DNA, the Genetic Material Say Thanks to the Authors Click http://www.ck12.org/saythanks (No sign in required) To access a customizable version of this book, as well as other interactive content, visit www.ck12.org CK-12 Foundation is a non-profit organization with a mission to reduce the cost of textbook materials for the K-12 market both in the U.S. and worldwide. Using an open-source, collaborative, and web-based compilation model, CK-12 pioneers and promotes the creation and distribution of high-quality, adaptive online textbooks that can be mixed, modified and printed (i.e., the FlexBook® textbooks). Copyright © 2015 CK-12 Foundation, www.ck12.org The names “CK-12” and “CK12” and associated logos and the terms “FlexBook®” and “FlexBook Platform®” (collectively “CK-12 Marks”) are trademarks and service marks of CK-12 Foundation and are protected by federal, state, and international laws. Any form of reproduction of this book in any format or medium, in whole or in sections must include the referral attribution link http://www.ck12.org/saythanks (placed in a visible location) in addition to the following terms. Except as otherwise noted, all CK-12 Content (including CK-12 Curriculum Material) is made available to Users in accordance with the Creative Commons Attribution-Non-Commercial 3.0 Unported (CC BY-NC 3.0) License (http://creativecommons.org/ licenses/by-nc/3.0/), as amended and updated by Creative Commons from time to time (the “CC License”), which is incorporated herein by this reference. Complete terms can be found at http://www.ck12.org/about/ terms-of-use. Printed: July 1, 2015 www.ck12.org C HAPTER • • • • Chapter 1. DNA, the Genetic Material 1 DNA, the Genetic Material Explain the importance of DNA. Define and describe a nucleotide. Describe the shape of DNA. Summarize the base-pairing rules. Where’s the instructions? How do your cells know what to do? Just like computers have lines of code to tell them what to do, your cells also have instructions. Your cells’ instructions are molecules of DNA. The DNA Pioneers In the early 1950s, the race to discover DNA was on. At Cambridge University, graduate student Francis Crick and research fellow James Watson had become interested in the field. Meanwhile, at King’s College in London, Maurice Wilkins and Rosalind Franklin were also studying DNA. The Cambridge team’s approach was to make physical models to narrow down the possibilities and eventually create an accurate picture of the molecule. The King’s team took an experimental approach, looking particularly at x-ray diffraction images of DNA. In 1951, Watson attended a lecture by Franklin on her work. She had found that DNA can exist in two forms, depending on the relative humidity in the surrounding air. This had helped her understand that the phosphate part of 1 www.ck12.org FIGURE 1.1 James Watson and Francis Crick show off their DNA Model in 1953. the molecule was on the outside. Watson returned to Cambridge with this information and together with Crick made a model that ultimately did not measure up to the scientific facts. It caused the head of their unit to tell them to stop DNA research. Meanwhile, Franklin, working mostly alone, found that her x-ray diffractions showed that the "wet" form of DNA (in the higher humidity) had all the characteristics of a helix, or twisted ladder shape. She suspected that all DNA was helical but did not want to announce this finding until she had sufficient evidence on the other form as well. Her partner Wilkins was frustrated because he did not want to wait. In January, 1953, he showed Franklin’s results to Watson, apparently without her knowledge or consent. Watson and Crick took a crucial conceptual step, suggesting the molecule was made of two chains of nucleotides, each in a helix as Franklin had found, but one going up and the other going down. Crick had just learned of Chargaff’s findings about base pairs in the summer of 1952. He added that to the model, so that matching base pairs interlocked in the middle of the double helix to keep the distance between the chains constant. Watson and Crick showed that each strand of the DNA molecule was a template for the other. During cell division the two strands separate and on each strand a new "other half" is built, just like the one before. This way DNA can reproduce itself without changing its structure (except for occasional mutations). The structure so perfectly fit the experimental data that it was almost immediately accepted. DNA’s discovery has been called the most important biological work of the last 100 years, and the field it opened may be the scientific frontier for the next 100. By 1962, when Watson, Crick, and Wilkins won the Nobel Prize for physiology/medicine, Franklin had died from cancer. The Nobel Prize only goes to living recipients, and can only be shared among three winners. What is DNA? DNA is the material that makes up our chromosomes and stores our genetic information. When you build a house, you need a blueprint, a set of instructions that tells you how to build. The DNA is like the blueprint for living organisms. The genetic information is a set of instructions that tell your cells what to do. (See video "Stated Clearly - What is DNA") 2 www.ck12.org Chapter 1. DNA, the Genetic Material MEDIA Click image to the left or use the URL below. URL: http://www.ck12.org/flx/render/embeddedobject/156012 DNA is an abbreviation for deoxyribonucleic acid (de-oxy-ribo-nu-cleic acid). As you may recall, nucleic acids are a type of molecule that store information. The deoxyribo part of the name refers to the name of the sugar that is contained in DNA, deoxyribose. DNA may provide the instructions to make up all living things, but it is actually a very simple molecule. DNA is made of a very long chain of nucleotides. In fact, in you, the smallest DNA molecule has well over 20 million nucleotides. Nucleotides Nucleotides are composed of three main parts: 1. a phosphate group. 2. a 5-carbon sugar (deoxyribose in DNA). 3. a nitrogen-containing base. FIGURE 1.2 The only difference between each nucleotide is the identity of the base. There are only four possible bases that make up each DNA nucleotide: adenine (A), guanine (G), thymine (T), and cytosine (C). The Genetic Code The various sequences of the four nucleotide bases make up the genetic code of your cells. It may seem strange that there are only four letters in the “alphabet” of DNA. But since your chromosomes contain millions of nucleotides, there are many, many different combinations possible with those four letters. But how do all these pieces fit together? James Watson and Francis Crick won the Nobel Prize in 1962 for piecing together the structure of DNA. Together with the work of Rosalind Franklin and Maurice Wilkins, they determined that DNA is made of two strands of nucleotides formed into a double helix. Think of a spiral staircase or a twisted 3 www.ck12.org ladder, with the sugar and phosphate groups on the outside (frame), and the paired bases connecting the two strands on the inside of the helix (the steps or rungs) ( Figure 1.3). FIGURE 1.3 DNA’s three-dimensional structure is a double helix. The hydrogen bonds between the bases at the center of the helix hold the helix together. Base-Pairing The bases in DNA do not pair randomly. When Erwin Chargaff looked closely at the bases in DNA, he noticed that the percentage of adenine (A) in the DNA always equaled the percentage of thymine (T), and the percentage of guanine (G) always equaled the percentage of cytosine (C). Watson and Crick’s model explained this result by suggesting that A always pairs with T, and G always pairs with C in the DNA helix. Therefore A and T, and G and C, are "complementary bases," or bases that always pair together, known as a base-pair. The base-pairing rules state that A will always bind to T, and G will always bind to C ( Figure 1.4). For example, if one DNA strand reads ATGCCAGT, the other strand will be made up of the complementary bases: TACGGTCA. Vocabulary • • • • • • base-pair: Bases in DNA that complement each other and are linked by hydrogen bonds. chromosome: DNA wound around proteins; the chromosome forms during prophase of mitosis and meiosis. DNA (deoxy-ribo-nucleic acid): Nucleic acid that is the genetic material of all organisms. double helix: Shape of DNA; a double spiral, similar to a spiral staircase. nucleic acid: Class of organic compound; nucleic acid includes DNA and RNA. nucleotide: Units that make up DNA; the nucleotide consists of a 5-carbon sugar, a phosphate group, and a nitrogen-containing base. Summary • DNA stores the genetic information of the cell in the sequence of its 4 bases: adenine, thymine, guanine, and cytosine. 4 www.ck12.org Chapter 1. DNA, the Genetic Material FIGURE 1.4 The chemical structure of DNA includes a chain of nucleotides consisting of a 5carbon sugar, a phosphate group, and a nitrogen base. Notice how the sugar and phosphate form the backbone of DNA (strands highlighted in pink), with the hydrogen bonds between the bases joining the two strands. • DNA is made of a long chain of nucleotides consisting of a 5-carbon sugar, a phosphate group, and nitrogencontaining base. Explore More Use the resources below to answer the questions that follow. Explore More I • What Is DNA? at http://learn.genetics.utah.edu/content/begin/dna/ . Click on the box "What Is DNA?" on the left side of the page. 1. 2. 3. 4. Where is nuclear DNA located in a eukaryotic organism? Describe the structure of DNA. What is another name for the "sentences" that DNA encodes? What to genes tell a cell to do? Explore More II • Go to this link to build a DNA molecule: http://learn.genetics.utah.edu/content/begin/dna/builddna/ . 1. How long does it take a human cell to copy the DNA in its nucleus before it divides? 5 www.ck12.org 2. How many new cells does your body produce every day? 3. How many hydrogen bonds form between guanine and cytosine? How many hydrogen bonds form between adenine and thymine? Do you think this relationship helps minimize errors? Explain your reasoning. 4. What steps does the cell take to increase the rate of DNA replication? Review 1. 2. 3. 4. Describe the structure of DNA. What does a nucleotide consist of? What are the base-pairing rules? If one DNA strand reads CCGTAATGCAT, what will be the sequence of the complimentary strand? References 1. Image copyright ermess, 2014. The double helix of DNA. Used under license from Shutterstock.com 2. Mariana Ruiz Villarreal (LadyofHats). The chemical structure of DNA. CC BY-NC 3.0 6
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