ Carboxydothermus restrictus ’ R1) and Sokolova et al. (2001) (Carboxydobrachium pacificum JMT). Characteristic Terrestrial or marine Morphology Cell-wall structure Substrates Temperature for growth (mC) : Range Optimum pH for growth : Range Optimum Minimum doubling time (h) GjC content of DNA (mol %) Carboxydothermus hydrogenoformans 2901T ‘ Carboxydothermus restrictus ’ R1 Carboxydobrachium pacificum JMT Strain 41T Terrestrial Short, slightly curved rods with lateral flagella Gram-positive, globular S-layer CO, pyruvate Terrestrial Short, slightly curved rods with peritrichous flagella Gram-positive, globular S-layer CO Marine Non-motile, long, thin rods, sometimes branching Gram-positive with S-layer CO, pyruvate, peptone, yeast extract, starch, cellobiose, glucose, galactose, fructose Terrestrial Straight, short rods with lateral flagella Gram-positive CO 40–78 70–72 45–80 70 50–80 70 40–68 58 6n6–8n0 7n0 2n0 39–41 6n6–8n0 7n0 8n3 39 5n8–7n6 6n9 10n2 33 6n5–7n6 7n0 1n1 46 2000). Thermophilic acetogens include Moorella thermoacetica (Fontaine et al., 1942 ; Collins et al., 1994) and Moorella thermoautotrophica (Wiegel et al., 1981 ; Collins et al., 1994). Anaerobic CO oxidation coupled to molecular hydrogen formation has been shown for four thermophilic isolates. Like strain 41T, none of these organisms grows on a mixture of H and # in CO . Their comparative characteristics are given # Table 1. All of them are anaerobic thermophilic bacteria with Gram-positive cell-wall structures. Phylogenetically, they all belong to the Gram-positive bacteria with low GjC content, but they do not form a separate cluster. The novel isolate differs from them in growth-temperature characteristics and in the range of energy substrates. According to 16S rDNA analyses, strain 41T forms a new, separate line of descent within the low-GjC-content Gram-positive subdivision of the Bacteria. On the basis of the 16S rRNA sequence data, it can not be assigned to any validly described genus. On the basis of the physiological and phylogenetic features of strain 41T, we propose the description of a new genus and species, Carboxydocella thermautotrophica gen. nov., sp. nov. Desulfotomaculum aeronauticum DSM 10349T (X98407) ; ‘ Desulfotomaculum reducens ’ MI-1 (U95951) ; Desulfotomaculum putei SMCC W459T (AF053929) ; Desulfotomaculum acetoxidans DSM 771T (Y11566) ; Desulfotomaculum kuznetsovii DSM 6115T (AF009646) ; Desulfotomaculum luciae SLTT (AF069293) ; Desulfotomaculum australicum AB33T (M96665) ; Desulfotomaculum thermocisternum ST90T (U33455) ; Desulfotomaculum thermobenzoicum DSM 6193T (L15628) ; Desulfotomaculum thermoacetoxidans DSM 5813T (Y11573) ; Desulfotomaculum geothermicum DSM 3669T (Y11567) ; Desulfotomaculum thermosapovorans DSM 6562T (Y11575) ; Anaerobranca horikoshii JW/YL-138T (U21809) ; Anaerobranca gottschalkii DSM 13577T (AF203703) ; Desulfosporosinus orientis DSM 765T (Y11570) ; [Desulfotomaculum] auripigmentum ORex (U85624) ; Desulfitobacterium dehalogenans JW/IU-DC1T (U40078) ; Desulfitobacterium frappieri PCP-1T (U40078). Description of Carboxydocella gen. nov. Carboxydocella (Car.bo.xy.do.celhla. N.L. neut. n. carboxydum carbon monoxide ; L. fem. n. cella cell ; N.L. fem. n. Carboxydocella carbon monoxideutilizing bacterium). Cells are short, straight rods. Motile. Cell wall of Gram-positive type. Cells divide by binary transverse fission. Bacterium. Obligate anaerobe. Thermophile. Neutrophile. Grows chemolithoautotrophically on CO. Utilizes CO as the sole energy source, with equimolar formation of H and CO according to the # GjC content equation COjH O CO# jH . The # # # of the DNA of the type strain of the type species is 46p1 mol %. The type species is Carboxydocella thermautotrophica. Description of Carboxydocella thermautotrophica sp. nov. Carboxydocella thermautotrophica (therm.au.to.troh phi.ca. Gr. adj. thermos hot ; Gr. adv. auto self ; Gr. adj. trophikos one who feeds ; N.L. fem. adj. thermautotrophica thermophilic and autotrophic, indicating that the organism grows at elevated temperatures and uses CO as the sole source of carbon and energy). The following characteristics are observed in addition to those given in the genus description. Cells are short, straight rods, about 0n4–0n5 µm in width and varying in length from 1 to 3 µm, arranged singly or in short chains of three to five cells. Motile due to lateral flagella. On solid medium, produces round, white, translucent colonies. Grows within the temperature range 40–68 mC, with an optimum at 58 mC. The pH for growth ranges from 6n5 to 7n6, with an optimum at pH 7n0. Growth and CO consumption are inhibited by penicillin, ampicillin, streptomycin, kanamycin and http://ijs.sgmjournals.org 1965 Downloaded from www.microbiologyresearch.org by IP: 88.99.165.207 On: Sat, 17 Jun 2017 02:19:26 T. G. Sokolova and others neomycin. Does not grow on peptone, yeast extract, starch, cellobiose, sucrose, lactose, glucose, maltose, galactose, arabinose, fructose, acetate, formate, pyruvate, ethanol, methanol or a H \CO gas mixture # # ethanol or (4 : 1, v\v). Does not grow on H , acetate, # lactate in the presence or absence of elemental sulfur or sulfate. Does not reduce elemental sulfur or sulfate during growth with CO. The GjC content of the DNA of the type strain is 46p1 mol %. The type strain is strain 41T (l DSM 12356T l VKM B-2282T), isolated from a terrestrial hot vent of the Geyzer Valley, Kamchatka Peninsula. ACKNOWLEDGEMENTS The authors are grateful to G. A. Karpov, Institute of Volcanology, Far-East Scientific Centre, for help with the organization of the expedition and sampling. This work was supported by the ‘ Biodiversity ’ programme of the Russian Ministry of Industry, Science and Technology and NATO grant LST.CLG.978269. REFERENCES Bonam, D., Lehman, L., Roberts, G. P. & Ludden, P. W. (1989). Regulation of carbon monoxide dehydrogenase and hydrogenase in Rhodospirillum rubrum : effects of CO and oxygen on synthesis and activity. J Bacteriol 171, 3102–3107. Collins, M. D., Lawson, P. A., Willems, A., Cordoba, J. 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