bioMérieux Chemin de l’Orme F- 69280 MARCY L’ETOILE NF VALIDATION Validation of alternative analytical methods Application in food microbiology Summary report EN ISO 16140 validation study of the CampyFood ID Agar Detection (BIO 12/30-05/10) for the detection of Campylobacter spp. in meat and poultry products, and production environmental samples Qualitative method This document consists of 78 pages, including 13 appendices. Only copies including the totality of this document are authorised. Version 0 December 29, 2016 ADRIA DEVELOPPEMENT Creac’h Gwen - F. 29196 QUIMPER Cedex - Tél. (33) 02.98.10.18.18 - Fax (33) 02.98.10.18.08 E-mail : [email protected] - Site web : http://www.adria.tm.fr ASSOCIATION LOI DE 1901 - N° SIRET 306 964 271 00036 - N° EXISTENCE 532900006329 - N°TVA FR4530696427100036 bioMérieux 1 INTRODUCTION _______________________________________________ 4 2 METHOD PROTOCOLS _________________________________________ 4 3 2.1 Alternative method ______________________________________________ 4 2.2 Reference method _______________________________________________ 6 INITIAL VALIDATION STUDY (IPL- 2010) AND EXTENSION STUDIES (ADRIA Développement - 2014, 2016) ______________________________ 6 3.1 3.2 3.3 Initial validation study (Institut Pasteur de Lille - 2010) _________________ 6 3.1.1 Method Comparison Study__________________________________________ 6 3.1.2 Practicability ____________________________________________________ 14 3.1.3 Inter-laboratory study (IPL, 2010) ___________________________________ 16 3.1.4 Conclusion _____________________________________________________ 25 Extension study (ADRIA Développement - 2014) _____________________ 25 3.2.1 Protocol _______________________________________________________ 25 3.2.2 Results ________________________________________________________ 25 Extension study (ADRIA Développement, 2016)______________________ 27 3.3.1 Protocol _______________________________________________________ 27 3.3.2 Results ________________________________________________________ 27 3.3.3 Conclusion _____________________________________________________ 28 Appendix 1 – Flow diagram of the alternative method CampyFood ID Agar Detection ______________ Appendix 2 – Flow diagram of the reference method EN ISO 10272-1 (April 2006): Microbiology of food and animal feeding stuffs. Horizontal method for detection and enumeration of Campylobacter spp. Part 1: detection method _____________________________________________________________ Appendix 3 – Artificial contamination (Initial validation - IPL 2010) in French _____________________ Appendix 4 – Relative accuracy: raw data (Initial validation - IPL 2010) _________________________ Appendix 5 – Inclusivity and exclusivity: raw data (Initial validation - IPL 2010) ___________________ Appendix 6 - Results obtained by each collaborator laboratory and by the expert laboratory (Initial validation - IPL 2010) ________________________________________________________________ Appendix 7 - Accordance (Initial validation - IPL 2010) ______________________________________ Appendix 8 - Concordance (Initial validation - IPL 2010) _____________________________________ Appendix 9 - Inclusivity / Exclusivity: protocols (Extension study - ADRIA Développement 2014) _____ Appendix 10 - Inclusivity study: raw data (Extension study - ADRIA Développement 2014) __________ Appendix 11 - Exclusivity study: raw data (Extension study - ADRIA Développement 2014) _________ Appendix 12 - Protocol applied for the extension study (Extension study ADRIA Développement, 2016) _________________________________________________________ Appendix 13 - Inclusivity and exclusivity: raw data (Extension study - ADRIA Développement, 2016) __ ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 2/78 29 30 31 33 40 44 52 54 56 57 64 69 70 December 29, 2016 bioMérieux Quality Assurance documents related to this study can be consulted upon request from bioMérieux. The technical protocol and the result interpretation were realised according to the EN ISO 16140 (2003) and the AFNOR technical rules. Company: bioMérieux Chemin de l’Orme F-69280 MARCY L’ETOILE Expert Laboratory: ADRIA Développement ZA Creac’h Gwen F-29196 QUIMPER Cedex Studied method: CampyFood Agar (CFA) (BIO 12/30 - 05/10) Validation standard: ISO 16140 (October 2003): Food microbiology – Protocol for the validation of alternative methods Reference method: ISO 10272-1 - Microbiology of food and animal feeding stuffs - Horizontal method for detection and enumeration of Campylobacter spp. - Part 1: detection method Scope: Meat and poultry products and production environmental samples Certification organism: AFNOR Certification (http://nf-validation.afnor.org/) ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 3/78 December 29, 2016 bioMérieux 1 INTRODUCTION The CampyFood Agar (CFA) Detection is validated since the 21st May 2010 (Certificate Number BIO 12/30-05/10) with a confirmation using the VIDAS CAM or a traditional confirmation procedure. An extension of the scope was obtained in January 2014 for the confirmation of positive results by using a latex test (CAMPYLOBACTER spp latex kit (Reéf. MGNF46)). An extension study was set up in March 2016 to allow the use of the VITEK MS, automated mass spectrometry microbial identification system that uses Matrix Assisted Laser Desorption Ionization Time-of-Flight (MALDI.TOF) technology and a comprehension database of relevant species. 2 METHOD PROTOCOLS 2.1 Alternative method Protocol The flow diagram of the alternative method is given in Appendix 1. The method comprises: - an enrichment step for 48h ± 4h at 41.5°C ± 1°C in the CampyFood broth (CFB) i.e. bioMérieux reference 42642/42643, in a specific blending bag, the Combibag (bioMérieux, reference 30551). Incubation of CFB in microaerobic atmosphere is achieved with the GENbox microaer atmosphere generators (bioMérieux, reference 96125) set up in a “pocket” of the Combibag. The bag was then closed by a clip seal provided in the kit, - streaking on a specific CampyFood Agar (or CFA), incubated for 44h ± 4h at 41.5°C ± 1°C in microaerobic conditions. Note 1: Before addition of the sample, CFB is required to be at room temperature. Note 2: The time between opening the GENbox bag and closing the Combibag shall not exceed 30 seconds. ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 4/78 December 29, 2016 bioMérieux The characteristic colonies are identified using either: - Conventional tests described in the standardized method: purification on Columbia blood agar, then examination of morphology and motility, microaerobic growth at 25°C, aerobic growth at 41,5 °C, detection of oxidase activity, - A VIDAS CAM test from 1 to 5 characteristic colonies, after resuspension of the colony in 2 ml tryptone salt, - Realization of a latex test (CAMPYLOBACTER spp latex kit (Ref. MGNF46)) from a typical isolated colony, - Confirmation using the VITEK MS from a typical isolated colony from CFA or Columbia blood agar (software version V3.1), - Simplified conventional tests: inoculation of a Columbia blood agar followed by incubation for 48 to 72 hours at 41.5°C in microaerobic conditions, and streaking on a Columbia blood agar followed by incubation for 48 to 72 hours at 41.5°C in aerobic conditions (inoculation of a maximum of 5 streaks of colonies per plate). The microscopic examination of morphology and motility, and detection of oxidase activity are performed only on strict microaerobic colonies. Note: Before 48 hours incubation, colonies are not big enough for confirmations. All confirmations must be done from 48 hours isolated colonies. Principle The CampyFood Agar contains specific activators facilitating the growth of Campylobacter, a selective mixture allowing the inhibition of most of the contaminants and a coloured indicator that facilitates the reading. The characteristic colonies seem red orange-coloured in red Bordeaux, with sometimes a metallic reflection. Remark: the metallic reflection remains a criterion of orientation; the other microorganisms can also present this characteristic. Sometimes, the colonies of Campylobacter can present a tint going from pink-red to dark brown, or spread out and to present a dark red-orangecoloured centre, a suburb of granular aspect and irregular edges. ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 5/78 December 29, 2016 bioMérieux 2.2 Reference method The reference method is the EN ISO 10272-1 - Microbiology of food and animal feeding stuffs - Horizontal method for detection and enumeration of Campylobacter spp. - Part 1: detection method (See Appendix 2). 3 INITIAL VALIDATION STUDY (IPL- 2010) AND EXTENSION STUDIES (ADRIA Développement - 2014, 2016) 3.1 Initial validation study (Institut Pasteur de Lille - 2010) 3.1.1 Method Comparison Study The relative accuracy is the closeness of agreement between a test result and the accepted reference value. The relative specificity is defined as the degree to which a method is affected (or not) by the other components present in a multi-component sample; that is, it is the ability of the method to measure exactly a given analyte, or its amount, within the sample without interference from non-target components such as matrix effect or background noise. The relative sensitivity is defined as the ability of the alternative method to detect two different amounts of analyte measured by the reference method within a given matrix over the whole measurement range; that is, it is the minimal quantity variation (increase of the analyte concentration x) which gives a significant variation of the measured signal (response y). 3.1.1.1 Relative accuracy, relative specificity and relative sensitivity Number and nature of the samples 208 samples were analyzed; the distribution per tested category and type is given in the Table 1. ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 6/78 December 29, 2016 bioMérieux Table 1 - Distribution per tested category and type Category Poultry Products Other meat products Types Raw, frozen Preparations with poultry, raw or cooked Rinsed carcass Skin of poultry neck Total Raw meat Raw flavoured meats Ready-made meal Total Positive* Negative Total 15 14 29 4 10 14 8 0 8 9 4 13 36 20 7 6 33 28 27 12 10 49 64 47 19 16 82 Production Various waters environmental samples Surface samples Residues and scraps Total 8 11 19 13 9 30 12 9 32 25 18 62 TOTAL 99 109 208 * These are positive results by either one or two methods. Artificial contamination of the samples and percentage Artificial contaminations were done by spiking. The strains were stressed using various injury protocols (See Appendix 3). The injury was evaluated by comparing enumeration results onto selective and non selective agars. Among the 99 positive samples, 44.5 % were naturally contaminated. Results of assays The analyses were performed in single using the two methods. The raw data are given in Appendix 4. The typical colonies observed on CFA were confirmed by: - the conventional tests described in the EN ISO 10272.1 standard or with the simplified conventional tests, - applying the VIDAS CAM test. ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 7/78 December 29, 2016 bioMérieux The paired results are given in Table 2 for all samples and Tables 3 to 5 per category. Table 2 - Overall results Simplified conventional tests VIDAS CAM Responses Positive reference method (R+) Negative reference method (R-) Positive alternative method (A+) Positive agreement (A+/R+) PA = 83 Positive deviation (R-/A+) PD = 14 Negative alternative method (A-) Negative deviation (A-/R+) ND = 2 (PPND = 2) Negative agreement (A-/R-) NA = 109 (PPNA = 2) Positive alternative method (A+) Positive agreement (A+/R+) PA = 83 Positive deviation (R-/A+) PD = 14 Negative alternative method (A-) Negative deviation (A-/R+) ND = 2 (PPND = 2) Negative agreement (A-/R-) NA = 109 (PPNA = 2) A+ = positive confirmed A- = immediate negatives and negatives after confirmation when presumed positive Identical results were found using both confirmation methods. The results for each category are presented in Table 3, 4 and 5: Table 3 - Poultry Products Positive reference Negative reference method (R+) method (R-) Positive alternative Positive agreement (A+/R+) Positive deviation (R-/A+) Simplified method (A+) PA = 31 PD = 5 conventional tests Negative alternative Negative deviation (A-/R+) Negative agreement (A-/R-) method (A-) ND = 0 (PPND = 0) NA = 28 (PPNA = 2) Positive alternative Positive agreement (A+/R+) Positive deviation (R-/A+) method (A+) PA = 31 PD = 5 Negative alternative Negative deviation (A-/R+) Negative agreement (A-/R-) method (A-) ND = 0 (PPND = 0) NA = 28 (PPNA = 2) Responses VIDAS CAM ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 8/78 December 29, 2016 bioMérieux Table 4 - Other meat products Positive reference Negative reference method (R+) method (R-) Positive alternative Positive agreement (A+/R+) Positive deviation (R-/A+) Simplified method (A+) PA = 28 PD = 4 conventional tests Negative alternative Negative deviation (A-/R+) Negative agreement (A-/R-) method (A-) ND = 1 (PPND = 0) NA = 49 (PPNA = 0) Positive alternative Positive agreement (A+/R+) Positive deviation (R-/A+) method (A+) PA = 28 PD = 4 Negative alternative Negative deviation (A-/R+) Negative agreement (A-/R-) method (A-) ND = 1 (PPND = 0) NA = 49 (PPNA = 0) Responses VIDAS CAM Table 5 - Production environmental samples Positive reference Negative reference method (R+) method (R-) Positive alternative Positive agreement (A+/R+) Positive deviation (R-/A+) Simplified method (A+) PA =24 PD = 5 conventional tests Negative alternative Negative deviation (A-/R+) Negative agreement (A-/R-) method (A-) ND = 1 (PPND = 0) NA = 32 (PPNA = 0) Positive alternative Positive agreement (A+/R+) Positive deviation (R-/A+) method (A+) PA =24 PD = 5 Negative alternative Negative deviation (A-/R+) Negative agreement (A-/R-) method (A-) ND = 1 (PPND = 0) NA = 32 (PPNA = 0) Responses VIDAS CAM Calculation of relative accuracy (AC), relative specificity (SP) and relative sensitivity (SE) All previous results were used to calculate the relative accuracy, relative sensitivity and relative specificity of each category, according to the EN ISO 16140 standard. The results obtained whatever the confirmatory tests used are summarised in Table 6. ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 9/78 December 29, 2016 bioMérieux Table 6 Category PA Poultry Products Other meat product Environmental samples TOTAL NA ND PD Sum N Relative accuracy AC (%) [100x(PA+NA])/N N+ PA + ND Relative sensitivity SE (%) [100xPA]/N+ N- Relative specificity NA + PD SP (%) [100xNA]/N- 31 28 0 5 64 92.2 31 100.0 33 84.8 28 49 1 4 82 93.9 29 96.6 53 92.5 24 32 1 5 62 90.3 25 96.0 37 86.5 83 109 2 14 208 92.3 85 97.6 123 88.6 The alternative method percentage values calculated for the following three criteria according to the ISO 16140 (2003) standard are: Relative accuracy: AC Relative specificity : SP Relative sensitivity : SE 92.3% 88.6% 97.6% Taking into account the positive deviations of the alternative method, the sensitivity of both methods is presented below: Alternative method: (PA + PD) / (PA + PD + ND) 98.0% Reference method: (PA + ND) / (PA + PD + ND) 85.9% Analysis of discordant results Negative deviations: 2 Sample n° Product Contamination P18 Sweet bread meat Artificial C. jejuni PRA3L1E4B3 (31 CFU/25 g) S6 Process water Artificial C. jejuni BRA9L1E7K1 (7.2 CFU/25 g) ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 10/78 December 29, 2016 bioMérieux Positive deviations: 14 Sample n° Product Contamination E1 Chicken leg Natural G6 Chicken leg Natural G4 Rinsing carcass Natural A4 Chicken neck skin Natural C. jejuni sups jejuni A6 Chicken neck skin Natural C. jejuni sups jejuni M2 Lamb meat Artificial Cross contamination N11 Veal meat Artificial Cross contamination Q10 Pork meat Artificial C. coli PRA3L1E12B3 (7 CFU/25 g) Q9 Pork meat Artificial C. coli PRA3L1E12B3 (7 CFU/25 g) P9 Process water Artificial Cross contamination N14 Chicken taking Natural N2 Scraps from tub Natural N4 Scraps from hen workshop Natural O1 Scraps from chicken Natural According to Annex F of the ISO 16140 standard, the statistical test is: Y = ND + PD = 2 + 14 = 16 m=2 M=3 m < M, the two methods are considered different but clearly in favour of the alternative method. Comments on confirmations The characteristic colonies were confirmed: - Without a purification step, 1 to 5 characteristic colonies, isolated or not, were tested by the VIDAS CAM test to confirm the presence of Campylobacter spp. and ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 11/78 December 29, 2016 bioMérieux - From isolated colonies, by the tests described in the ISO method, in the cases where the colonies where not isolated, purification steps were undertaken. A minimum of 48 h incubation of Columbia blood agar plates was required prior confirmation, in order to produce sufficient biological material. 3.1.1.2 Relative detection level The relative detection level is the smallest number of culturable micro-organisms that can be detected in the sample in 50% of occasions by the alternative and reference methods. Three « food matrix/strain» pairs were tested in parallel with the reference method and the alternative method. The artificial contaminations were carried out according to ISO 16140 and the NF Validation technical rules. The levels of detection, calculated according to the Spearman – Kärber method (LOD50), were the following: Table 7 – Relative detection level results Matrix Strain Relative detection level (CFU / 25 g or 25 m) according to Spearman-Kärber test1 Reference method Alternative method Poultry meat Campylobacter jejuni 0.9 [0.3 – 2.4] 0.7 [0.3 – 1.8] Pork Campylobacter jejuni 0.9 [0.4 – 1.8] 0.9 [0.4 – 1.8] Process water Campylobacter coli 0.3 [0.2 – 0.4] 0.3 [0.2 – 0.4] The detection levels vary from 0.2 to 2.4 CFU/25 g for the reference method and from 0.2 to 1.8 CFU/25 g for the alternative method. 1 "Hitchins A. Proposed Use of a 50 % Limit of Detection Value in Defining Uncertainty Limits in the Validation of Presence-Absence Microbial Detection Methods, Draft 10th December, 2003". ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 12/78 December 29, 2016 bioMérieux 3.1.1.3 Inclusivity / exclusivity Inclusivity is the ability of the alternative method to detect the target analyte from a wide range of strains. Exclusivity is the lack of interference from a relevant range of non-target strains of the alternative method. The inclusivity and the exclusivity of the alternative method were determined using 50 positive strains and 30 negative strains. Protocols - Inclusivity: Campylobacter strains cultures were performed in CFB. Dilutions were done in order to inoculate 10 to 100 cells/225 ml CFB (incubation 48 h at 41.5°C in microaerobic conditions). Ten µl of CFB enrichment were then streaked onto CFA plate, incubated for 24 h ± 4 h at 41.5°C in microaerobic conditions. - Exclusivity: Negative strains were inoculated at 105 CFU/ 225 ml nutrient broth in aerobic conditions for 24 h at 37°C. Ten microliters of the enrichment broth were then streaked onto CFA plates incubated for 44 h ± 4 h at 41.5°C in microaerobic conditions. Note: C. fetus is a part of the Campylobacter genus, but does not grow at 41.5°C. The protocol for Campylobacter fetus strains was the same as the one used to study inclusivity, but incubation temperature was 25.0°C instead of 41.5°C. Results and conclusion The results are presented in Appendix 5. All the 52 strains of Campylobacter tested (C. coli, C. jejuni, C. upsaliensis, C. lari), produced characteristic colonies on CFA: red orange-coloured in red Bordeaux, with sometimes a metallic sheen. The 2 strains of C. fetus were characteristic when incubated at 25°C, but did not grow when incubated at 41.5°C. ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 13/78 December 29, 2016 bioMérieux The 30 non Campylobacter spp strains did not grow or did not give characteristic colonies, except in 4 cases. Colonies of 3 strains were coloured in red Bordeaux, with irregular edges: - Enterobacter cloacae (EN16), - Escherichia coli (accuracy assay), - Acinetobacter baumanii (reference 40). Aeromonas hydrophila, isolated during the accuracy study, gave purplish red colonies without metallic sheen on CFA. 3.1.2 Practicability Practicability is described according to the technical rules of the NF Validation: 1.Packaging (See kit insert) 2.Reagent volumes (See kit insert and vial packaging) 3. Storage conditions (See kit insert) – Shelf life of not opened products (See kit insert) 4. Modalities of use after first use (See kit insert) 5. Required equipments (See kit insert) 6. Reagents (See kit insert) 7. Training ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) CFB (reference 42 643): Broths are packaged in 10 × 225 ml minibags CFB (reference 42 642): Broths are packaged in 10 × 90 ml minibags CFA (reference 43 471): Plates are packaged in 2×10 plates of 90 mm diameter. The CFB minibags must be stored at 2-8°C in their box until the expiration date, protected from light. The plates must be kept between +2°C and +8°C. The expiration date is shown on each vial. The CFB minibags must be stored at 2-8°C in their box until the expiration date, protected from light. The plates must be kept between +2°C and +8°C in their box up to expiration date. Normal configuration and common material of a laboratory of microbiology. Necessary equipment: 1) Combibag + microaerobic atmosphere generator 2) Or jar and GENbox microaer, GENbag microaer, GENbox Jar, microaerobic atmosphere generators, 3) Blender or equivalent 4) Air incubator at 41.5°C ± 1°C 5) Air incubator at 25.0°C ± 1°C / For an operator trained in standard techniques of microbiology, training requires less than 1 day. 14/78 December 29, 2016 bioMérieux 8. Real time handling – Flexibility of the technique relative to the number of samples to be analysed Steps Sampling, dilution in CFB and stomaching Sampling, dilution in BOLTON broth and stomaching Streaking on CFA Streaking on mCCDA and 2nd agar Agar readings and typical colonies selection Average total time (per sample) Average time for a sample (min) EN ISO 10272-1 CFB/CFA Standard method / 7 Average time for 20 samples (min) EN ISO 10272-1 CFB/CFA Standard method 60 7 / 60 / 1 2 10 min 1 / 10 15 5 min 1 9 min 8 / 12 4 min These times correspond to negative samples for which no confirmation is necessary. In the case of positive samples, it is necessary to add the time required for the confirmations. The value of the alternative method is the screening of the negative samples and the confirmation procedure. Furthermore, time of manipulations is reduced in comparison to the reference method. 9. Time to result Step Realization of pre-enrichment Streaking on selective media in a microaerobic atmosphere Streaking on CFA Reading the plates Negative results (if no characteristic colony) Confirmation by reference method tests : GRAM, motility, oxidase, microaerobic growth at 25.0°C, aerobic growth at 41.5°C, including purification Simplified confirmation tests : conventional method Confirmation tests : VIDAS CAM test from colony isolate or no Negative results (after negative confirmation if necessary) Positive results - Confirmation by the reference method tests, including purification Confirmation by VIDAS CAM test from colony isolate or no Confirmation by the latex assay 10. Technician skills 11. Steps common to the reference method Time (Day) EN ISO 10272-1:2006 standard D0 / D2 D2 D3 to D4 / D4 D4 D4 D6 to D7 D6 to D8 D6 to D7 / J4 / D4 to D7 D6 to D8 D6 to D7 D6 to D8 D4 (to D6 purification) / D4 (to D6 purification) / Staff trained in microbiology. Level identical to that for the reference method Confirmations (option 1) 12. Traceability / 13. Maintenance / ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) Time (Day) CFB/CFA method D0 15/78 December 29, 2016 bioMérieux 3.1.3 Inter-laboratory study (IPL, 2010) The aim of the interlaboratory study is to determine the variability of the results obtained in different laboratories using identical samples and to compare these results with those obtained in the methods comparison study. 3.1.3.1 Study organization 17 laboratories were involved. The tested matrix was a poultry minced meat inoculated with Campylobacter jejuni (origin “turkey”). 24 samples per method were prepared with 3 inoculation levels (8 samples per level for each method). 3.1.3.2 Control of experimental parameters Before artificial contamination The non contaminated meat was analyzed according to the EN ISO 102721:2006 reference method to check the absence of Campylobacter spp. None of the 25 g samples contained Campylobacter spp. The MPN enumeration of Campylobacter was carried out by preparing 3 dilutions, 3 tubes per dilution in CFB, streaking on mCCDA and CFA. The result was < 3 CFU / 25 g. The total viable count at 30°C was estimated to be 1.5 106 CFU/g. Stability of the inoculated samples - Samples stability Preliminary assays demonstrated stability of Campylobacter spp in the poultry meat, under the conditions used in the study. - Contamination rate after artificial inoculation The following table shows the contamination rates obtained and estimated precisions: ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 16/78 December 29, 2016 bioMérieux Level Samples Level 0 (L0) Low level (L1) High level (L2) 5-6-9-10-13-14-19-20 27-28-35-36-41-42-43-44 3-4-11-12-17-18-23-24 29-30-31-32-39-40-45-46 1-2-7-8-15-16-21-22 25-26-33-34-37-38-47-48 Targeted theoretical level (CFU/25g) Real level (CFU/25g) Confidence intervals 0 0 / 3 4.4 [1.2; 11.2] 30 26.0 [17.0; 38.2] Sample delivery The temperature curves obtained by the temperature probe show that temperatures were stable during the delivery, excepted for 4 laboratories (I, J, L and P) (See table 8). Table 8 - Sample temperatures at receipt Laboratory A B Temperatures at receipt (°C) Measured by Measured by the the laboratory temperature probe 5.5 4.5 4.6 4.0 C 6.5 0.0 D E 7.6 5.8 5.0 5.5 F 5.0 1.2 G H I J K L M N O 1.0 5.0 14.4 13.0 8.5 9.0 8.0 7.8 7.8 3.6 7.3 14.3 13.1 7.8 8.7 7.5 6.6 8.0 P 10.0 9.1 Q 8.2 5.1 ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 17/78 Comments Reception at D1 (11am), but samples analyses at D2 Reception at D1 (11am), but samples analyses at D2 Reception at D2 Reception at D2 Reception at D1 (at midday), and samples analyses at D2 December 29, 2016 bioMérieux 3.1.3.3 Conclusion Of the 17 laboratories, 6 were excluded due to the temperature which was out of range during shipment (Laboratories I, J and L), package received at D2 (laboratories I and J) or samples received at D1 but analysed at D2 (laboratories C, F and P). The results of 11 laboratories were used in the interpretation. 3.1.3.4 Results Enumeration of aerobic mesophilic flora The results of enumerations varied between 2.9 107 and 1.1 109 CFU/g. Results obtained by the collaborative laboratories The detailed results are presented in Appendix 6 and the following Tables give a summary for all the laboratories. Table 9 - Positive results obtained with the reference method Levels of contamination Laboratory L0 L1 L2 Positive results Total samples Positive results Total samples Positive results Total samples A 0 8 0 8 0 8 B 0 8 6 8 8 8 C 0 8 0 8 0 8 D 2 8 3 8 5 8 E 6 8 6 8 4 8 F / / / / / / G 4 8 1 8 5 8 H 0 8 1 8 7 8 I / / / / / / J 0 8 0 8 0 8 K 0 8 0 8 0 8 L 5 8 5 8 6 8 M 3 8 4 8 6 8 N 0 8 0 8 0 8 O 0 8 1 8 1 8 P 0 8 0 8 0 8 Q 0 8 1 8 5 8 Total 15 88 23 88 41 88 selected laboratories (a) (b) (c) ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 18/78 December 29, 2016 bioMérieux Table 10 - Positive results obtained with the alternative method Levels of contamination Laboratory L0 L1 L2 Positive results Total samples Positive results Total samples Positive results Total samples A 2 8 8 8 8 8 B 0 8 8 8 8 8 C 2 8 8 8 8 8 D 0 8 8 8 8 8 E 0 8 8 8 8 8 F / / / / / / G 2 8 8 8 8 8 H 0 8 8 8 8 8 I / / / / / / J 4 8 8 8 8 8 K 0 8 8 8 8 8 L 0 8 5 8 6 8 M 1 8 7 8 8 8 N 1 8 8 8 8 8 O 1 8 7 8 8 8 P 1 8 8 8 8 8 Q 0 8 8 8 8 8 Total 7 88 86 88 88 88 selected laboratories (a) (a): False positive (b) (b): True positive at level 1 (c) (c): True positive at level 2 Conclusion The results of 11 laboratories were finally taken into account for the statistical analysis. Results of the CFB – CFA method Off the 176 spiked samples 174 were found positive with the CFA method and 2 at level L1 were found negative (Lab M and O). ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 19/78 December 29, 2016 bioMérieux Five of the 11 laboratories (A, G, M, N and O) found 1 or 2 positives among the non inoculated samples. Results of the standard method Off the 176 spiked samples 64 were found positive with the reference method and 112, 65 at level 1 and 47 at level 2, were found negative. Three of the 11 laboratories (A, K, N) did not find Campylobacter spp whatever the contamination level due to the background microflora level. Four of the 11 laboratories (D, E, G, and M) showed positive results for some non inoculated samples. For the ISO method, the Campylosel agar was used in addition to the mCCD agar. Most of the plates showed the following characteristics: - Characteristic macroscopic colonies on mCCDA found negative after confirmation. - And, no characteristic colonies, strongly hemolytic or not on Campylosel. Further investigations were done by the expert laboratory. Strains of Escherichia coli were identified and studied for their resistance to antibiotics. These strains presented a -phenotype lactamines - -lactamase explaining their growth. The high background flora, consisted of multi-resistant Escherichia coli and lactic flora, normally inhibited in the Bolton broth and on selective agars of Campylobacter spp. was able to grow and inhibit and\or hide the presence of Campylobacter spp. Note: the CampyFood Broth and CampyFood Agar appeared to be more selective towards the background flora. ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 20/78 December 29, 2016 bioMérieux 3.1.3.5 Calculations The results of 11 laboratories were considered. Note: the positive results of the alternative method were all confirmed. Specificity (% SP) and Sensitivity (%SE) The percentages of specificity (SP) and sensitivity (SE) were calculated according to the EN ISO 16140. For the L0 level and for each method, specificity percentages are calculated according to: FP SP 1 x 100% N with: N- = total number of all L0 assays FP = number of false positive results For each contamination level and each method, the sensitivity percentages are calculated according to: TP x 100% N with: N+ = total number of all L1 or L2 assays TP = number of true positive results SE The results are given in the Table 11. Table 11 – Interpretation Reference method SP/SE Alternative method SP/SE L0 L1 SP% = 83.0 SE% = 26.1 SP% = 92.1 SE% = 97.8 L2 L1+L2 SE% = 46.6 SE% = 36.4 SE% = 100.0 SE% = 98.9 Level ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 21/78 December 29, 2016 bioMérieux Relative accuracy (AC) Relative accuracy (AC) (PA NA) AC x 100% N (in %) is calculated according to: with: N = number of samples analysed PA = number of positive agreement NA = number of negative agreement The results for all the samples are presented below. Table 12 - Paired results of the alternative and reference methods Positive reference Negative reference method (R+) method (R-) Positive alternative Positive agreement (A+/R+) Positive Deviation (R-/A+) method (A+) PA = 67 PD = 114* Negative alternative Negative deviation (A-/R+) Negative agreement (A-/R-) method (A-) ND = 12* NA =71 Total (N+) = 79 (N-) = 185 Responses Total (N+) = 181 (N-) = 83 N = 264 * None of the presumptive positive samples were negative after confirmation The alternative method accuracy values with regard to the reference method are shown in Table 13 Table 13 – Interpretation ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) Level AC % Level L0 81.8 Level L1 28.4 Level L2 46.6 Level L1 + L2 37.5 Total 52.3 22/78 December 29, 2016 bioMérieux Analysis of discordances As defined in Annex F of the ISO 16140 standard, the McNemar test was used: ² = d2/(PD+ND) Number of discordances d minimal ² Conclusion 126 114 – 12 = 102 (102×102)/126 = 83 No Equivalence Both methods were not considered as equivalent as ² > 3.84 (Annex F), in favor of the alternative method. 3.1.3.6 Interpretation Relative accuracy (AC), specificity (SP) and sensitivity (SE) values The values obtained in the two parts of the validation study are given in the following Table: Inter-laboratory study Comparative study Relative accuracy (AC) 52.3 % 92.3 % Sensitivity (SE) 98.9 % 97.6 % Specificity (SP) 92.1 % 88.6 % The values obtained through the inter-laboratory study and the preliminary study are different. The calculations of the sensitivity of both methods taking into account all confirmed positives (true positive results) are: Alternative method Reference method (PA + PD) / (PA + PD + ND) = 93.8 % (PA + ND) / (PA + PD + ND) = 40.9 % ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 23/78 December 29, 2016 bioMérieux Accordance (DA) Accordance values for both methods are found in Table 14 (See Appendix 7 for the raw data). Table 14 – Interpretation Level Reference method Alternative method L0 DA % = 84 % DA % = 87 % L1 DA % = 76 % DA % = 96 % L2 DA % = 75 % DA % = 100 % Concordance Both methods concordance values are found in Table 15 (See Appendix 8 for the raw data). Table 15 – Interpretation Level Reference method Alternative method L0 Concordance % = 70.5 % Concordance % = 82.5 % L1 Concordance % = 59.9 % Concordance % = 95.5 % L2 Concordance % = 47.7 % Concordance % = 100 % Odds Ratio (COR) The odds ratio value is determined according to: COR Accordance x 100 condorcance Concordance x (100 accordance ) Both method odds ratio values are: Table 16 – Interpretation Level Reference method Alternative method L0 COR = 2.20 COR = 1.42 L1 COR = 2.12 COR = 1.13 L2 COR = 3.29 COR = 1.00 ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 24/78 December 29, 2016 bioMérieux A value of 1.00 for the Odds ratio means that accordance and concordance are equal. When the Odds ratio increases, the inter-laboratory variation becomes more predominant. 3.1.4 Conclusion The method comparative study conclusions are: The alternative method showed satisfying relative accuracy, specificity and sensitivity. It allowed a better recovery of Campylobacter with 14 positive deviations and 2 negative deviations. The relative detection limits of the alternative method and the ISO standard were similar. The alternative method showed clearly satisfying inclusivity and exclusivity results. The inter-laboratory study conclusions are: The inter-laboratory study showed that the alternative method is more sensitive than the reference method. 3.2 Extension study (ADRIA Développement - 2014) An extension study was conducted in 2014 by ADRIA Développement in order to use a latex test for positive results confirmations. 3.2.1 Protocol One hundred and fifty two positive strains and one hundred and one negative strains were tested. The study protocol is described in Appendix 9. 3.2.2 Results The raw data are provided in Appendix 10 for the inclusivity study and in Appendix 11 for the exclusivity study. ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 25/78 December 29, 2016 bioMérieux Inclusivity Inclusivity results are summarized in Table 17. Table 17 - Inclusivity results COS 140 12 12 0 0 152 Positive latex test using one colony Negative latex test using one colony Positive test using a minimum of 2 colonies Negative latex test No growth Total number of tested colonies * 144 145 146 147 148 CampyFood 138 9 9 0 5 (144-145-146-147-148) * 152 Campylobacter upsaliensis Ad1139 Campylobacter upsaliensis ATCC43954 Campylobacter upsaliensis ATCC49815 Campylobacter upsaliensis ATCC49816 Campylobacter upsaliensis CIP103681 - Latex tests realised on colonies isolated on Columbia blood Agar: * All the positive strains gave a positive latex test when grown on Columbia blood agar. * For 12 strains, it was necessary to test a pool of 2 or 3 colonies to obtain a positive latex test. - Latex tests realised on colonies on CFA: * 5 Campylobacter upsaliensis strains did not grow onto CFA plates. * For 9 strains, it was necessary to test a pool of 2 or 3 colonies to have a positive latex test. Exclusivity The 101 tested negative strains gave a negative VIDAS test after subculture in a non selective broth, except the 2 strains of Campylobacter fetus. When streaked onto Columbia blood Agar, 2 strains gave a positive or doubtful latex test (Aeromonas hydrophila CIP 74.30 and Chryseobacterium ureilyticum Ad 1340). 20 strains were able to grown on CampyFood agar; 11 of them gave doubtful colonies, and all gave a negative latex test. ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 26/78 December 29, 2016 bioMérieux 3.3 Extension study (ADRIA Développement, 2016) The aim of the study was to assess the inclusivity and exclusivity of the new confirmation procedure. 3.3.1 Protocol 150 positive and 100 negative strains were tested. The protocol applied for the extension study is described in Appendix 12. 3.3.2 Results The raw data are provided in Appendix 13. An example of the results provided by the software for a target strain and a non target strain is also given in Appendix 13. 3.3.2.1 Inclusivity One hundred and fifty strains were tested; one colony and one spot were tested per strain. All the strains gave typical colonies on CampyFood Agar (CFA) plates and all were confirmed as Campylobacter spp. with the VITEK MS, except in one case (strain No 51). An example of result provided by the VITEK MS is given page 74. After isolation on Columbia Blood Agar (COS); all the strains were confirmed as Campylobacter. The results are summarised in table 18. Table 18 Media Number of strains tested Number of strains confirmed as Campylobacter spp. Number of strains not confirmed as Campylobacter spp. Number of strains with no confirmation ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) CFA 150 COS 150 149 150 0 0 1 (Campylobacter coli Ad 1939) 0 27/78 December 29, 2016 bioMérieux 3.3.2.2 Exclusivity None of the 100 tested strains were confirmed as Campylobacter with the VITEK MS. An example of result provided by the VITEK MS is given page 78. A summary of the results is given Table 19. Table 19 Media CFA COS 100 100 78 0 22 / 0 13 0 0 Number of strains tested Number of strains which did not grow on the plate Number of strains characteristic on the plates Number of strains with no result Number of strains confirmed as Campylobacter spp. As already mentioned, the technology is here dedicated to Campylobacter spp confirmation. Strains identification is of course related to the extension and the robustness of the database, and is not the purpose of the study. Indeed, all the negative strains were either not able to grow on the tested agars, or not confirmed as Campylobacter spp with the VITEK® MS. 3.3.3 Conclusion All the 150 tested Campylobacter strains were confirmed as Campylobacter spp, except in one case for which a “no result” was obtained when the colony was picked up from CFA. Among the 100 tested negative Campylobacter genus was observed. strains, no confirmation as VITEK® MS is an accurate and rapid technology to confirm a positive presumptive colony isolated on the CampyFood agar. The technology is dedicated to Campylobacter spp confirmation, and is not supposed to be used for further sub-species discrimination, serotying or identification. The software version used for the study was the V3.1. ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 28/78 December 29, 2016 bioMérieux Appendix 1 – Flow diagram of the alternative method CampyFood ID Agar Detection 25 g sample + 225 ml CFB (CampyFood broth) in Combibag Incubation for 48 h ± 4 h at 41.5°C ± 1°C Streaking onto CampyFood Agar (CFA) plates Incubation for 44 h ± 4 h at 41.5°C ± 1°C Presence of characteristic colonies Confirmation: - Tests described in the reference method - VIDAS CAM on isolated colonies - Test VITEK® MS on isolated colonies ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 29/78 December 29, 2016 bioMérieux Appendix 2 – Flow diagram of the reference method EN ISO 10272-1 (April 2006): Microbiology of food and animal feeding stuffs. Horizontal method for detection and enumeration of Campylobacter spp. Part 1: detection method Pre-enrichment: BOLTON supplemented (at ambient temperature) 1/10 dilution Homogenization Incubation for 4 h to 6 at 37°C 1°C, and 44 h 4 h at 41.5°C in microaerobic conditions Streaking 10µl onto mCCDA plates and on a second media Incubation for 44 h 4 h at 41.5°C 1°C in micro aerobic conditions Presence of characteristic colonies Confirmatory tests: - Purification on Columbia Blood Agar (COS) - Microscopic observation (morphology and mobility) - Oxidase test - Growth in aerobic conditions at 41.5°C - Growth in micro aerobic conditions at 25°C ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 30/78 December 29, 2016 bioMérieux Appendix 3 – Artificial contamination (Initial validation - IPL 2010) in French Contamination artificielle Code G12 G13 G14 I2 I3 I4 I5 P11 P12 P13 P14 P15 P16 P17 P18 P19 P20 Q1 Q2 Q3 Q4 Q5 Q6 Q7 Q8 Q9 Q10 Q11 Q12 Q13 Q14 Q15 Q16 Nom Sauté de bœuf cru Filet de bœuf cru saucisse texane crue (porc) Poulet rôti Poulet rôti Poulet rôti Escalope de dinde Chipolatas aux herbes pur porc Merguez fortes à la marocaine Emincé de porc sauce toscane Jarret d'agneau Chipolatas Bavette de bœuf Côte de porc Ris de veau cœur Rognons de veau Palette fumée sans os Escalope de jambon de porc Foie de veau Langue de bœuf Côte de porc mexicaine Filet mignon de porc cuit Filet mignon de porc Filet mignon de porc Faux filet de bœuf Filet mignon de porc au curry Filet mignon de porc Viande de porc hachée Rognons de veau Poitrine fumée à l'ancienne Côte échine de porc Prélèvement table inox préparation Prélèvement table inox préparation ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) Catégorie PC2 PC1 PC2 VOL2 VOL2 VOL2 VOL1 PC2 PC2 PC3 PC1 PC1 PC1 PC1 PC1 PC1 PC3 PC3 PC1 PC1 PC2 PC3 PC1 PC1 PC1 PC3 PC1 PC2 PC2 PC3 PC1 ENV2 ENV2 N° DEA9L3 E1B1 DEA9L3 E1B1 DEA9L3 E1B1 PRA3L1 E11B1 PRA3L1 E11B1 PRA3L1 E4B1 PRA3L1 E4B1 PRA3L1E5B1 PRA3L1E5B1 PRA3L1E5B1 PRA3L1E5B1 PRA3L1E4B3 PRA3L1E4B3 PRA3L1E4B3 PRA3L1E4B3 PRA3L1E7B1 PRA3L1E7B1 PRA3L1 E10B1 PRA3L1 E10B1 PRA3L1 E10B1 PRA3L1 E10B1 DEA9L1 E7B3 DEA9L1 E7B3 DEA9L1 E7B3 DEA9L1 E7B3 PRA3L1 E12B3 PRA3L1 E12B3 PRA3L1 E12B3 PRA3L1 E12B3 PRA3L1 E3B3 PRA3L1 E3B3 PRA3L1 E3B3 PRA3L1 E3B3 Souche Nom C. jejuni C. jejuni C. jejuni C. jejuni C. jejuni C. jejuni C. jejuni C. jejuni C. jejuni C. jejuni C. jejuni C. jejuni C. jejuni C. jejuni C. jejuni C. jejuni C. jejuni C. jejuni C. jejuni C. jejuni C. jejuni C.jejuni C.jejuni C.jejuni C.jejuni C.coli C.coli C.coli C.coli C.coli C.coli C.coli C.coli Origine éviscération éviscération éviscération ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille éviscération éviscération éviscération éviscération ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille 31/78 Type de stress 4 j. en aérobiose 4 j. en aérobiose 4 j. en aérobiose 6 j en aérobiose 6 j en aérobiose 6 j en aérobiose 6 j en aérobiose 4 j. en aérobiose 4 j. en aérobiose 4 j. en aérobiose 4 j. en aérobiose 4 j. en aérobiose 4 j. en aérobiose 4 j. en aérobiose 4 j. en aérobiose 4 j. en aérobiose 4 j. en aérobiose 4 j. en aérobiose 4 j. en aérobiose 4 j. en aérobiose 4 j. en aérobiose 10 j.en aérobiose 10 j.en aérobiose 10 j.en aérobiose 10 j.en aérobiose 10 j.en aérobiose 10 j.en aérobiose 10 j.en aérobiose 10 j.en aérobiose 10 j.en aérobiose 10 j.en aérobiose 10 j.en aérobiose 10 j.en aérobiose Evaluation du stress UFC/25g 0,6 0,7 0,6 0,3 nd 0,4 nd 1,5 1,5 1,5 1,5 1,5 1,5 1,5 1,5 1,8 1,8 0,34 0,34 0,34 0,34 0,52 0,52 0,52 0,52 0,84 0,84 0,84 0,84 0,62 0,62 0,62 0,62 4,0 4,0 4,0 11,0 11,0 12,0 12,0 28,0 28,0 28,0 28,0 31,0 31,0 31,0 31,0 43,0 43,0 86,5 86,5 86,5 86,5 54 54 54 54 7 7 7 7 20 20 20 20 Résultat + + + + + + + + + + + + + + FN + + + + + + + + + + PS PS + + + + + + December 29, 2016 bioMérieux Contamination artificielle Code Q17 Q18 Q19 Q20 Q21 Q22 R1 R2 R3 R4 R5 R6 R7 S1 S2 S3 S4 S5 S6 Nom Prélèvement sol Résidus sol découpe dinde Prélèvement sol Eau de process Eau de process Eau de process Prélèvement de surface inox préparation Prélèvement de surface inox préparation Eau de process Eau de process Prélèvement bac stockage Résidus bac stockage Prélèvement bac stockage Prélèvement sol Prélèvement sol Prélèvement bac stockage Résidus bac stockage Eau de process Eau de process Catégorie ENV2 ENV3 ENV2 ENV1 ENV1 ENV1 ENV2 ENV2 ENV1 ENV1 ENV2 ENV2 ENV3 ENV2 ENV2 ENV2 ENV2 ENV1 ENV1 N° PRA3L1 E6B1 PRA3L1 E6B1 PRA3L1 E6B1 PRA3L1 E6B1 PRA3L1 E7B1 PRA3L1 E7B1 DRA9L1E5K1 DRA9L1E5K1 DRA9L1E5K1 DRA9L1E5K1 DRA9L1E10K1 DRA9L1E10K1 DRA9L1E10K1 DRA9L1E2B1 DRA9L1E2B1 DRA9L1E2B1 DRA9L1E7K1 DRA9L1E7K1 DRA9L1E7K1 Souche Nom C.coli C.coli C.coli C.coli C.jejuni C.jejuni C.jejuni C.jejuni C.jejuni C.jejuni C.jejuni C.jejuni C.jejuni C.jejuni C.jejuni C.jejuni C.jejuni C.jejuni C.jejuni Origine ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille ressuage volaille Type de stress 10 j.en aérobiose 10 j.en aérobiose 10 j.en aérobiose 10 j.en aérobiose 10 j.en aérobiose 10 j.en aérobiose 10 j.en aérobiose 10 j.en aérobiose 10 j.en aérobiose 10 j.en aérobiose 10 j.en aérobiose 10 j.en aérobiose 10 j.en aérobiose 6 j en aérobiose 6 j en aérobiose 6 j en aérobiose 6 j en aérobiose 6 j en aérobiose 6 j en aérobiose Evaluation du stress UFC/25g 0,37 0,37 0,37 0,37 0,8 0,8 0,37 0,37 0,37 0,37 0,33 0,33 0,33 0,48 0,48 0,48 0,4 0,4 0,4 9,5 9,5 9,5 9,5 2,1 2,1 14,7 14,7 14,7 14,7 11,73 11,73 11,73 6,5 6,5 6,5 7,2 7,2 7,2 Résultat + + + + + + + + + + + + + + + + FN Contamination par mélange N° Echantillon M1 M2 M3 N9 N10 N11 P6 P7 P8 P9 P10 Produit Tranche de gigot d'agneau Tranche de gigot d'agneau avec os Gigot d'agneau sans os Filet de porc Filet mignon de porc Côte de veau Eau de process Eau de process Eau de process Eau de process Eau de process ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) Produit contaminant peau de cou de coquelet peau de cou de coquelet peau de cou de poule intérieur de carcasse de poule intérieur de carcasse de poulet peau de cuisse de coq peau de poulet peau de cou de poule peau de poulet peau de cou de poulet peau de poulet Quantité introduite Résultat 1g 1g 1g 1g 1g 1g contact avec 1 g macération avec 1 g macération avec 1 g macération avec 1 g macération avec 1 g PS + + PS + + PS - 32/78 December 29, 2016 bioMérieux Appendix 4 – Relative accuracy: raw data (Initial validation - IPL 2010) Total bacteria growth Ø : no growth L = Low M = Medium H = High Distribution of flora presumptive colonies = Campylobacter spp colonies A = pure culture of suspicious colonies B = mix with a majority of suspicious colonies C = mix with a minority of suspicious colonies D = mix with rare suspicious colonies E = absence of suspicious colonies (x) : x characteristic colonies of Campylobacter spp if x < 5 Conventional standardized methods tests Reference method Simplified conventional tests Alternative method Morphology Oxidase Motility BG- + + Morphology Oxidase Motility BG- + + 41.5°C microaerobic + 41.5°C microaerobic + 41,5°C aerobic 41,5°C aerobic - 25°C microaerobic 25°C microaerobic - Conclusion Result corresponding tests Campylobacter spp. Conclusion Result corresponding tests Campylobacter spp. Morphology, Oxidase detection and motility, realized only if negative growth culture in an aerobic atmosphere at 41,5°C, or in case of discordance N.B. : during the validation study, all tests have been realized, including growth/ no growth test at 25°C in a microaerobic atmosphere ND: Negative deviation PD: Positive deviation CA: Artificial contamination of samples PA: Positive agreement NA: Negative deviation Cat. : category of products POUL : poultry products MP : other meat products EN : environment samples ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 33/78 December 29, 2016 bioMérieux POULTRY PRODUCTS Reference method EN ISO 10272-1 Code Sample Cat. CA Confirmation mCCDA Butzler Morphology Oxidase Motility 25°C microaerobic 41.5°C aerobic Alternative method CampyFood Agar method Confirmations from CampyFood Agar (CFA) Final result Growth RFV VT Final result (CFA VIDAS CAM) Agreement Comments Conventional tests Final result (conventional CFA) Agreement A2 Chicken with skin POUL1 No +HA +HA BG- + + - - + +HA 10227 2.14 + + PA + + PA A5 Chicken POUL1 No +HA +HA BG- + + - - + +MA 10958 2.29 + + PA + + PA B3 Chicken leg POUL1 No -HE -ME / - / + + - Ø / / / - PA / - NA B4 B5 C2 C3 C4 C6 D3 E1 Chicken fillet Chicken breast Chicken with skin Chicken wing Chicken leg Chicken with skin Sauté of duck Chicken leg POUL1 POUL1 POUL1 POUL1 POUL1 POUL1 POUL1 POUL1 No No No No No No No No +MB +LB -HE +HB -HE +HB Ø -HB +MB +LB -HE +HB -HE +HB Ø -HB BGBG/ BG/ BG/ BG- + + / + / + / + + + / + / + / / / / / + / / / + + + + + - +MB +MB -LB +MC -ME +LA Ø +MB 11847 10308 226 10358 / 11197 / 617 2.38 2.07 0.04 2.08 / 2.25 / 0.12 + + + / + / + + + + + + PA PA NA PA NA PA NA PD + + + + / + / + + + + + + PA PA NA PA NA PA NA PD E3 Chicken tenderloin POUL1 No -MB -MB BG- + / + + (E.coli) -LA 386 0.08 - - NA - - NA F1 F2 F3 Chicken tenderloin Chicken tenderloin Chicken leg POUL1 POUL1 POUL1 No No No -ME +MB -ME -ME +MB -ME BGBG/ + / + / + / + / + - -ME +MB -Me(Ec) 224 9940 / 0.04 2.08 / + / + - NA PA NA / + - NA PA NA G2 Chicken leg POUL1 No +HB +HB BG- + + - - + +MB 229 9931 0.04 2.04 + + PA + + PA G6 G9 H2 H3 H4 H5 POUL1 POUL1 POUL1 POUL1 POUL1 POUL1 No No No No No No -LE -HE -ME +HB +MB +MC -LE -HE -ME +HB +MB -ME / / / BGBGBG- / / / + + + / / / + + + / / / - / / / - + + + +MA Ø -LE +MB +MB +MB 10968 / / 9452 8678 9432 2.26 / / 2.07 1.9 2.06 + / / + + + + + + + PD NA NA PA PA PA + / / + + + + + + + PD NA NA PA PA PA POUL1 No -HE -ME / / / / / - Ø / / / - NA / - NA H8 I1 I5 I6 I9 Chicken leg Chicken leg Chicken wing Chicken tenderloin Duck filets Chicken tenderloin Chicken wing with paprika Chicken tenderloin Sauté of turkey Turkey breast Sauté of turkey Turkey breast POUL1 POUL1 POUL1 POUL1 POUL1 No Yes Yes No No Ø +HA +HB Ø -LE Ø +HB +HB Ø -LE / BGBG/ / / + + / / / + + / / / / / / / / + + - Ø +HA +MA Ø Ø / 11629 11279 / / / 2.54 2.47 / / / + + / / + + - NA PA PA NA NA / + + / / + + - NA PA PA NA NA L6 Giblets of poultry POUL1 No Ø Ø / / / / / - Ø / / / - NA / - NA D6 Roasted chicken POUL2 No Ø Ø / / / / / - Ø / / / - NA / - NA D7 F5 POUL2 POUL2 No No Ø Ø Ø -HE / / / / / / / / / / - Ø Ø / / / / / / - NA NA / / - NA NA POUL2 No Ø Ø / / / / / - Ø / / / - NA / - NA F13 H11 I2 I3 I4 I7 I8 J6 L4 Roasted chicken Roasted chicken Roasted, badly cooked chicken Chicken in the juice Roasted chicken Roasted chicken Roasted chicken Roasted chicken Roasted chicken Roasted chicken Roasted chicken Gizzards of poultry POUL2 POUL2 POUL2 POUL2 POUL2 POUL2 POUL2 POUL2 POUL2 No No Yes Yes Yes No No No No Ø Ø +HA +HA +HA Ø Ø Ø +HB Ø Ø +MB +HB +HA Ø Ø Ø +HC / / BGBGBG/ / / BG- / / + + + / / / + / / + + + / / / + / / / / / - / / / / / - + + + + Ø Ø +HA +HA +HA Ø Ø Ø +MB / / 11684 11312 11645 / / / 9647 / / 2.55 2.47 2.55 / / / 1.91 / / + + + / / / + + + + + NA NA PA PA PA NA NA NA PA / / + + + / / / + + + + + NA NA PA PA PA NA NA NA PA L5 Chicken livers POUL2 No Ø Ø / / / / / - Ø / / / - NA / - NA H6 F6 ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 34/78 Molecular identification C.jejuni subsp. jejuni Ref. method : E. coli December 29, 2016 bioMérieux POULTRY PRODUCTS Reference method EN ISO 10272-1 Code Sample Cat. CA Confirmation mCCDA Butzler Morphology Oxidase Motility 25°C microaerobic 41.5°C aerobic Alternative method CampyFood Agar method Confirmations from CampyFood Agar (CFA) Final result Growth RFV VT Comments Final result (CFA VIDAS CAM) Agreement Conventional tests Final result (conventional CFA) Agreement G4 G5 G8 H9 H10 L1 L2 L3 A1 A3 A4 A6 Rinsing carcass Rinsing carcass Rinsing carcass Rinsing carcass Rinsing carcass Rinsing carcass Rinsing carcass Rinsing carcass Skin of chicken neck Skin of chicken Skin of chicken neck Skin of chicken neck POUL3 POUL3 POUL3 POUL3 POUL3 POUL3 POUL3 POUL3 POUL4 POUL4 POUL4 POUL4 No No No No No No No No No No No No -ME +MB +MB +MB +MB +MC +LC +MB +MB +HA +HB +MB -ME +MB +MB -ME -ME -LE +LC +MB +MA +HA +HB +MB / BGBGBGBGBGBGBGBGBGBGBG- / + + + + + + + + + - / + + + + + + + + - / + + / + + + + + + + + + + + - +LB +LB +MA +MB +MB +HA +MA +MA +HA +MA +HA +MA 10102 11422 8978 9330 9678 11253 9400 10414 10402 214 11356 9808 2.08 2.35 1.85 2.04 2.12 2.23 1.86 2.06 2.18 0.04 2.38 2.05 + + + + + + + + + + + + + + + + + + + + + + PD PA PA PA PA PA PA PA PA PPNA PD PD + + + + + + + + + + + + + + + + + + + + + + + PD PA PA PA PA PA PA PA PA PPNA PD PD B1 Skin of chicken neck POUL4 No -HE -LE BG+ - / + + - +LA (2) 223 0.04 - - PPNA - - PPNA B2 C1 C5 F4 G1 G7 H1 Skin of chicken neck Skin of chicken neck Skin of chicken neck Skin of chicken Skin of chicken neck Skin of chicken neck Skin of chicken POUL4 POUL4 POUL4 POUL4 POUL4 POUL4 POUL4 No No No No No No No +HB +HB +HB -HE +HC +MB -HE +MB +HB +HB -HE +HB -ME -HE BGBGBG/ BGBG/ + + + / + + / + + + / + + / / / / / + + + + + - +HA +MB +MA Ø +MB +MA -LE 11412 11477 11303 / 11585 11907 / 2.29 2.31 2.27 / 2.38 2.45 / + + + / + + / + + + + + - PA PA PA NA PA PA NA + + + / + + / + + + + + - PA PA PA NA PA PA NA H7 Skin of chicken neck POUL4 No +HB +HC BG- + + - - + +MB 9021 1.97 + + PA + + PA ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 35/78 Molecular identification C.jejuni subsp. jejuni Molecular identification C.jejuni subsp. jejuni Lactobacillus December 29, 2016 bioMérieux OTHER MEAT PRODUCTS Reference method EN ISO 10272-1 Code Sample Cat. CA Confirmation mCCDA Butzler Morphology Oxidase Motility 25°C microaerobic 41.5°C aerobic Alternative method CampyFood Agar method Confirmations from CampyFood Agar (CFA) Final result Growth RFV VT Final result (CFA VIDAS CAM) Agreement Conventional tests Final result (conventional CFA) Agreement B6 Pork chop MP1 No Ø Ø / / / / / - Ø / / / - NA / - NA C7 Rib eye steak of ox MP1 No Ø Ø / / / / / - Ø / / / - NA / - NA D1 Deep-frozen minced beef MP1 No Ø Ø / / / / / - -ME / / / - NA / - NA D2 Deep-frozen minced beef MP1 No Ø Ø / / / / / - Ø / / / - NA / - NA D5 Slice of bovine meat MP1 No Ø Ø / / / / / - Ø / / / - NA / - NA D10 Sliced thinly by pork MP1 No Ø Ø / / / / / - Ø / / / - NA / - NA E2 Pork chop MP1 No Ø Ø / / / / / - Ø / / / - NA / - NA E4 Ground beef 5% fat MP1 No Ø Ø / / / / / - Ø / / / - NA / - NA E5 Ground beef 20% fat MP1 No Ø Ø / / / / / - Ø / / / - NA / - NA E6 Ground beef 5% fat MP1 No Ø Ø / / / / / - Ø / / / - NA / - NA F8 Rib steak of ox MP1 No Ø Ø / / / / / - Ø / / / - NA / - NA F9 Ground beef MP1 No Ø Ø / / / / / - Ø / / / - NA / - NA F10 Ground beef MP1 No -LE -ME / / / / / - Ø / / / - NA / - NA F11 Minced beef MP1 No -LE -LE / / / / / - Ø / / / - NA / - NA F14 Fried beef MP1 No Ø Ø / / / / / - Ø / / / - NA / - NA F15 Fried beef MP1 No Ø Ø / / / / / - Ø / / / - NA / - NA G11 Floods pork chop MP1 No +HA +HB BG- + + - - + +HA 10378 2.14 + + PA + + PA G13 Beef tenderloin MP1 Yes +HA +HB BG- + + - - + +MA 10323 2.12 + + PA + + PA J1 Ground beef MP1 No Ø Ø / / / / / - Ø / / / - NA / - NA J3 Veal cutlet MP1 No Ø Ø / / / / / - Ø / / / - NA / - NA J4 Beefsteak MP1 No Ø Ø / / / / / - Ø / / / - NA / - NA L7 Calf kidney MP1 No Ø Ø / / / / / - -LB 270 0.05 - - NA / - NA L8 Pork kidney MP1 No -HE -HE / / / / / - -HE / / / - NA / - NA M2 Slice of leg of lamb with bone MP1 Yes -LE -LE / / / / / - +HC 9336 1.85 + + PD + + PD M3 Leg of lamb without bone MP1 Yes Ø Ø / / / / / - Ø / / / - NA / - NA M4 Pork tongue MP1 No -LE -LE / / / / / - Ø / / / - NA / - NA N5 Calf kidney MP1 No +MA +HA BG- + + - - + +HA 10880 2.21 + + PA + + PA N7 Lamb kidney MP1 No Ø Ø / / / / / - Ø / / / - NA / - NA N9 Pork sirloin MP1 Yes -LB +LB BG- + + - - + +HA 10859 2.21 + + PA + + PA N10 Pork filet mignon MP1 Yes +HB +MA BG- + + - - + +HC 11097 2.26 + + PA + + PA N11 O2 O6 Veal chop Heart of ox Slice of bovine meat MP1 Yes MP1 No MP1 No -HE Ø Ø -HA Ø Ø / / / / / / / / / / / / / / / - +HC Ø Ø 10890 / / 2.21 / / + / / + - PD NA NA + / / + - PD NA NA O8 Calf kidney MP1 No -HE -HE / / / / / - -ME / / / + PA / - NA P14 Back of the knee of lamb MP1 Yes +HA +HA BG- + + - - + +HB 10192 1.98 + + PA + + PA P15 Chipolatas MP1 Yes +HA +HC BG- + + - - + +HB 9931 1.93 + + PA + + PA P16 Bib of ox MP1 Yes +HA +HA BG- + + - - + +HB 9911 1.92 + + PA + + PA P17 Pork chop MP1 Yes +HA +HB BG- + + - - + +MB 9820 1.9 + + PA + + PA P18 Sweetbread - Heart MP1 Yes +HA +LB BG- + + - - + -HE / / / - ND / - ND P19 Calf kidney MP1 Yes +HA +HA BG- + + - - + +MA 9892 1.92 + + PA + + PA Q2 Calf liver MP1 Yes +HA +HA BG- + + - - + +HA 9748 1.89 + + PA + + PA Q3 Beef tongue MP1 Yes +HA +HA BG- + + - - + +HA 9897 1.92 + + PA + + PA Q6 Pork filet mignon MP1 Yes +HB +HB BG- + + - - + +HA 11465 2.22 + + PA + + PA Q7 Pork filet mignon MP1 Yes +HA +HA BG- + + - - + +HA 10748 2.08 + + PA + + PA Q8 Sirloin of ox MP1 Yes +HA +HA BG- + + - - + +HA 11125 2.16 + + PA + + PA Q10 Pork filet mignon MP1 Yes Ø Ø / / / / / - +HA 9651 1.87 + + PD + + PD ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 36/78 December 29, 2016 bioMérieux OTHER MEAT PRODUCTS Reference method EN ISO 10272-1 Code Sample Cat. CA Q14 Rib nearly kills of pork MP1 Yes Confirmation mCCDA Butzler +HB Alternative method CampyFood Agar method Confirmations from CampyFood Agar (CFA) Final result Growth RFV VT - + +HA 10661 2.07 Morphology Oxidase Motility 25°C microaerobic 41.5°C aerobic +HB BG- + + - Final result (CFA VIDAS CAM) Agreement Conventional tests Final result (conventional CFA) Agreement + + PA + + PA C8 Bib wipes shallot MP2 No Ø Ø / / / / / - Ø / / / - NA / - NA C10 Ox balls MP2 No Ø Ø / / / / / - Ø / / / - NA / - NA D9 Ox balls MP2 No Ø Ø / / / / / - Ø / / / - NA / - NA E7 Chipolatas in herbs MP2 No Ø Ø / / / / / - Ø / / / - NA / - NA E8 Sausage meat MP2 No Ø Ø / / / / / - Ø / / / - NA / - NA E9 Chipolatas MP2 No Ø Ø / / / / / - Ø / / / - NA / - NA No F12 Rib nearly kills of pork MP2 Ø Ø / / / / / - Ø / / / - NA / - NA G12 Fried beef MP2 Yes +HB +HB BG- + + - - + +MB 10297 2.12 + + PA + + PA G14 MP2 Yes +HA +HA BG- + + - - + +HA 10843 2.23 + + PA + + PA Ø Ø / / / / / - Ø / / / - NA / - NA L9 Raw salsiccia Texas (porc) Deep-frozen minced beef with onions Leg of lamb slice Ø Ø / / / / / - Ø / / / - NA / - NA M1 Leg of lamb slice MP2 Yes -LB -LB / / / / / - -LE 280 0.05 - - NA / - NA O3 Porc belly MP2 No Ø Ø / / / / / - Ø / / / - NA / - NA O4 Ox foot MP2 No Ø -ME / / / / / - Ø / / / - NA / - NA P11 Chipolatas in herbs MP2 Yes +HC +MB BG- + + - - + +HB 11150 2.16 + + PA + + PA P12 Strong merguez sausages MP2 Yes +HA +HB BG- + + - - + +HB 10180 1.97 + + PA + + PA J5 MP2 No MP2 No Q4 Mexican pork chop MP2 Yes +HA +HA BG- + + - - + +HA 10026 1.94 + + PA + + PA Q11 Chopped pork MP2 Yes +HC +HC BG- + + - - + +HA 9856 1.91 + + PA + + PA Q12 Calf kidney MP2 Yes +HA +HA BG- + + - - + +HA 9925 1.92 + + PA + + PA C9 The moussaka MP3 No Ø Ø / / / / / - Ø / / / - NA / - NA D4 The lasagnes of ox MP3 No Ø Ø / / / / / - Ø / / / - NA / - NA D8 Rib steak cooks MP3 No Ø Ø / / / / / - Ø / / / - NA / - NA E10 Pork cooked cheek MP3 No Ø Ø / / / / / - Ø / / / - NA / - NA F7 Chicken sandwich MP3 No Ø Ø / / / / / - Ø / / / - NA / - NA G10 Roasted chicken MP3 No Ø Ø / / / / / - Ø / / / - NA / - NA J2 Sausages MP3 No Ø Ø / / / / / - Ø / / / - NA / - NA J7 Chicken sandwich MP3 No Ø Ø / / / / / - Ø / / / - NA / - NA J8 Chicken couscous MP3 No Ø Ø / / / / / - Ø / / / - NA / - NA J9 Chicken sandwich MP3 No -MA Ø / / / / / - Ø / / / - NA / - NA P13 Sliced thinly by pork wipes Tuscan MP3 Yes +HA +HB BG- + + - - + +HB 10477 2.03 + + PA + + PA P20 Smoked palette without bone MP3 Yes +HA +HA BG- + + - - + +MB 9377 1.82 + + PA + + PA Q1 Cutlet of pork's ham MP3 Yes +HA +HA BG- + + - - + +HA 9882 1.92 + + PA + + PA Q5 Pork filet mignon MP3 Yes +HB +HB BG- + + - - + +HA 11029 2.14 + + PA + + PA Q9 Pork filet mignon MP3 Yes Ø Ø / / / / / - +HA 9531 1.85 + + PD + + PD Q13 Bacon the old MP3 Yes +HA +HA BG- + + - - + +HA 10831 2.1 + + PA + + PA ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 37/78 December 29, 2016 bioMérieux ENVIRONMENTAL SAMPLES Reference method EN ISO 10272-1 Code Sample Cat. CA Confirmation mCCDA Butzler Morphology Oxidase Motility 25°C microaerobic 41.5°C aerobic Alternative method CampyFood Agar method Confirmations from CampyFood Agar (CFA) Final result Growth RFV VT Final result (CFA VIDAS CAM) Agreement Conventional tests Final result (conventional CFA) Agreement P1 Process water ENV1 No Ø Ø / / / / / - Ø / / / - NA / - NA P2 Process water ENV1 No Ø Ø / / / / / - Ø / / / - NA / - NA P3 Process water ENV1 No Ø Ø / / / / / - Ø / / / - NA / - NA P4 Process water ENV1 No Ø Ø / / / / / - Ø / / / - NA / - NA P5 Process water ENV1 No Ø Ø / / / / / - Ø / / / - NA / - NA P6 Process water ENV1 Yes -HA -HA / / / / / - Ø / / / - NA / - NA P7 Process water ENV1 Yes +HA +HC BG- + + - - + +HB 9950 1.93 + + PA + + PA P8 Process water ENV1 Yes +HB +HC BG- + + - - + +HB 9733 1.89 + + PA + + PA P9 Process water ENV1 Yes Ø Ø / / / / / - +HB 11891 2.31 + + PD + + PD P10 Process water ENV1 Yes Ø Ø / / / / / - -LE / / / - NA / - NA Q20 Process water ENV1 Yes +HA +HB BG- + + - - + +HA 10869 2.11 + + PA + + PA Q21 Process water ENV1 Yes -HE -HE / / / / / - -LE / / - - NA / - NA Q22 Process water ENV1 Yes Ø Ø / / / / / - Ø / / - - NA / - NA R3 Process water ENV1 Yes +HA +HB BG- + + - - + +HA 10770 2.24 + + PA + + PA R4 Process water ENV1 Yes +HA +HB BG- + + - - + +HA 10880 2.26 + + PA + + PA S5 Process water ENV1 Yes +HA +HA BG- + + - - + +HA 11639 2.47 + + PA + + PA S6 Process water ENV1 Yes +HA +HA BG- + + - - + Ø / / / - ND / - ND S11 Process water ENV1 No Ø Ø / / / / / - Ø / / / - NA / - NA S12 Process water ENV1 No Ø Ø / / / / / - Ø / / / - NA / - NA K1 Whole raw hen surface ENV2 No Ø Ø / / / / / - Ø / / / - NA / - NA K2 Whole raw chicken surface ENV2 No Ø Ø / / / / / - Ø / / / - NA / - NA K3 Whole raw young cockerel surface ENV2 No +HA +MB BG- + + - - + +MA 9715 1.92 + + PA + + PA K4 Whole raw chicken surface ENV2 No Ø Ø / / / / / - Ø / / / - NA / - NA N13 Chicken taking ENV2 No -HE -HE / / / / / - Ø / / / - NA / - NA N14 Chicken taking ENV2 No Ø Ø / / / / / - +HA 9536 1.94 + + PD + + PD N15 Hen taking ENV2 No Ø Ø / / / / / - Ø / / / - NA / - NA O5 Pigeon taking ENV2 No Ø Ø / / / / / - Ø / / / - NA / - NA Q15 Surface stainless table preparation ENV2 Yes +HA +HA BG- + + - - + +HA 11031 2.14 + + PA + + PA Q16 Surface stainless table preparation ENV2 Yes +HA +HA BG- + + - - + +HA 11311 2.19 + + PA + + PA Q17 Surface ground ENV2 Yes +HA +HA BG- + + - - + +HA 10710 2.08 + + PA + + PA Q19 Surface ground ENV2 Yes +HA +HA BG- + + - - + +HA 10375 2.01 + + PA + + PA R1 Surface stainless preparation ENV2 Yes +HA +HB BG- + + - - + +HA 10397 2.16 + + PA + + PA R2 Surface stainless preparation ENV2 Yes +HA +HB BG- + + - - + +HA 10466 2.17 + + PA + + PA R5 Surface tub of storage ENV2 Yes +HA +HB BG- + + - - + +HA 10765 2.24 + + PA + + PA R7 Surface tub of storage ENV2 Yes +HA +HB BG- + + - - + +HA 10084 2.09 + + PA + + PA S1 Surface ground ENV2 Yes +HA +HA BG- + + - - + +HA 100076 2.14 + + PA + + PA S2 Surface ground ENV2 Yes +HA +HA BG- + + - - + +HA 11648 2.47 + + PA + + PA S3 Surface tub of storage ENV2 Yes +HA +HA BG- + + - - + +HA 11428 2.43 + + PA + + PA S8 Surface ground ENV2 No Ø Ø / / / / / - Ø / / / - NA / - NA S9 Surface stainless preparation ENV2 No Ø Ø / / / / / - Ø / / / - NA / - NA S10 Surface stainless preparation ENV2 No Ø Ø / / / / / - Ø / / / - NA / - NA S13 Surface table ENV2 No Ø Ø / / / / / - Ø / / / - NA / - NA S14 Surface flatware ENV2 No Ø Ø / / / / / - Ø / / / - NA / - NA S15 Surface ground ENV2 No Ø Ø / / / / / - Ø / / / - NA / - NA M5 Scraps from poultry gizzard ENV3 No Ø Ø / / / / / - Ø / / / - NA / - NA ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 38/78 December 29, 2016 bioMérieux ENVIRONMENTAL SAMPLES Reference method EN ISO 10272-1 Code Sample Cat. CA Confirmation mCCDA Butzler Morphology Oxidase Motility 25°C microaerobic 41.5°C aerobic Final result Alternative method CampyFood Agar method Confirmations from CampyFood Agar (CFA) Growth RFV VT Final result (CFA VIDAS CAM) Agreement Conventional tests Final result (conventional CFA) Agreement N1 Scraps from tub with blood ENV3 No Ø Ø / / / / / - Ø / / / - NA / - NA N2 Scraps from tub with dried blood ENV3 No -HE -HE / / / / / - +HA 9512 1.93 + + PD + + PD N3 Scraps from poultry liver ENV3 No Ø Ø / / / / / - Ø / / / - NA / - NA N4 Scraps from hen workshop ENV3 No Ø Ø / / / / / - +HC 11706 2.38 + + PD + + PD N6 Scraps from chicken cut workshop ENV3 No +HB +HB BG- + + - - + +HB 10691 2.17 + + PA + + PA N8 Scraps from cock cut ENV3 No +HB +HA BG- + + - - + +HA 9945 2.02 + + PA + + PA N12 Scraps from chicken workshop ENV3 No +HB +LC BG- + + - - + +HB 9580 1.95 + + PA + + PA O1 Scraps from chicken skin of leg ENV3 No -ME -ME / / / / / - +MC 9506 1.93 + + PD + + PD O7 Scraps from chicken skin of leg ENV3 No Ø -ME / / / / / - -LE(1) / / / - NA / - NA O9 Scraps from chicken skin of leg ENV3 No -HE -HE / / / / / - -ME / / / - NA / - NA O10 Scraps from chicken skin of leg ENV3 No -HE -HE / / / / / - -ME / / / - NA / - NA O11 Scraps from chicken skin of leg ENV3 No -HE -HE / / / / / - Ø / / / - NA / - NA O12 Scraps from pigeon leg ENV3 No -ME Ø / / / / / - Ø / / / - NA / - NA Q18 Scraps from turkey cut ground ENV3 Yes +HA +HA BG- + + - - + +HA 10352 2.01 + + PA + + PA R6 Scraps from tub of storage ENV3 Yes +HA +HB BG- + + - - + +HA 10830 2.25 + + PA + + PA S4 Scraps from tub of storage ENV3 Yes +HA +HA BG- + + - - + +HA 11514 2.44 + + PA + + PA S7 Scraps from cut workshop ground ENV3 No Ø Ø / / / / / - Ø / / / - NA / - NA ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 39/78 December 29, 2016 bioMérieux Appendix 5 – Inclusivity and exclusivity: raw data (Initial validation - IPL 2010) INCLUSIVITY Reference C4 C5 C6 C7 C8 C9 C10 C11 C12 C13 C14 C15 C16 C17 C18 C19 C20 C21 C22 C23 C24 C25 C26 C27 C28 ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) Strain Campylobacter jejuni Campylobacter coli Campylobacter coli Campylobacter jejuni Campylobacter coli Campylobacter jejuni Campylobacter coli Campylobacter jejuni Campylobacter coli Campylobacter coli Campylobacter jejuni Campylobacter jejuni Campylobacter jejuni Campylobacter jejuni Campylobacter coli Campylobacter coli Campylobacter jejuni Campylobacter coli Campylobacter jejuni Campylobacter coli Campylobacter jejuni Campylobacter jejuni Campylobacter jejuni Campylobacter jejuni Campylobacter jejuni Origin Evisceration turkey Evisceration turkey Evisceration turkey Evisceration turkey Evisceration turkey Evisceration turkey Evisceration turkey Evisceration turkey Evisceration turkey Evisceration turkey Evisceration turkey Evisceration turkey Evisceration turkey Evisceration turkey Evisceration turkey Evisceration turkey Evisceration turkey Evisceration turkey Poultry ressuage Poultry ressuage Poultry ressuage Poultry ressuage Poultry ressuage Poultry ressuage Poultry ressuage 40/78 CFU/225 ml CFB CFA 60 100 120 90 130 70 110 110 120 50 100 120 130 130 5 8 30 22 4 3 18 50 45 32 32 +MA +MA +MA +MA +MA +MA +MA +MA +MA +MA +MA +MA +MA +MA +MA +MA +MA +MA +MA +MA +MA +MA +MA +MA +MA December 29, 2016 bioMérieux INCLUSIVITY Reference C29 C30 C31 C32 C33 C34 C0 C1 C2 C3 C35 C36 C37 C38 C39 C42 C43 C44 C45 C46 C47 C48 C49 C60 C61 C62 C63 ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) Strain Campylobacter jejuni Campylobacter jejuni Campylobacter jejuni Campylobacter jejuni Campylobacter jejuni Campylobacter jejuni Campylobacter jejuni s.jejunï Campylobacter jejuni s.jejuni Campylobacter jejuni s.jejuni Campylobacter jejuni s.jejuni Campylobacter jejuni Campylobacter jejuni Campylobacter jejuni Campylobacter jejuni Campylobacter lari Campylobacter upsaliensis Campylobacter jejuni doylei Campylobacter lari Campylobacter lari Campylobacter lari subsp lari Campylobacter jejuni doylei Campylobacter lari Campylobacter upsaliensis Campylobacter coli Campylobacter jejuni Campylobacter coli Campylobacter jejuni Origin Poultry ressuage Poultry ressuage Poultry ressuage Poultry ressuage Poultry ressuage Poultry ressuage Carcass of poultry Chicken cutlet Chicken skin of neck Chicken cutlet Evisceration turkey Evisceration turkey Evisceration turkey Evisceration turkey Collection Collection Collection Collection Collection Collection Collection Bordeaux hospital Bordeaux hospital Chicken ressuage Chicken ressuage Evisceration turkey Evisceration chicken 41/78 CFU/225 ml CFB CFA 40 21 40 42 55 60 30 32 40 35 40 53 55 78 37,5 19 25 125 50 75 43 40 32 31 33 30 16 +MA +MA +MA +MA +MA +MA +MA +MA +MA +MA +MA +MA +MA +MA +HA +MA +MA +HA +MA +HA +MA +MA +MA +MA +MA +MA +MA December 29, 2016 bioMérieux EXCLUSIVITY Reference Ba 1 Ba 6 Ba 17 EN 9 EN 16 EN 22 KL 38 HA 31 PS 30 PS 85 PS 86 PS 33 EN 43 ST 13 ST 20 18 40 Ec 13 S 15 CIT 23 EN 72 ESC 14 PS 12 56 58 59 Strain Bacillus cereus Bacillus mycoïdes Bacillus pumilus Enterobacter agglomerans Enterobacter cloacae Enterobacter amnigenus Klebsiella oxytoca Hafnia alvei Pseudomonas aeruginosa Pseudomonas putida Pseudomonas putida Pseudomonas fluorescens Proteus mirabilis Staphylococcus aureus Staphylococcus epidermidis Aeromonas hydrophila Acinetobacter baumanii Escherichia coli Salmonella hadar Citrobacter freundii Shigella flexneri Escherichia hermanii Pseudomonas fluorescens Acinetobacter calcoaeceticus Arcobacter cryoaerophilus Arcobacter butzleri ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) Origin Egg Collection Custard Pork belly Environment surface Jambon Collection Minced meat Mullet fillet Collection Collection Vegetables Meat product CIP 7625 Smoked salmon Collection Minced pork Parsley Poultry Vegetables Collection Food for animals Mineral water Collection Collection Collection CFU/ 225 ml nutritive broth 7,00E+05 4,00E+05 3,20E+05 8,00E+05 6,20E+05 5,70E+05 3,00E+05 4,20E+05 5,00E+05 7,00E+05 6,80E+05 5,20E+05 7,50E+05 3,80E+05 4,20E+05 3,00E+05 9,00E+04 8,10E+05 5,00E+05 4,50E+05 3,20E+05 5,70E+05 6,00E+05 1,90E+05 9,60E+04 2,20E+05 42/78 CFA Ø Ø Ø Ø -LE Ø Ø Ø Ø Ø Ø Ø Ø Ø Ø Ø -LE Ø Ø Ø Ø Ø Ø -HE -HE -HE Comment Dark red colony with irregular edges and darker center Dark red colony with irregular edges and darker center Opaque pinkish flat colony Brilliant red colony without metallic sheen Brilliant red colony without metallic sheen December 29, 2016 bioMérieux EXCLUSIVITY Reference Strain 57 43526 43504 62 C40 C41 E1 E6 Proteus vulgaris Helicobacter pylori Helicobacter pylori Vibrio parahaemolyticus Campylobacter fetus Campylobacter fetus Enterococcus faecalis Enterococcus faecalis Accuracy Escherichia coli Aeromonas hydrophila ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) Origin Collection Clinical sample Clinical sample Collection Collection Collection Egg ATCC 19433 CFU/ 225 ml nutritive broth 1,40E+05 9,00E+04 9,00E+04 9,60E+04 3,00E+01 2,10E+01 3,60E+05 1,70E+05 CFA Ø -HE -HE Ø +HA +HA Ø Ø Growth Growth 43/78 Comment Brilliant pinkish red colony Brilliant pinkish red colony Culture in CFB at 25°C, no growth at 41.5°C Culture in CFB at 25°C, no growth at 41.5°C Dark red colony with irregular edge and darker center Red purple colony without metallic sheen December 29, 2016 bioMérieux Appendix 6 - Results obtained by each collaborator laboratory and by the expert laboratory (Initial validation - IPL 2010) =: corresponding result Laboratory A #: discordant result Analyses realized at Day 1 Reference method EN ISO 10272-1 Presence of Final characteristic CFU Confirmation result** mCCDA Campylosel 27 28 35 36 41 42 43 44 29 30 31 32 39 40 45 46 25 26 33 34 37 38 47 48 Total flora 30°C of poultry meat (CFU/g) : 1,1.109 **Important interfering flora Code sample Laboratory B / : not realized (no characteristic colony) Comparison / Expected result Code sample = = = = = = = = # # # # # # # # # # # # # # # # 5 6 9 10 13 14 19 20 3 4 11 12 17 18 23 24 1 2 7 8 15 16 21 22 Comparison / Expected result Code sample = = = = = = = = # = = = = = = # = = = = = = = = 5 6 9 10 13 14 19 20 3 4 11 12 17 18 23 24 1 2 7 8 15 16 21 22 Alternative method CFB - CFA VIDAS CAM Presence of Final confirmation characteristic result CFU on CFA Test result + / / + + + / / / + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Analyses realized at Day 1 Reference method EN ISO 10272-1 Presence of Final characteristic CFU Confirmation result** mCCDA Campylosel 27 28 35 36 41 42 43 44 29 30 + + + 31 + + + 32 + + + 39 + + + 40 + + + 45 + + + 46 / 25 + + + 26 + + + 33 + + + 34 + + + 37 + + + 38 + + + 47 + + + 48 + + + Total flora 30°C of poultry meat (CFU/g) : 7,7.108 **Important interfering flora Code sample ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 44/78 Alternative method CFB - CFA VIDAS CAM Presence of Final confirmation characteristic result CFU on CFA Test result / / / / / / / / + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + December 29, 2016 bioMérieux Laboratory C Analyses realized at Day 2 Reference method EN ISO 10272-1 Presence of characteristic Final CFU Confirmation result** mCCDA Campylosel 27 28 35 36 41 42 43 44 29 30 31 32 39 40 45 46 25 26 33 34 37 38 47 48 Total flora 30°C of poultry meat (CFU/g) : >3.108 **Important interfering flora Code sample Laboratory D Comparison / Expected result Code sample = = = = = = = = # # # # # # # # # # # # # # # # 5 6 9 10 13 14 19 20 3 4 11 12 17 18 23 24 1 2 7 8 15 16 21 22 Comparison / Expected result Code sample = # = = = # = = = # # # = # # = = = = # # # = = 5 6 9 10 13 14 19 20 3 4 11 12 17 18 23 24 1 2 7 8 15 16 21 22 Alternative method CFB - CFA VIDAS CAM Presence of confirmation suspect CFU on Final result CFA Test result / / + + + + + + / / / / + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Analyses realized at Day 1 Reference method EN ISO 10272-1 Presence of Final characteristic CFU Confirmation result** mCCDA Campylosel 27 + 28 + + + + 35 + + 36 + + 41 + 42 + + + + 43 + 44 + 29 + + + + 30 + 31 + 32 + 39 + + + + 40 + 45 + + (1) 46 + + + + 25 + + + + 26 + + + + 33 + + + + 34 + 37 + 38 + + 47 + + + + 48 + + + + Total flora 30°C of poultry meat (CFU/g) : >3.108 **Important interfering flora Code sample ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 45/78 Alternative method CFB - CFA VIDAS CAM Presence of Final confirmation characteristic result CFU on CFA Test result / / / / / / / / + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + December 29, 2016 bioMérieux Laboratory E Analyses realized at Day 1 Reference method EN ISO 10272-1 Presence of characteristic Comparison / Final CFU Expected result Confirmation result** mCCDA Campylosel 27 + + + + # 28 + + + + # 35 + + + + # 36 + + + + # 41 + + + + # 42 + + + + # 43 = 44 = 29 + + # 30 + + # 31 + + + + = 32 + + + + = 39 + + + + = 40 + + + + = 45 + + + + = 46 + + + + = 25 + + + + = 26 + + + + = 33 + + # 34 + + # 37 + + # 38 + + # 47 + + + + = 48 + + + + = Total flora 30°C of poultry meat (CFU/g) : 8,1,107 CFU/g Code sample Laboratory G Code sample 5 6 9 10 13 14 19 20 3 4 11 12 17 18 23 24 1 2 7 8 15 16 21 22 Alternative method CFB - CFA VIDAS CAM Presence of Final confirmation characteristic result CFU on CFA Test result / / / / / / / / + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Analyses realized at Day 1 Reference method EN ISO 10272-1 Presence of characteristic Comparison / Final CFU Expected result Confirmation result** mCCDA Campylosel 27 + + + # 28 + + + # 35 + + + # 36 + + + + # 41 = 42 = 43 = 44 + = 29 # 30 # 31 # 32 + # 39 + # 40 # 45 # 46 + + + + = 25 + + + + = 26 + # 33 + # 34 + + + = 37 + + + + = 38 # 47 + + + + = 48 + + + = Total flora 30°C of poultry meat (CFU/g) : >3.0.108 CFU/g **Important interfering flora Code sample ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 46/78 Code sample 5 6 9 10 13 14 19 20 3 4 11 12 17 18 23 24 1 2 7 8 15 16 21 22 Alternative method CFB - CFA VIDAS CAM Presence of confirmation characteristic Final result CFU on CFA Test result / / + + + + + + / + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + December 29, 2016 bioMérieux Laboratory H Analyses realized at Day 1 Reference method EN ISO 10272-1 Presence of characteristic Comparison / Final CFU Expected result Confirmation result** mCCDA Campylosel 27 / = 28 / = 35 / = 36 / = 41 / = 42 / = 43 / = 44 / = 29 / # 30 / # 31 / # 32 / # 39 / # 40 + + + + = 45 / # 46 / # 25 + + + = 26 + + + + = 33 + + + + = 34 + + + + = 37 + + + + = 38 / # 47 + + + + = 48 + + + + = Total flora 30°C of poultry meat (CFU/g) : >3,108 CFU/g **Important interfering flora Code sample Laboratory J ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 5 6 9 10 13 14 19 20 3 4 11 12 17 18 23 24 1 2 7 8 15 16 21 22 Alternative method CFB - CFA VIDAS CAM Presence of confirmation characteristic Final result CFU on CFA Test result / / / / / / / / + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Reception at D2 (13 °C) Reference method EN ISO 10272-1 Presence of characteristic Final CFU Confirmation result** mCCDA Campylosel 27 28 35 36 41 42 43 44 29 30 31 32 39 40 45 46 25 26 33 34 37 38 47 48 Total flora 30°C of poultry meat (CFU/g) : 4,4.109 **Important interfering flora Code sample Code sample Comparison / Expected result Code sample = = = = = = = = # # # # # # # # # # # # # # # # 5 6 9 10 13 14 19 20 3 4 11 12 17 18 23 24 1 2 7 8 15 16 21 22 47/78 Alternative method CFB - CFA VIDAS CAM Presence of confirmation suspect CFU on Final result CFA Test result + + / + / + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + December 29, 2016 bioMérieux Laboratory K Analyses realized at Day 1 Reference method EN ISO 10272-1 Presence of characteristic Final CFU Confirmation result** mCCDA Campylosel 27 + 28 + 35 + 36 + 41 + 42 + 43 + 44 + 29 + 30 + 31 + 32 + 39 + 40 + 45 + 46 + 25 + 26 + 33 + 34 + 37 + 38 + 47 + 48 + Total flora 30°C of poultry meat (CFU/g) : 9,4.107 **Important interfering flora Code sample Laboratory L ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) Code sample = = = = = = = = # # # # # # # # # # # # # # # # 5 6 9 10 13 14 19 20 3 4 11 12 17 18 23 24 1 2 7 8 15 16 21 22 Comparison / Expected result Code sample # = # = = # # # = = = # # # = = = # = = = # = = 5 6 9 10 13 14 19 20 3 4 11 12 17 18 23 24 1 2 7 8 15 16 21 22 Alternative method CFB - CFA VIDAS CAM Presence of confirmation characteristic Final result CFU on CFA Test result + + / / / / / / + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Analyses realized at Day 1 Reference method EN ISO 10272-1 Presence of characteristic Final CFU Confirmation result** mCCDA Campylosel 27 + + + + 28 35 + + + + 36 41 42 + + + + 43 + + + + 44 + + + + 29 + + + + 30 + + + + 31 + + + + 32 39 40 45 + + + + 46 + + + + 25 + + + + 26 33 + + + + 34 + + + + 37 + + + + 38 47 + + + + 48 + + + + Total flora 30°C of poultry meat (CFU/g) : 2,8.108 Code sample Comparison / Expected result 48/78 Alternative method CFB - CFA VIDAS CAM Presence of confirmation characteristic Final result CFU on CFA Test result / / + + / / / / / / + / + + + + + + + + + + + + + + + / / + + + + + + + + + + + + + + + + + + December 29, 2016 bioMérieux Laboratory M Analyses realized at Day 1 Reference method EN ISO 10272-1 Presence of characteristic Final CFU Confirmation result** mCCDA Campylosel 27 + + + + 28 + 35 + 36 + + + + 41 + 42 + + + 43 44 + 29 + + + + 30 31 32 + + + + 39 + + + + 40 + + + + 45 46 25 + + + + 26 + + + + 33 + + + + 34 + 37 38 + + + + 47 + + + + 48 + + + + Total flora 30°C of poultry meat (CFU/g) : 3,6.107 Code sample Laboratory N Comparison / Expected result Code sample # = = # = # = = = # # = = = # # = = = # # = = = 5 6 9 10 13 14 19 20 3 4 11 12 17 18 23 24 1 2 7 8 15 16 21 22 Comparison / Expected result Code sample = = = = = = = = # # # # # # # # # # # # # # # # 5 6 9 10 13 14 19 20 3 4 11 12 17 18 23 24 1 2 7 8 15 16 21 22 Alternative method CFB - CFA VIDAS CAM Presence of confirmation characteristic Final result CFU on CFA Test result + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Analyses realized at Day 1 Reference method EN ISO 10272-1 Presence of characteristic Final CFU Confirmation result** mCCDA Campylosel 27 28 35 36 41 42 43 44 29 30 31 32 39 40 45 46 25 26 33 34 37 38 47 48 Total flora 30°C of poultry meat (CFU/g) : 2,9.107 **Important interfering flora Code sample ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 49/78 Alternative method CFB - CFA VIDAS CAM Presence of confirmation characteristic Final result CFU on CFA Test result / + + + / / / / / / + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + December 29, 2016 bioMérieux Laboratory O Analyses realized at Day 1 Reference method EN ISO 10272-1 Presence of characteristic Final CFU Confirmation result** mCCDA Campylosel 27 28 35 36 41 42 43 44 29 30 31 32 39 + + + 40 45 46 25 + + + 26 33 34 37 38 47 48 Total flora 30°C of poultry meat (CFU/g) : 2,9.107 Code sample Laboratory P ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) Code sample = = = = = = = = # # # # = # # # = # # # # # # # 5 6 9 10 13 14 19 20 3 4 11 12 17 18 23 24 1 2 7 8 15 16 21 22 Comparison / Expected result Code sample = = = = = = = = # # # # # # # # # # # # # # # # 5 6 9 10 13 14 19 20 3 4 11 12 17 18 23 24 1 2 7 8 15 16 21 22 Alternative method CFB - CFA VIDAS CAM Presence of confirmation characteristic Final result CFU on CFA Test result / + + + / / / / / / + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Analyses realized at Day 2 Reference method EN ISO 10272-1 Presence of characteristic Final CFU Confirmation result** mCCDA Campylosel 27 28 35 36 41 42 43 44 29 30 31 32 39 40 45 46 25 26 33 34 37 38 47 48 Total flora 30°C of poultry meat (CFU/g) : 5,5.107 **Important interfering flora which can mask Campylobacter spp Code sample Comparison / Expected result 50/78 Alternative method CFB - CFA VIDAS CAM Presence of confirmation characteristic Final result CFU on CFA Test result / / + + + / / / / / + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + December 29, 2016 bioMérieux Laboratory Q Analyses realized at Day 1 Reference method EN ISO 10272-1 Presence of characteristic Final CFU Confirmation result** mCCDA Campylosel 27 + 28 35 36 41 42 43 44 29 30 31 32 39 + + + + 40 45 46 25 + + + + 26 33 + + + + 34 37 38 + + + + 47 + + + + 48 + + + + Total flora 30°C of poultry meat (CFU/g) : 8,7.107 Code sample Comparison / Expected result Code sample = = = = = = = = # # # # = # # # = # = # # = = = 5 6 9 10 13 14 19 20 3 4 11 12 17 18 23 24 1 2 7 8 15 16 21 22 Comparison / Expected result Code sample = = = = = = = = # # # # # # # # # # # # # # # # 5 6 9 10 13 14 19 20 3 4 11 12 17 18 23 24 1 2 7 8 15 16 21 22 Alternative method CFB - CFA VIDAS CAM Presence of confirmation characteristic Final result CFU on CFA Test result / / / / / / / / + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Expert laboratory (IPL) Reference method EN ISO 10272-1 Presence of Final characteristic CFU Confirmation* result** mCCDA Campylosel 27 + + 28 35 + + 36 + + 41 + + 42 + + 43 + + 44 + + 29 + + 30 + + 31 + + 32 + + 39 + + 40 + + 45 + + 46 + + 25 + + 26 + + 33 + + 34 + + 37 + + 38 + + 47 + + 48 + + Total flora 30°C of poultry meat (CFU/g) : 6,7.107 Code sample Alternative method CFB - CFA VIDAS CAM Presence of confirmation characteristic Final result CFU on CFA Test result + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + * 5 colonies tested **High level of background microflora present on mCCDA plates ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 51/78 December 29, 2016 bioMérieux Appendix 7 - Accordance (Initial validation - IPL 2010) ALTERNATIVE METHOD Level L0 Laboratory A B D E G H K M N O Q Nb of negatives Nb of negatives expected obtained 8 6 8 8 8 8 8 8 8 6 8 8 8 8 8 7 8 7 8 7 8 8 Probability Probability of Probability of of negatives negatives pairs positives 0,75 0,56 0,25 1,00 1,00 0,00 1,00 1,00 0,00 1,00 1,00 0,00 0,75 0,56 0,25 1,00 1,00 0,00 1,00 1,00 0,00 0,88 0,77 0,13 0,88 0,77 0,13 0,88 0,77 0,13 1,00 1,00 0,00 Probability of Probability of positive pairs identical result pairs 0,06 0,63 0,00 1,00 0,00 1,00 0,00 1,00 0,06 0,63 0,00 1,00 0,00 1,00 0,02 0,78 0,02 0,78 0,02 0,78 0,00 1,00 Mean : 0,87 Accordance : 87% Nb of positives expected 8 8 8 8 8 8 8 8 8 8 8 Nb of positives obtained 8 8 8 8 8 8 8 7 8 7 8 Probability of positives 1,00 1,00 1,00 1,00 1,00 1,00 1,00 0,88 1,00 0,88 1,00 Probability of positives pairs 1,00 1,00 1,00 1,00 1,00 1,00 1,00 0,77 1,00 0,77 1,00 Probability of negatives 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,13 0,00 0,13 0,00 Probability of Probability of negative pairs identical result pairs 0,00 1,00 0,00 1,00 0,00 1,00 0,00 1,00 0,00 1,00 0,00 1,00 0,00 1,00 0,02 0,78 0,00 1,00 0,02 0,78 0,00 1,00 Mean : 0,96 Accordance : 96% Nb of positives expected 8 8 8 8 8 8 8 8 8 8 8 Nb of positives obtained 8 8 8 8 8 8 8 8 8 8 8 Probability of positives 1,00 1,00 1,00 1,00 1,00 1,00 1,00 1,00 1,00 1,00 1,00 Probability of positives pairs 1,00 1,00 1,00 1,00 1,00 1,00 1,00 1,00 1,00 1,00 1,00 Probability of negatives 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00 Probability of Probability of negative pairs identical result pairs 0,00 1,00 0,00 1,00 0,00 1,00 0,00 1,00 0,00 1,00 0,00 1,00 0,00 1,00 0,00 1,00 0,00 1,00 0,00 1,00 0,00 1,00 Mean : 1,00 Accordance : 100% Level L1 Laboratory A B D E G H K M N O Q Level L2 Laboratory A B D E G H K M N O Q ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 52/78 December 29, 2016 bioMérieux REFERENCE METHOD Level L0 Nb of negatives Nb of negatives expected obtained 8 8 8 8 8 6 8 2 8 4 8 8 8 8 8 5 8 8 8 8 8 8 Probability Probability of Probability of of negatives negatives pairs positives 1,00 1,00 0,00 1,00 1,00 0,00 0,75 0,56 0,25 0,25 0,06 0,75 0,50 0,25 0,50 1,00 1,00 0,00 1,00 1,00 0,00 0,63 0,39 0,38 1,00 1,00 0,00 1,00 1,00 0,00 1,00 1,00 0,00 Probability of Probability of positive pairs identical result pairs 0,00 1,00 0,00 1,00 0,06 0,63 0,56 0,63 0,25 0,50 0,00 1,00 0,00 1,00 0,14 0,53 0,00 1,00 0,00 1,00 0,00 1,00 Mean : 0,84 Accordance : 84% Nb of positives expected 8 8 8 8 8 8 8 8 8 8 8 Nb of positives obtained 0 6 3 6 1 1 0 4 0 1 1 Probability of positives 0,00 0,75 0,38 0,75 0,13 0,13 0,00 0,50 0,00 0,13 0,13 Probability of positives pairs 0,00 0,56 0,14 0,56 0,02 0,02 0,00 0,25 0,00 0,02 0,02 Probability of negatives 1,00 0,25 0,63 0,25 0,88 0,88 1,00 0,50 1,00 0,88 0,88 Probability of Probability of negative pairs identical result pairs 1,00 1,00 0,06 0,63 0,39 0,53 0,06 0,63 0,77 0,78 0,77 0,78 1,00 1,00 0,25 0,50 1,00 1,00 0,77 0,78 0,77 0,78 Mean : 0,76 Accordance : 76% Laboratory Nb of positives expected Nb of positives obtained Probability of positives Probability of positives pairs Probability of negatives Probability of negative pairs Probability of identical result pairs 0 8 5 4 5 7 0 6 0 1 5 0,00 1,00 0,63 0,50 0,63 0,88 0,00 0,75 0,00 0,13 0,63 0,00 1,00 0,39 0,25 0,39 0,77 0,00 0,56 0,00 0,02 0,39 1,00 0,00 0,38 0,50 0,38 0,13 1,00 0,25 1,00 0,88 0,38 1,00 0,00 0,14 0,25 0,14 0,02 1,00 0,06 1,00 0,77 0,14 Mean : Accordance : 1,00 1,00 0,53 0,50 0,53 0,78 1,00 0,63 1,00 0,78 0,53 0,75 75% Laboratory A B D E G H K M N O Q Level L1 Laboratory A B D E G H K M N O Q Level L2 A B D E G H K M N O Q 8 8 8 8 8 8 8 8 8 8 8 ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 53/78 December 29, 2016 bioMérieux Appendix 8 - Concordance (Initial validation - IPL 2010) ALTERNATIVE METHOD Number of laboratories Number of negatives per laboratory Level L0 Laboratory Nb of negatives expected A 8 B 8 D 8 E 8 G 8 H 8 K 8 M 8 N 8 O 8 Q 8 Total Concordance 85.17% Number of laboratories Number of negatives per laboratory Level L1 Laboratory Nb of positives expected A 8 B 8 D 8 E 8 G 8 H 8 K 8 M 8 N 8 O 8 Q 8 Total Concordance 95.51% Number of laboratories Number of negatives per laboratory Level L2 Laboratory Nb of positives expected A 8 B 8 D 8 E 8 G 8 H 8 K 8 M 8 N 8 O 8 Q 8 Total Concordance 100.00% ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 11 8 Nb of negatives obtained 6 8 8 8 6 8 8 7 7 7 8 Inter-laboratory pairs with the same result 460 584 584 584 460 584 584 524 524 524 584 5996 Total number of interlaboratory pairs 640 640 640 640 640 640 640 640 640 640 640 7040 Inter-laboratory pairs with the same result 624 624 624 624 624 624 624 554 624 554 624 6724 Total number of interlaboratory pairs 640 640 640 640 640 640 640 640 640 640 640 7040 Inter-laboratory pairs with the same result 640 640 640 640 640 640 640 640 640 640 640 7040 Total number of interlaboratory pairs 640 640 640 640 640 640 640 640 640 640 640 7040 11 8 Nb of positives obtained 8 8 8 8 8 8 8 7 8 7 8 11 8 Nb of positives obtained 8 8 8 8 8 8 8 8 8 8 8 54/78 December 29, 2016 bioMérieux REFERENCE METHOD Number of laboratories Number of negatives per laboratory Level L0 Laboratory Nb of negatives expected A 8 B 8 D 8 E 8 G 8 H 8 K 8 M 8 N 8 O 8 Q 8 Total Concordance 70.45% Number of laboratories Number of negatives per laboratory Level L1 Laboratory Nb of positives expected A 8 B 8 D 8 E 8 G 8 H 8 K 8 M 8 N 8 O 8 Q 8 Total Concordance 59.89% Number of laboratories Number of negatives per laboratory Level L2 Laboratory Nb of positives expected A 8 B 8 D 8 E 8 G 8 H 8 K 8 M 8 N 8 O 8 Q 8 Total Concordance 47.73% ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 11 8 Nb of negatives obtained 8 8 6 2 4 8 8 5 8 8 8 Inter-laboratory pairs with the same result 520 520 428 196 320 520 520 376 520 520 520 4960 Total number of interlaboratory pairs 640 640 640 640 640 640 640 640 640 640 640 7040 Inter-laboratory pairs with the same result 456 228 360 228 428 428 456 320 456 428 428 4216 Total number of interlaboratory pairs 640 640 640 640 640 640 640 640 640 640 640 7040 Inter-laboratory pairs with the same result 312 264 312 320 312 284 312 300 312 320 312 3360 Total number of interlaboratory pairs 640 640 640 640 640 640 640 640 640 640 640 7040 11 8 Nb of positives obtained 0 6 3 6 1 1 0 4 0 1 1 11 8 Nb of positives obtained 0 8 5 4 5 7 0 6 0 1 5 55/78 December 29, 2016 bioMérieux Appendix 9 - Inclusivity / Exclusivity: protocols (Extension study - ADRIA Développement 2014) Non target strains Microbeads Brucella or BHI, 48 h at 41,5°C or 37°C 4 Sub-culture in Brucella or BHI Incubation for 48 h at 41,5°C or 37°C VIDAS CAM Streaking onto Columbia blood Agar Streaking onto CampyFood Agar (CFA) Incubation 40 – 48 h at 41.5°C Incubation 40 – 48 h at 41.5°C Latex test Latex test Target strains Microbeads Brucella, 44 h ± 4 h at 41,5°C Sub-culture in CFB Incubation 48 h ± 4 h at 41.5°C in microaerobic conditions Streaking onto Columbia blood Agar Streaking onto CampyFood Agar Incubation 40 – 48 h at 41.5°C Incubation 40 – 48 h at 41.5°C Latex test Latex test ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 56/78 December 29, 2016 bioMérieux Appendix 10 - Inclusivity study: raw data (Extension study - ADRIA Développement 2014) INCLUSIVITY N° Strain Reference Origin Columbia blood Agar CAMPYLOBACTER spp latex kit Latex Latex control Result + + Growth 1 Campylobacter coli Ad1004 Turkey skin 2 Campylobacter coli Ad1005 Turkey skin + - + + + - + 3 Campylobacter coli Ad1007 Chicken skin + - + + + - + 4 Campylobacter coli Ad1008 Turkey skin + - + + + - + 5 Campylobacter coli Ad1009 Chicken skin + - + + + - + 6 Campylobacter coli Ad1010 Chicken skin + - + + + - + 7 Campylobacter coli Ad1011 Turkey skin + - + + + - + 8 Campylobacter coli Ad1012 Chicken skin + - + + + (1) - (1) + 9 Campylobacter coli Ad1018 Chicken leg + - + + + - + 10 Campylobacter coli Ad1024 Chicken skin + - + + + (1) - (1) + 11 Campylobacter coli Ad1025 Turkey skin + - + + + - + 12 Campylobacter coli Ad1072 Turkey skin + - + + + - + 13 Campylobacter coli Ad1073 Turkey skin + - + + + - + 14 Campylobacter coli Ad1074 Turkey skin + - + + + - + 15 Campylobacter coli Ad1075 Turkey skin + - + + + - + 16 Campylobacter coli Ad1077 Turkey skin + - + + + - + 17 Campylobacter coli Ad1087 Chicken skin + - + + + - + 18 Campylobacter coli Ad1121 Faeces + - + + + (1) - (1) + 19 Campylobacter coli Ad1122 Faeces + - + + + (1) - (1) + 20 Campylobacter coli Ad1123 Beef meat + - + + + - + 21 Campylobacter coli Ad1125 Chicken + - + + + (1) - + 22 Campylobacter coli Ad1477 Carcass + - + + + - + ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 57/78 + CampyFood agar 41.5°C CAMPYLOBACTER spp latex kit Latex Latex control Result + + December 29, 2016 bioMérieux INCLUSIVITY N° Strain Reference Origin Columbia blood Agar CAMPYLOBACTER spp latex kit Latex Latex control Result + + Growth 23 Campylobacter coli Ad1478 Carcass 24 Campylobacter coli Ad1479 Carcass + - + + + - + 25 Campylobacter coli Ad1480 Carcass + - + + + - + 26 Campylobacter coli Ad1481 Carcass + - + + + (1) - (1) + 27 Campylobacter coli Ad1485 Faeces + - + + + (1) - (1) + 28 Campylobacter coli Ad1889 Pork environmental sample + - + + + - + 29 Campylobacter coli CIP70.77 Faeces + - + + + - + 30 Campylobacter coli CIP70.80 Faeces + - + + + - + 31 Campylobacter coli Ad1893 Waste (slaughterhouse) + - + + + (1) - (1) + 32 Campylobacter coli Ad1894 Pork faeces + - + + + - + 33 Campylobacter coli Ad1895 Pork faeces + - + + + - + 34 Campylobacter coli Ad1897 Pork faeces + - + + + - + 35 Campylobacter coli Ad1899 Pork faeces + - + + + - + 36 Campylobacter coli Ad1900 Pork faeces + - + + + (1) - + 37 Campylobacter coli Ad1901 Chicken leg + - + + + (1) - (1) + 38 Campylobacter coli Ad1902 Chicken fillet without skin + - + + + - + 39 Campylobacter coli Ad1905 Duck leg + - + + + - + 40 Campylobacter coli Ad1907 Duck leg + - + + + - + 41 Campylobacter coli Ad1908 Duck fillet + - + + + (1) - (1) + 42 Campylobacter coli Ad1909 Chicken leg + - + + + - + 43 Campylobacter coli Ad1924 Chicken + - + + + - + 44 Campylobacter coli Ad1925 Chicken + - + + + - + 45 Campylobacter coli Ad1926 Chicken + - + + + - + 46 Campylobacter coli Ad1927 Chicken + - + + + - + ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 58/78 + CampyFood agar 41.5°C CAMPYLOBACTER spp latex kit Latex Latex control Result + + December 29, 2016 bioMérieux INCLUSIVITY N° Strain Reference Origin Columbia blood Agar CAMPYLOBACTER spp latex kit Latex Latex control Result + + Growth 47 Campylobacter coli Ad1928 Chicken 48 Campylobacter coli Ad1929 Chicken -/+ -/- -/+ + + (3) - + 49 Campylobacter coli Ad1930 Chicken + - + + + - + 50 Campylobacter coli Ad1938 Chicken + - + + + - + 51 Campylobacter coli Ad1939 Chicken + - + + + - + 52 Campylobacter coli Ad1940 Chicken + - + + + - + 53 Campylobacter coli Ad1941 Chicken + - + + + - + 54 Campylobacter coli Ad1942 Chicken + - + + + - + 55 Campylobacter coli Ad1943 Chicken + - + + + - + 56 Campylobacter coli Ad1944 Chicken + - + + + - + 57 Campylobacter coli Ad1952 Turkey + - + + + - + 58 Campylobacter coli Ad1953 Turkey + (2) - + + + (2) - + 59 Campylobacter coli Ad1954 Turkey + - + + + - + 60 Campylobacter coli Ad1955 Turkey + - + + + - + 61 Campylobacter coli Ad1956 Turkey + - + + + - + 62 Campylobacter coli Ad1957 Turkey + - + + + - + 63 Campylobacter coli Ad1958 Turkey + - + + + - + 64 Campylobacter coli Ad1959 Pork + - + + + - + 65 Campylobacter coli Ad1960 Pork + - + + + - + 66 Campylobacter coli Ad1961 Pork + - + + + - + 67 Campylobacter coli Ad1962 Pork + - + + + - + 68 Campylobacter coli Ad1963 Pork + - + + + (1) - + 69 Campylobacter coli Ad1964 Pork + - + + + (1) - + 70 Campylobacter coli Ad1965 Pork + - + + + - + ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 59/78 + CampyFood agar 41.5°C CAMPYLOBACTER spp latex kit Latex Latex control Result + + December 29, 2016 bioMérieux INCLUSIVITY N° Strain Reference Origin Columbia blood Agar CAMPYLOBACTER spp latex kit Latex Latex control Result + + Growth 71 Campylobacter coli Ad1966 Pork 72 Campylobacter coli Ad1967 Pork + - + + + (1) - + 73 Campylobacter coli Ad1968 Pork + - + + + - + 74 Campylobacter coli Ad1969 Pork + - + + + - + 75 Campylobacter coli Ad1970 Pork + - + + + (1) - + 76 Campylobacter coli Ad1971 Pork + - + + + - + 77 Campylobacter coli Ad1972 Pork + - + + + - + 78 Campylobacter coli Ad1980 River water + - + + + - + 79 Campylobacter coli Ad1981 River water + - + + + - + 80 Campylobacter coli Ad1982 River water + - + + + - + 81 Campylobacter coli Ad1983 River water + - + + + - + 82 Campylobacter coli Ad1984 River water + - + + + - + 83 Campylobacter coli Ad1985 River water + - + + + - + 84 Campylobacter coli Ad1986 River water + - + + + - + 85 Campylobacter coli Ad1997 Environmental sample (pork) - / + (2) -/- -/+ + - / + (2) - -/+ 86 Campylobacter jejuni Ad1000 Turkey skin + - + + + (1) - (1) + 87 Campylobacter jejuni Ad1002 Turkey skin + - + + + - + 88 Campylobacter jejuni Ad1003 Turkey skin + - + + + (1) - + 89 Campylobacter jejuni Ad1013 Chicken skin + - + + + - + 90 Campylobacter jejuni Ad1014 Chicken skin + - + + + - + 91 Campylobacter jejuni Ad1015 Chicken skin + - + + + - + 92 Campylobacter jejuni Ad1016 Chicken skin + - + + + - + 93 Campylobacter jejuni Ad1021 Chicken skin + - + + + - + 94 Campylobacter jejuni Ad1023 Turkey skin + - + + + - + ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 60/78 + CampyFood agar 41.5°C CAMPYLOBACTER spp latex kit Latex Latex control Result + + December 29, 2016 bioMérieux INCLUSIVITY N° Strain Reference Origin Columbia blood Agar CAMPYLOBACTER spp latex kit Latex Latex control Result + + Growth 95 Campylobacter jejuni Ad1076 Turkey skin 96 Campylobacter jejuni Ad1078 Turkey skin + - + + + - + 97 Campylobacter jejuni Ad1079 Turkey skin + - + + + - + 98 Campylobacter jejuni Ad1080 Turkey skin + - + + + - + 99 Campylobacter jejuni Ad1081 Turkey skin + - + + + - + 100 Campylobacter jejuni Ad1082 Turkey skin + - + + + - + 101 Campylobacter jejuni Ad1083 Turkey skin + - + + + - + 102 Campylobacter jejuni Ad1084 Chicken skin + - + + + - + 103 Campylobacter jejuni Ad1085 Chicken skin + - + + + - + 104 Campylobacter jejuni Ad1086 Chicken skin + - + + + - + 105 Campylobacter jejuni Ad1088 Chicken skin + - + + + - + 106 Campylobacter jejuni Ad1089 Chicken skin + - + + + - + 107 Campylobacter jejuni CIP70.54 Faeces + - + + + - + 108 Campylobacter jejuni Ad1892 Guinea fowl carcass + - + + + - + 109 Campylobacter jejuni Ad1910 Chicken fillet without skin + - + + + - + 110 Campylobacter jejuni Ad1917 Chicken + - + + + (1) - (1) + 111 Campylobacter jejuni Ad1918 Chicken + - + + + - + 112 Campylobacter jejuni Ad1919 Chicken + - + + + - + 113 Campylobacter jejuni Ad1920 Chicken + - + + + - + 114 Campylobacter jejuni Ad1921 Chicken + - + + + (2) - + 115 Campylobacter jejuni Ad1922 Chicken + - + + + (1) - (1) + 116 Campylobacter jejuni Ad1923 Chicken + - + + + - + 117 Campylobacter jejuni Ad1932 Chicken + - + + + - + 118 Campylobacter jejuni Ad1933 Chicken + - + + + - + ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 61/78 + CampyFood agar 41.5°C CAMPYLOBACTER spp latex kit Latex Latex control Result + + December 29, 2016 bioMérieux INCLUSIVITY N° Strain Reference Origin Columbia blood Agar CAMPYLOBACTER spp latex kit Latex Latex control Result + + Growth 119 Campylobacter jejuni Ad1934 Chicken 120 Campylobacter jejuni Ad1935 Chicken + - + + + - + 121 Campylobacter jejuni Ad1936 Chicken + - + + + - + 122 Campylobacter jejuni Ad1946 Turkey + (2) - + + + - + 123 Campylobacter jejuni Ad1947 Turkey + - + + + - + 124 Campylobacter jejuni Ad1948 Turkey + (2) - + + + - + 125 Campylobacter jejuni Ad1949 Turkey + - + + + - + 126 Campylobacter jejuni Ad1950 Turkey + - + + + - + 127 Campylobacter jejuni Ad1974 River water + - + + + (1) - (1) + 128 Campylobacter jejuni Ad1975 River water + - + + + - + 129 Campylobacter jejuni Ad1976 River water + - + + + - + 130 Campylobacter jejuni Ad1977 River water + - + + + - + 131 Campylobacter jejuni Ad1978 River water + - + + + - + 132 Campylobacter jejuni Ad1979 River water + - + + + - + 133 Campylobacter jejuni Ad1988 Wild birds + - + + + - + 134 Campylobacter jejuni Ad1989 Wild birds + - + + + - + 135 Campylobacter jejuni Ad1990 Wild birds + - + + + - + 136 Campylobacter jejuni Ad1991 Wild birds + - + + + - + 137 Campylobacter jejuni Ad1992 Wild birds + - + + + - + 138 Campylobacter jejuni subsp jejuni ATCC33291 + - + + + - + 139 Campylobacter jejuni subsp jejuni CIP70.2 + - + + + - + 140 Campylobacter lari Ad1067 - / + (2) - -/+ + - / + (2) - -/+ 141 Campylobacter lari Ad1130 - / + (3) - -/+d + - / + (2) - -/+ 142 Campylobacter lari ATCC35222 - / + (3) - -/+d + - / + (3) - -/+d ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) Turkey skin 62/78 + CampyFood agar 41.5°C CAMPYLOBACTER spp latex kit Latex Latex control Result + + December 29, 2016 bioMérieux INCLUSIVITY N° Strain Reference Origin 143 Campylobacter lari CIP102722 T 144 Campylobacter upsaliensis Ad1139 Faeces 145 Campylobacter upsaliensis ATCC43954 Coproculture 146 Campylobacter upsaliensis ATCC49815 147 Campylobacter upsaliensis ATCC49816 148 Campylobacter upsaliensis CIP103681 149 Campylobacter subantarcticus Ad1891 150 Campylobacter 151 152 Columbia blood Agar CAMPYLOBACTER spp latex kit Latex Latex control Result - / + (3) -/+d Growth + CampyFood agar 41.5°C CAMPYLOBACTER spp latex kit Latex Latex control Result - / + (2) -/+ + - + St / / / -/+ - -/+ St / / / + - + St / / / + - + St / / - -/+ - -/+ St / / / / - / + (2) - -/+ + - / + (3) - -/+d lari subsp. concheus Ad1911 / - / + (2) - -/+ + - / + (2) - -/+ Campylobacter hyointestinalis Ad1898 Pork faeces - / + (2) - -/+ + - / + (2) - -/+ Campylobacter hyointestinalis Ad1896 Pork faeces - / + (2) - -/+ + - / + d (2) - -/+d Human faeces All the latex tests were realized on a colony, except in cases mentioned in the result *: -/+: 1: 2: 3: d: st: Characteristic colonies: red-Bordeaux or red-orange with sometimes a metallic reflection First result obtained when testing one colony / Second result obtained when testing several colonies Heavy dumping of particles Fine granularity Very fine granularity (difficult to see) Doubtful result Sterile plate ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 63/78 December 29, 2016 bioMérieux Appendix 11 - Exclusivity study: raw data (Extension study - ADRIA Développement 2014) EXCLUSIVITY Strain N° Reference Origin VIDAS test (non selective broth) Columbia blood Agar CAMPYLOBACTER spp latex kit 1 Acinetobacter baumanii Ad1090 Haemoglobin - 161 0,03 + Latex control + 2 Acinetobacter calco var anitrat 1 Poultry - 156 0,03 - 3 Acinetobacter calcoaceticus Ad1092 Poultry white meat - 211 0,05 4 Acinetobacter johnsonii Ad1317 Egg product - 155 5 Acinetobacter sp. Ad 1551 Water - 6 Acinetobacter spp Adria5 / 7 Aeromonas allosaccharophile Ad1318 8 Aeromonas allosaccharophile 9 Aeromonas 10 CampyFood agar 41,5°C CAMPYLOBACTER spp latex kit Growth * - + - (3) Latex control - - - St / / / - - - +d - (3) - - 0,03 - - - St / / / 150 0,03 - - - St / / / - 200 0,04 + + - St / / / Egg product - 155 0,03 - - - St / / / Ad1518 Egg product - 158 0,03 - - - St / / / hydrophila CIP5750 / - 155 0,03 + (3) + (3) - St / / / Aeromonas hydrophila CIP74.30 / - 169 0,04 +d - +d St / / / 11 Aeromonas punctata Ad1329 Egg product - 163 0,04 - - - St / / / 12 Aeromonas punctata Ad1517 Egg product - 159 0,03 - - - St / / / 13 Aeromonas salmonicida Ad1319 Egg product - 164 0,04 - - - St / / / 14 15 16 17 18 Aeromonas Aeromonas Agrobacterium Alcaligenes Arcobacter salmonicida sobria tumefasciens faecalis butzleri Ad1716 CIP74.33 Ad1550 ATCC8750 CIP103493 Egg product / Water / / - 218 170 210 156 221 0,05 0,04 0,04 0,03 0,05 +d - +d - - St St St St + / / / / - / / / / - / / / / - 19 Arcobacter butzleri Ad1126 - 219 0,05 - - - + - - - 20 Arcobacter butzleri Ad1881 - 166 0,04 - - - St / / / 21 Arcobacter cryaerophilus CIP104014 Chicken Environmental sample / - 155 0,03 + + - St / / / ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) Result RFV VT Latex 64/78 Result Latex Result - December 29, 2016 bioMérieux EXCLUSIVITY Strain N° Reference Origin VIDAS test (non selective broth) Columbia blood Agar CAMPYLOBACTER spp latex kit 22 Arcobacter cryarerophilus Ad1124 Chicken - 155 0,03 - Latex control - 23 Arcobacter skirrowii DSM7302 - 220 0,05 - 24 Burholderia sp. Ad 2003 - 156 0,03 25 Burkholderia spp Ad1587 / Environmental sample (poultry) Mud - 213 26 Burkholderia vietnamiensis Ad1538 Soil - 27 Campylobacter fetus Ad1069 Chicken 28 Campylobacter fetus Ad1068 29 Carnobacterium mobile 30 Chryseobacterium 31 CampyFood agar 41,5°C CAMPYLOBACTER spp latex kit Growth * - St / Latex control / - - St / / / - (3) - (3) - + - (3) - (3) - 0,05 - - - St / / / 153 0,03 - - - St / / / + 4469 1,10 -/- - - St / / / Chicken + 3393 0,83 -/- - - St / / / ATCC49516 Ionised chicken - 169 0,04 - - - St / / / sp Ad1322 Egg product - 208 0,04 - - - St / / / Chryseobacterium ureilyticum Ad1340 Egg product - 210 0,04 +d - +d St / / / 32 Citrobacter freundii 54 Poultry meat - 156 0,03 - - - St / / / 33 Citrobacter freundii Ad173 Chicken liver - 105 0,02 - - - St / / / 34 Comamonas aquatica Ad1543 Water - 151 0,03 - - - St / / / 35 Comamonas sp. Ad1537 Sol - 214 0,05 - - - St / / / 36 Enterobacter amnigenus A00C068 Cockerel - 82 0,02 - - - St / / / 37 Enterobacter intermedius 88a - 86 0,02 - (3) - (3) - St / / / 38 Enterobacter fergusoni 2876 - 97 0,02 - - - St / / / 39 Enterobacter spp D7 Gizzard Environmental sample Poultry - 80 0,01 + (1) + (1) - St / / / 40 Enterococcus durans Ad148 Ham - 144 0,03 - - - St / / / 41 Enterococcus faecalis 25 Chicken leg - 130 0,03 - (3) - (3) - St / / / 42 Enterococcus faecium Ad1883 Turkey skin - 145 0,03 - - - St / / / 43 Enterococcus gallinarum Ad1885 Poultry - 120 0,02 - - - St / / / ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) Result RFV VT Latex 65/78 Result Latex Result / December 29, 2016 bioMérieux EXCLUSIVITY Strain N° Reference Origin VIDAS test (non selective broth) Columbia blood Agar CAMPYLOBACTER spp latex kit 44 Enterococcus gallinarum Ad1145 Guacamole - 124 0,03 - Latex control - 45 Escherichia coli Ad 241 Chicken - 77 0,01 - 46 Escherichia coli Ad1915 White chicken leg - 161 0,03 47 Escherichia coli Ad1999 Chicken fillet - 156 48 Escherichia coli Ad 2000 Chicken fillet - 49 Escherichia coli Ad 2001 Chicken leg 50 Escherichia fergusonii Ad1381 51 Escherichia vulneris 52 Flavobacterium 53 CampyFood agar 41,5°C CAMPYLOBACTER spp latex kit Growth * - St / Latex control / + (1) - St / / / - - - - - - - 0,03 - - - - - - - 156 0,03 + + (1) - - + + - - 156 0,03 + + - - + (2) d + - Water - 154 0,03 - - - St / / / 127 Raw milk - 152 0,03 - - - St / / / hydratis Ad1323 Egg product - 155 0,03 - (3) - (3) - St / / / Flavobacterium indologenes 26 Whole egg product - 154 0,03 - - - St / / / 54 Gluconobacter cerinus Ad374 Food based product - 147 0,03 - - - St / / / 55 Gluconobacter oxydans Ad997 Sweetened drink - 89 0,02 - - - St / / / 56 57 Hafnia Hafnia 168 A00C067 Duck meat Cockerel - 210 152 0,04 0,03 - (3) - (3) - St St / / / / / / 58 Klebsiella 47 Raw turkey skin - 158 0,03 + (2) + (2) - St / / / 59 Lactobacillus alvei alvei pneumoniae subsp pneumoniae brevis Ad405 Ham - 153 0,03 - - - St / / / 60 Lactobacillus curvatus Ad379 Cured meat - 149 0,03 - - - St / / / 61 Lactobacillus paraplantarum Ad372 Saussage - 154 0,03 - - - St / / / 62 Lactobacillus sakei Ad404 Ham - 144 0,03 - - - St / / / 63 Lactobacillus vermoldensis Ad373 Saussage - 151 0,03 - - - St / / / 64 Lactobacillus sp. Ad1906 Duck meat - 156 0,03 - - - St / / / 65 Moraxella 49.7 Chicken - 159 0,03 + + - St / / / ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) Result RFV VT Latex 66/78 Result Latex Result / December 29, 2016 bioMérieux EXCLUSIVITY Strain N° Reference Origin VIDAS test (non selective broth) Columbia blood Agar CAMPYLOBACTER spp latex kit 51.11 Chicken - 153 0,03 - Latex control - odoratiminus Ad1341 Egg product - 156 0,03 - Ochrobactrum pseudintermedius Ad1057 Turkey skin - 221 0,05 69 Ochrobactrum pseudintermedius Ad1058 Turkey skin - 218 70 Ochrobactrum sp. Ad1916 Chicken fillet - 71 Ochrobactrum sp. Ad2006 Pork faeces 72 Pandoraea sp. Ad1882 73 Petrobacter succinimandens 74 Photobacterium 75 CampyFood agar 41,5°C CAMPYLOBACTER spp latex kit Growth * - St / Latex control / - - St / / / - - - + - - - 0,05 - - - + - - - 172 0,04 - - - - - (3) - - - 162 0,03 - - - - - - - / - 161 0,03 - - - +d - (3) - - Ad423 / - 152 0,03 - - - St / / / phosphoreum Ad1506 Salmon - 144 0,03 - - - St / / / Plesiomonas shigelloïdes Ad673 Fish - 154 0,03 - - - St / / / 76 Providencia stuartii 46 Turkey leg - 129 0,03 - (3) - (3) - St / / / 77 Pseudomonas aeruginosa Ad1528 River water - 152 0,03 - (3) - (3) - St / / / 78 Pseudomonas fluorescens J2 Ham - 154 0,03 - (3) - (3) - St / / / 79 Pseudomonas fragi Ad1327 Egg product - 155 0,03 - - (3) - St / / / 80 Pseudomonas otitidis Ad1880 - 152 0,03 - (3) - (3) - St / / / 81 Pseudomonas pseudo alcaligenes Ad1592 - 155 0,03 - - - St / / / 82 Pseudomonas putida J7 Turkey skin Environmental sample (water) Ham - 156 0,03 - - - - - (3) - (3) - 83 Pseudomonas putida 4 - 154 0,03 - - - St / / / 84 Pseudomonas sp. Ad 2004 - 154 0,03 - - - + - (3) - (3) - 85 Pseudomonas stutzeri Ad1593 - 154 0,03 - - - St / / / 86 Pseudomonas veronii Ad1588 Poultry Environmental sample (poultry) Environmental sample (water) Environmental sample - 155 0,03 - - - - - - - 66 Moraxella 67 Myroïdes 68 ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) Result RFV VT Latex 67/78 Result Latex Result / December 29, 2016 bioMérieux EXCLUSIVITY Strain N° Reference Origin VIDAS test (non selective broth) Columbia blood Agar CAMPYLOBACTER spp latex kit 87 Psychrobacter psychrophilus Ad1343 Egg product - 151 0,03 - Latex control - 88 Ralstonia mannitolilytica Ad1059 Turkey skin - 157 0,03 - 89 Ralstonia mannitolilytica DSM17512 / - 154 0,03 90 Serratia liquefaciens 87a Gizzard - 151 91 Shewanella putrefasciens EN15/34 Trout - 92 Shigella flexneri Ad2002 Chicken leg 93 Shigella sonnei CIP82.49T 94 Shigella sp Ad1367 95 Sphingobacterium sp 96 Staphylococcus 97 CampyFood agar 41,5°C CAMPYLOBACTER spp latex kit Growth * - St / Latex control / - - +d - - - - - - + - - - 0,03 - (3) - - St / / / 218 0,05 - - - St / / / - 155 0,03 + (1) + (2) - - + (2) + (2) - - 151 0,03 - - - St / / / - 152 0,03 - - - St / / / Ad1324 / Swimming-pool water Egg product - 152 0,03 - - - St / / / aureus Ad906 Merguez - 183 0,04 - - - St / / / Vibrio alginolyticus Ad1888 Oysters - 142 0,03 - - - St / / / 98 Vibrio cholereae Ad1887 Panga fillet - 144 0,03 + + - St / / / 99 Vibrio parahaemolyticus CIP75.2 / - 156 0,03 - - - St / / / 100 Yersinia enterocolitica A00C066 Cockerel - 146 0,03 - - - St / / / 101 Shewanella baltica Ad1700 Salmon - 214 0,05 - - - St / / / *: -/+: 1: 2: 3: d: st: Result RFV VT Latex Result Latex Result / Characteristic colonies: red-Bordeaux or red-orange with sometimes a metallic reflection First result obtained when testing one colony / Second result obtained when testing several colonies Heavy dumping of particles Fine granularity Very fine granularity (difficult to see) Doubtful result Sterile plate ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 68/78 December 29, 2016 bioMérieux Appendix 12 - Protocol applied for the extension study (Extension study - ADRIA Développement, 2016) Non target strains Microbeads Brucella or BHI broth, 48 h at 41.5°C or 37°C Subculture in Brucella or BHI broth Incubation for 48 h at 41.5°C or 37°C Streaking onto Columbia blood agar (COS) Streaking onto CampyFood Agar (CFA) Incubation for 40 – 48 h at 41.5°C Incubation for 40 – 48 h at 41.5°C Test VITEK® MS on colony Test VITEK® MS on colony Target strains Microbeads Brucella, 44 h ± 4 h at 41.5°C Subculture in CampyFood Broth (CFB) Incubation for 48 h ± 4 h at 41.5°C Streaking onto CampyFood Agar (CFA) Streaking onto Incubation for 40 – 48 h at 41.5°C in micro aerobic Columbia blood agar (COS) conditions Test VITEK® MS ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 69/78 December 29, 2016 bioMérieux Appendix 13 - Inclusivity and exclusivity: raw data (Extension study - ADRIA Développement, 2016) VITEK MS Result: +: Campylobacter coli, jejuni or lari (See an example of the result provided by the software page 74) No result: no identification provided by the VITEK MS CampyFood Broth (CFB): 48 h ± 4 h at 41.5°C CampyFood Agar (CFA): 40 - 48h at 41.5°C INCLUSIVITY n° Strain Reference 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli Ad1004 Ad1005 Ad1007 Ad1008 Ad1009 Ad1010 Ad1011 Ad1012 Ad1018 Ad1024 Ad1025 Ad1072 Ad1073 Ad1074 Ad1075 Ad1077 Ad1087 Ad1121 Ad1122 Ad1123 Ad1125 Ad1477 Ad1478 Ad1479 Ad1480 Ad1481 Ad1485 28 Campylobacter coli Ad1889 29 30 31 32 33 34 Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter coli coli coli coli coli coli CIP70.77 CIP70.80 Ad1893 Ad1894 Ad1895 Ad1897 ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) Colony Confirmation result VITEK MS test V3.1 + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Columbia Blood Agar (COS) Confirmation result VITEK MS test V3.1 + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Origin Turkey skin Turkey skin Chicken skin Turkey skin Chicken skin Chicken skin Turkey skin Chicken skin Chicken leg Chicken skin Turkey neck skin Turkey neck skin Turkey neck skin Turkey neck skin Turkey neck skin Turkey neck skin Chicken neck skin Faecum Faecum Beef tream Chicken Carcass Carcass Carcass Carcass Carcass Faecum Pork environmental sample Faecum Faecum Waste Pork faecum Pork faecum Pork faecum 70/78 December 29, 2016 bioMérieux CampyFood Broth (CFB): 48 h ± 4 h at 41.5°C CampyFood Agar (CFA): 40 - 48h at 41.5°C INCLUSIVITY n° 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 Strain Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Reference coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli coli ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) Ad1899 Ad1900 Ad1901 Ad1902 Ad1905 Ad1907 Ad1908 Ad1909 Ad1924 Ad1925 Ad1926 Ad1927 Ad1928 Ad1929 Ad1930 Ad1938 Ad1939 Ad1940 Ad1941 Ad1942 Ad1943 Ad1944 Ad1952 Ad1953 Ad1954 Ad1955 Ad1956 Ad1957 Ad1958 Ad1959 Ad1960 Ad1961 Ad1962 Ad1963 Ad1964 Ad1965 Ad1966 Ad1967 Ad1968 Ad1969 Ad1970 Ad1971 Ad1972 Ad1980 Colony Confirmation result VITEK MS test V3.1 + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + No result + + + + + + + + + + + + + + + + + + + + + + + + + + + Origin Pork faecum Pork faecum Chicken meat Chicken meat Leg duck Leg duck Duck meat Chicken meat Chicken Chicken Chicken Chicken Chicken Chicken Chicken Chicken Chicken Chicken Chicken Chicken Chicken Chicken Turkey Turkey Turkey Turkey Turkey Turkey Turkey Pork Pork Pork Pork Pork Pork Pork Pork Pork Pork Pork Pork Pork Pork River water 71/78 Columbia Blood Agar (COS) Confirmation result VITEK MS test V3.1 + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + December 29, 2016 bioMérieux CampyFood Broth (CFB): 48 h ± 4 h at 41.5°C CampyFood Agar (CFA): 40 - 48h at 41.5°C INCLUSIVITY n° 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 Strain Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Reference coli coli coli coli coli jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) Ad1981 Ad1982 Ad1983 Ad1984 Ad1985 Ad1000 Ad1002 Ad1003 Ad1013 Ad1014 Ad1015 Ad1016 Ad1021 Ad1023 Ad1076 Ad1078 Ad1079 Ad1080 Ad1081 Ad1082 Ad1083 Ad1084 Ad1085 Ad1086 Ad1088 Ad1089 CIP70.54 Ad1892 Ad1910 Ad1917 Ad1918 Ad1919 Ad1920 Ad1921 Ad1922 Ad1923 Ad1932 Ad1933 Ad1934 Ad1935 Ad1936 Ad1946 Ad1947 Ad1948 Colony Confirmation result VITEK MS test V3.1 + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Origin River water River water River water River water River water Turkey neck skin Turkey neck skin Turkey neck skin Chicken skin Chicken neck skin Chicken skin Chicken skin Chicken neck skin Turkey neck skin Turkey neck skin Turkey neck skin Turkey neck skin Turkey neck skin Turkey neck skin Turkey neck skin Turkey neck skin Chicken neck skin Chicken neck skin Chicken neck skin Chicken neck skin Chicken neck skin Faecum Carcass Chicken meat Chicken Chicken Chicken Chicken Chicken Chicken Chicken Chicken Chicken Chicken Chicken Chicken Turkey Turkey Turkey 72/78 Columbia Blood Agar (COS) Confirmation result VITEK MS test V3.1 + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + December 29, 2016 bioMérieux CampyFood Broth (CFB): 48 h ± 4 h at 41.5°C CampyFood Agar (CFA): 40 - 48h at 41.5°C INCLUSIVITY n° Strain 123 124 125 126 127 128 129 130 131 132 133 134 135 Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter 136 Campylobacter 137 Campylobacter 138 139 140 141 142 143 144 145 146 147 Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter Campylobacter 148 Campylobacter 149 150 Campylobacter Campylobacter Ad1949 Ad1950 Ad1974 Ad1975 Ad1976 Ad1977 Ad1978 Ad1979 Ad1988 Ad1989 Ad1990 Ad1991 Ad1992 Turkey Turkey River water River water River water River water River water River water Wind bird Wind bird Wind bird Wind bird Wind bird + + + + + + + + + + + + + + + + + + + + + + + + + + Columbia Blood Agar (COS) Confirmation result VITEK MS test V3.1 + + + + + + + + + + + + + ATCC33291 / + + + CIP70.2 / + + + Ad1067 Ad1130 ATCC35222 CIP102722 T Ad1139 ATCC43954 ATCC49815 ATCC49816 CIP103681 Ad1891 Turckey neck skin / + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Ad1911 / + + + Ad1898 Ad1896 Pork faecum Pork faecum + + + + + + Reference jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni jejuni subsp jejuni jejuni subsp jejuni lari lari lari lari upsaliensis upsaliensis upsaliensis upsaliensis upsaliensis subantarcticus lari subsp. concheus hyointestinalis hyointestinalis ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) Colony Confirmation result VITEK MS test V3.1 Origin Faecum Environmental sample Human faecum 73/78 December 29, 2016 bioMérieux Figure 1 - Example of the results provided by the software ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 74/78 December 29, 2016 bioMérieux VITEK MS Result: st: no colony on the plate -: VITEK MS result different from Campylobacter coli, jejuni or lari (See an example of the result provided by the software page 78) No result: no identification provided by the VITEK MS EXCLUSIVITY n° 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 Strain Acinetobacter Acinetobacter Acinetobacter Acinetobacter Acinetobacter Acinetobacter Aeromonas Aeromonas Aeromonas Aeromonas Aeromonas Aeromonas Aeromonas Aeromonas Aeromonas Agrobacterium Alcaligenes Arcobacter Arcobacter baumanii calco var anitrat calcoaceticus johnsonii sp. spp allosaccharophile allosaccharophile hydrophila hydrophila punctata punctata salmonicida salmonicida sobria tumefasciens faecalis butzleri butzleri 20 Arcobacter butzleri 21 Arcobacter 22 Arcobacter 23 Arcobacter cryaerophilus cryarerophilus skirrowii 24 Burkholderia sp. 25 26 27 28 spp vietnamiensis fetus fetus Burkholderia Burkholderia Campylobacter Campylobacter 29 Carnobacterium Chryseobacteriu m Chryseobacteriu 31 m 32 Citrobacter 30 mobile Reference Origin Ad1090 1 Ad1092 Ad1317 Ad 1551 Adria5 Ad1318 Ad1518 CIP5750 CIP74.30 Ad1329 Ad1517 Ad1319 Ad1716 CIP74.33 Ad1550 ATCC8750 CIP103493 Ad1126 Hemoglobin Poultry Poultry meat Whole egg Water / Whole egg Whole egg / / Whole egg Whole egg Whole egg Whole egg / Water / / Chicken Environmental Ad1881 sample CIP104014 / Ad1124 Chicken DSM7302 / Environmental Ad 2003 sample Ad1587 Mud Ad1538 Ground Ad1069 Chicken Ad1068 Chicken ATCC4951 Chicken 6 Brucella: 48h CampyFood Agar (CFA): 40-48h at 41.5°C VITEK MS VITEK MS test V3.1 test V3.1 Colony Confirmation Confirmation result result + st / + st / st / No result st / st / st / st / st / st / st / st / st / st / st / st / st / st / + - - st st st / / / - + - No result st + + + / - No result - st / No result sp Ad1322 Whole egg st / - ureilyticum Ad1340 Whole egg st / - freundii 54 Poultry meat st / - ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 75/78 December 29, 2016 bioMérieux EXCLUSIVITY n° 33 34 35 36 37 Strain Citrobacter Comamonas Comamonas Enterobacter Enterobacter Reference Origin freundii aquatica sp. amnigenus intermedius Ad173 Ad1543 Ad1537 A00C068 88a 38 Enterobacter fergusoni 2876 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 spp durans faecalis faecium gallinarum gallinarum coli coli coli coli coli fergusonii vulneris hydratis indologenes cerinus oxydans alvei alvei pneumoniae subsp pneumoniae brevis curvatus paraplantarum sakei vermoldensis sp. D7 Ad148 25 Ad1883 Ad1885 Ad1145 Ad 241 Ad1915 Ad1999 Ad 2000 Ad 2001 Ad1381 127 Ad1323 26 Ad374 Ad997 168 A00C067 Chiken liver Water Ground Cockerel Gizzard Environmental sample Poultry Ham Chicken meat Turkey skin Poultry Guacamole Chicken Chicken meat Chicken meat Chicken meat Chicken meat Water Raw milk Whole egg Whole egg Food sample Beverage Duck meat Cockerel 47 Enterobacter Enterococcus Enterococcus Enterococcus Enterococcus Enterococcus Escherichia Escherichia Escherichia Escherichia Escherichia Escherichia Escherichia Flavobacterium Flavobacterium Gluconobacter Gluconobacter Hafnia Hafnia 58 Klebsiella 59 60 61 62 63 64 65 66 67 68 69 70 71 72 Lactobacillus Lactobacillus Lactobacillus Lactobacillus Lactobacillus Lactobacillus Moraxella Moraxella Myroïdes Ochrobactrum Ochrobactrum Ochrobactrum Ochrobactrum Pandoraea Ad405 Ad379 Ad372 85L905 Ad373 Ad1906 49.7 51.11 odoratiminus Ad1341 pseudintermedius Ad1057 pseudintermedius Ad1058 sp. Ad1916 sp. Ad2006 sp. Ad1882 ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) Brucella: 48h CampyFood Agar (CFA): 40-48h at 41.5°C VITEK MS VITEK MS test V3.1 test V3.1 Colony Confirmation Confirmation result result st / + st / st / No result st / st / - st st st st st st st + + + + st st st st st st st st / / / / / / / / / / / / / / / No result No result No result - Turkey skin st / - Meat Food sample Delicatessen Meat Delicatessen Duck meat Chicken Chicken Whole egg Turkey skin Turkey skin Chicken meat Pork faecum / st st st st st st st st st + + + + + / / / / / / / / / - No result No result No result - 76/78 December 29, 2016 bioMérieux EXCLUSIVITY n° 73 74 75 76 77 78 79 80 Strain Petrobacter Photobacterium Plesiomonas Providencia Pseudomonas Pseudomonas Pseudomonas Pseudomonas 81 Pseudomonas 82 83 84 85 Pseudomonas Pseudomonas Pseudomonas Pseudomonas succinimandens phosphoreum shigelloïdes stuartii aeruginosa fluorescens fragi otitidis pseudo alcaligenes putida putida sp. stutzeri 96 97 98 99 10 Yersinia 0 Ad1592 Water Ham Poultry Process water Water Environmental Ad1588 sample Ad1343 Whole egg Ad1059 Turkey skin DSM17512 / 87a Gizzard EN15/34 Trout Ad2002 Chicken leg CIP82.49T / Swimming pool Ad1367 water st + + st / / - st / - st + + st st + st / / / / - st / - sp Ad1324 Whole egg st / - aureus alginolyticus cholereae parahaemolyticus Ad906 Ad1888 Ad1887 CIP75.2 Sausage Olster Fish filet / st st st st / / / / - enterocolitica A00C066 Cockerel st / - psychrophilus mannitolilytica mannitolilytica liquefaciens putrefasciens flexneri sonnei Sphingobacteriu m Staphylococcus Vibrio Vibrio Vibrio / Salmon Fish Poultry meat River water Ham Whole egg Skin meat - 87 88 89 90 91 92 93 95 Ad423 Ad1506 Ad673 46 Ad1528 J2 Ad1327 Ad1880 / veronii 94 Shigella Origin st 86 Pseudomonas Psychrobacter Ralstonia Ralstonia Serratia Shewanella Shigella Shigella Reference Brucella: 48h CampyFood Agar (CFA): 40-48h at 41.5°C VITEK MS VITEK MS test V3.1 test V3.1 Colony Confirmation Confirmation result result st / No result st / st / st / st / st / st / st / No result sp ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) J7 4 Ad 2004 Ad1593 77/78 December 29, 2016 bioMérieux Figure 2 - Example of the results provided by the software ADRIA Développement Summary report (Version 0) CampyFood Agar (CFA) 78/78 December 29, 2016
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