1949 Journal of Cell Science 107, 1949-1957 (1994) Printed in Great Britain © The Company of Biologists Limited 1994 Dephosphorylation of the largest neurofilament subunit protein influences the structure of crossbridges in reassembled neurofilaments Takahiro Gotow1,*, Toshihisa Tanaka2, Yu Nakamura2 and Masatoshi Takeda2 Departments of 1Anatomy and 2Neuropsychiatry, Osaka University Medical School, Suita, Osaka 565, Japan *Author for correspondence SUMMARY Phosphorylation-dependent change in electrophoretic mobility is the most unique characteristic of NF-H, the largest molecular mass subunit of the neurofilament. We dephosphorylated NF-H using Escherichia coli alkaline phosphatase, then reassembled it into neurofilaments with NF-M and NF-L, and into NF-H filaments with NF-H alone. We compared these dephosphorylated filaments with control: projections by low-angle rotary-shadow, crossbridges by quick-freeze deep-etch, and core filament packing density by thin-section electron microscopy. Projections in the dephosphorylated filaments were basically similar in structure to those in control, although there was a tendency for them to be wider and less dense, especially in NF-H filaments. Dephosphorylated filaments were still able to form crossbridges between core filaments, but their crossbridges were significantly wider, less dense, more branched and more irregular than crossbridges in control, and core filaments were more densely packed. These structural differences may be brought about by the removal of phosphate groups from NF-H tail and consequent reduction of electrostatic repulsion between adjacent crossbridges extending from the same core filament. The results indicate that phosphorylation of NF-H is necessary for forming well developed crossbridges, straight and at constant intervals, like those of in vivo axonal neurofilaments. INTRODUCTION 1985; Glicksman et al., 1987; Lee et al., 1987; Gotow and Tanaka, 1994a). Morphological organization of NFs is also different (Hirokawa et al., 1984; Tytell et al., 1988; Gotow and Tanaka, 1994a): core filaments of axonal NFs align regularly and are extensively crossbridged while those of perikaryal or dendritic NFs are oriented randomly, are less crossbridged, and are sometimes fascicled (Hirokawa et al., 1984). We think that the most significant structural difference between axonal NFs and perikaryal or dendritic NFs is the development of the crossbridge. Well-developed crossbridges connect core filaments and may align them parallel to each other. Lessdeveloped or irregular crossbridges, may be unable to align core filaments parallel to each other. Conversely, where NF parallel alignment is required crossbridges must be frequent, where parallel alignment is not required crossbridges must be rare. If crossbridges do not appear, core filaments contact each other directly, as is seen in fascicled NFs in perikaryon or dendrite (Hirokawa et al., 1984). For the present study, to observe how NF ability to form crossbridges is altered by dephosphorylation, we reconstructed NFs from triplet proteins and from NF-H alone. We examined these with low-angle rotary shadowing and with quick-freeze deep etching. We obtained the triplet proteins from myelinated axonal NFs because the NF-H of these NFs is heavily phosphorylated (Watson, 1991). Further, we believe that our quickfreeze deep-etch electron microscopy, with reassembled NFs Neurofilaments (NFs) are composed structurally of two distinct portions, a central 10-12 nm wide filament portion, called core filament, and a 4-5 nm wide fluffy portion extending laterally from the core filament called projections (Hisanaga and Hirokawa, 1988; Mulligan et al., 1991; Gotow et al., 1992). Projections form crossbridges when two or more NFs are close enough to each other to interact (Gotow et al., 1992). The core filament is considered to be constructed from the aminoterminal head and central helical rod domains of all subunit proteins, and the projection from the carboxy-terminal tail domains of NF-H and NF-M (Hisanaga and Hirokawa, 1988; Mulligan et al., 1991; Shaw, 1991; Gotow et al., 1992). Of the NF subunits, the two with larger molecular mass, NF-M and NF-H, are provided with considerable amounts of phosphates in their extremely extended carboxy-terminal tail domains (Geisler et al., 1983, 1984; Julien and Mushynski, 1983; Carden et al., 1985). Major phosphorylation sites are considered to be located at serine residue in the characteristically repeated sequence of amino acids (Lys-Ser-Pro) of these tail domains (Geisler et al., 1987; Lee et al., 1988). The degree of phosphorylation of NF-M and NF-H, especially of NF-H, is different in each neuronal compartment, being high in the axon, but extremely low in the perikaryon and dendrite (Sternberger and Sternberger, 1983; Carden et al., Key words: neurofilament, phosphorylation, projection, crossbridge, quick-freeze deep-etch electron microscopy 1950 T. Gotow and others attached to mica (Heuser, 1983), provides a more accurate image of the interactions of these molecules than any other morphological approach. MATERIALS AND METHODS Isolation of crude NFs Bovine spinal cords were obtained from a local slaughterhouse. The white matter of the spinal cords was dissected, minced, and homogenized with a Dounce homogenizer in 0.85 M sucrose in 10 mM BisTris buffer, pH 6.5, containing 0.2 M KCl, 10 mM MgCl2, 2 mM EGTA and 1% Triton X-100. Myelinated axons were obtained by the axonal floatation method as described by Yen et al. (1976). Myelin sheaths were removed by osmotic shock and vigorous homogenization in the Bis-Tris buffer, and the pellet was centrifuged at 100,000 g for 30 minutes at 4°C, and recentrifuged in 0.85 M sucrose in the Bis-Tris buffer (~1.0 mg protein/ml). Purification of NF triplet proteins Crude NFs were dissoved in 10 mM Bis-Tris buffer, pH 6.5, containing 8 M urea, 1 mM EGTA and 1% β-mercaptoethanol, and the NF subunits isolated by gradient chromatography (0-0.25 M NaCl) with DEAE cellulose (DE-52; Whatman) (Liem, 1982; Tokutake et al., 1984). After glial fibrillary acidic protein passed through the column, the first protein peak obtained was NF-H. The proteins of the second broad peak obtained were NF-M and NF-L. Each purified NF Fig. 1. SDS-PAGE of NFs (A) and NF-H filaments (B). (A) NFs reassembled from purified triplet proteins. (B, lanes 1-3) NF-H filaments reassembled from purified NF-H alone. (B, lane 4) Untreated NF-L and NF-M for comparison. Lanes 1-3, incubated at 37°C for 5 hours in 50 mM Tris buffer, pH 8.5. Lane 1, control. Lane 2, NF-H dephosphorylated with 2 units of alkaline phosphatase (ALP). Lane 3, NF-H dephosphorylated with 20 units of ALP. (H,M,L) Positions for NF-H, NF-M, NF-L. Partial dephosphorylation of NF-H is demonstrated by mobility in lane 2 and almost complete dephosphorylation by increasing mobility in lane 3. Fig. 2. Low-angle rotary-shadow electron micrographs of reassembled NFs. (A) Control. (B) Dephosphorylated with 20 units of ALP. There appears to be no distinct difference in structure between control and dephosphorylated NFs. Most are composed of long core filaments and numerous projections, but there are also many with short or fragmented core filaments. Projections are 4-5 nm wide. Wider ones (~5 nm) (arrows) appear especially in dephosphorylated NFs. Bar, 100 nm. Phosphorylation-dependent NF structure 1951 Fig. 3. Quick-freeze deep-etch electron micrographs of reassembled NFs. (A) Control. (B) Dephosphorylated with 2 units of ALP. (C) Dephosphorylated with 20 units of ALP. (A) NFs consist of core filaments (arrowheads) and crossbridges (arrows). Where core filaments are close together, crossbridges are thin (4-5 nm), straight, and relatively regular. (B and C) Crossbridges are less conspicuous and less regular. Although some are as thin as those in control, most are wider and branched (arrows). They appear the same in both 2 units and 20 units ALPtreated samples. In (C), two or more core filaments are close enough to be almost attached to each other without the intervention of crossbridges (arrowheads). Bar, 100 nm. subunit was collected and concentrated to a protein concentration of 1.0 mg/ml. They were then dialysed in 50 mM Tris-HCl (pH 8.5) containing 2 mM MgCl2, 1 mM EGTA and 0.1 mM DTT. Enzymic dephosphorylation of NF-H and reassembly of NFs and NF-H filaments NF-H was dephosphorylated by incubation with 2 units or 20 units of E. coli alkaline phosphatase (ALP) (type III; Sigma Chemicals) per milligram of protein in 50 mM Tris buffer, pH 8.5, containing 2 mM MgCl2, 1 mM EGTA, 0.1 mM DTT, 0.1 mM phenylmethylsulfonyl fluoride and 0.1 µg/ml leupeptin for 5 hours at 37°C. The samples were applied to a Sephacryl S-200 (Pharmacia) gel filtration column for removing ALP. Control NF-H was incubated in the same way without ALP. Dephosphorylated NF-H and control NF-H (~1 mg/ml) were polymerized in 0.1 M MES buffer (pH 6.5) containing 0.17 M NaCl and 1 mM EDTA at 37°C for 5 hours for NF-H filaments, and in combination with NF-M and NF-L (~1 mg/ml), at volume ratio 1:1, for NFs. Some NFs and some NF-H filaments were analyzed by SDS-PAGE 1952 T. Gotow and others on 7.5% gels (Laemmli, 1970) and stained with Coomassie Blue. The remainder were used for electron microscopy. Quick-freeze deep etching Quick-freeze deep-etch electron microscopic samples of reassembled NFs and NF-H filaments were prepared according to the method of Heuser (1983) (Gotow et al., 1992). A fixed tissue block was placed on an aluminum freezing disc and the surface covered with a thin layer of homogenized mica flakes. Then a small amount (~10 µl) of NF solution (0.5 mg protein/ml) was dropped on the thin layer of mica flakes and the specimen quick frozen in a Polaron E7200 by slamming against a copper block cooled by liquid helium. Frozen sample was mounted on a Balzers BAF 400D apparatus, and only the surface fractured carefully in a vacuum of more than 2× 10 mbar. The specimen holder was at −120°C at fracture, and warmed to −95°C for 3-4 minute etching. The sample was then rotary replicated with platinum/carbon at an angle of 25°. The thickness of replica (~2.5 nm) was controlled with a quartz crystal monitor. Replicas were placed in household bleach, treated with hydrofluoric acid, picked up on grids and examined in a JEOL 100CX electron microscope operated at 80 kV. Low-angle rotary shadowing Low-angle rotary-shadow electron microscopic samples were prepared according to the method of Tyler and Branton (1980). A small amount of the reassembled filaments in the buffer solution was mixed with glycerol to adjust the concentration of NF protein to 50100 µg/ml and of glycerol to 50%. Then a small sample of the mixture (100 µl) was sprayed onto freshly cleaved mica attached to the specimen holder of Balzers freeze-fracture apparatus. The sample was mounted in this freeze-fracture apparatus at room temperature, then rotary shadowed at an angle of 6°, in a way similar to the above quickfreeze deep-etch method. Replicas in mica were floated off onto water, picked up on grids and examined in the electron microscope. Thin section Control and dephosphorylated NFs were precipitated by centrifugation at 15,000 g for 30 minutes and then fixed with 2% glutaraldehyde in 50 mM Bis-Tris buffer, pH 6.5, containing 0.17 M NaCl and 1 mM EDTA. The samples were then post-fixed with 2% OsO4, and stained en bloc with 2% uranyl acetate. After dehydration with ethanols, the samples were embedded in Luveak 812. Thin sections were cut, stained with uranyl acetate and lead citrate, and examined in the electron microscope. Quantification Projection and crossbridge structure of control and dephosphorylated NFs and NF-H filaments were compared quantitatively using morphometric analyses of quick-freeze deep-etch and low-angle rotaryshadow preparations. Length and density of projections were measured in rotary-shadow samples, and width, density, and length of crossbridges from core filament wall to the first branching, in deepetch samples. Packing density of core filaments was also compared in thin sections. Measurements were made using a pair of vernier calipers on micrographs at final magnification of more than ×150,000 for density, length and packing density, and more than ×300,000 for width. Density of projections and crossbridges was calculated along one side of core filaments. Magnification was calibrated by phyrophyllite (0.45 nm). All structural parameters measured were statistically compared by Student’s t-test. RESULTS NFs reassembled from triplet proteins with dephosphorylated NF-H When these NFs, with NF-H dephosphorylated either by 2 units or 20 units of alkaline phosphatase (ALP), were checked by SDS-PAGE, dephosphorylation of NF-H was found to be almost complete with 20 units of ALP, increasing in mobility to the level of the upper portion of NF-M (Fig. 1A), and partial with 2 units of ALP, intermediate in mobility between control and 20 units of ALP (Fig. 1A). Low-angle rotary shadowing Low-angle rotary shadowing showed no distinct difference in structure between control and dephosphorylated NFs (Fig. 2). Core filaments were 20-25 nm wide, smooth and usually up to 1 µm long. Projections were 80-90 nm long, and extended regularly from the core filaments. Projections were 4-5 nm wide, with a few 5-6 nm wide notably in dephosphorylated NFs (Fig. 2B). The density of projections appeared to be unchanged. Both control and dephosphorylated NFs were fundamentally the same in profile as untreated NFs that were reassembled without incubation at 37°C (Gotow et al., 1992), although short fragmented or rod-like core filaments were more conspicuous in the incubated samples. Quick-freeze deep etching Deep etching showed conspicuous differences in structure between control and dephosphorylated NFs. Core filaments looked the same, elongated and 12-14 nm wide, but crossbridges, 20-70 nm long, were considerably different. Core filaments were narrower in quick-freeze deep etching than in low-angle rotary shadowing due to the absence of glycerol decoration, and thus were closer to their natural size. Crossbridges formed from projections were much shorter than two projection lengths or even one. After treatment with ALP, most crossbridges were wider, less dense, less regular in interval and more branching than those in control (Fig. 3A-C). In dephosTable 1. Differences in width, density and length of NF and NF-H filament crossbridges and packing density of NF core filaments in control, 2 units ALP- and 20 units ALP-treated samples Crossbridge Treatment NF NF-H filaments Width (nm) Control 2 units ALP 20 units ALP 4.7±1.0 5.9±1.2 6.3±1.5 4.7±1.1 6.1±1.3 6.2±1.4 Density (no./µm) Control 2 units ALP 20 units ALP 30.4±7.2 22.3±7.0 17.3±6.8 34.3±10.1 22.0±8.9 18.6±8.7 Length (nm) Control 2 units ALP 20 units ALP 30.8±10.2 23.2±8.4 20.9±6.9 31.6±9.6 18.3±6.8 16.0±7.1 Packing density (no./µm) Control 2 units ALP 20 units ALP NF core filaments 312.6±20.9 373.5±31.5 416.9±35.8 Values are mean ± s.d., and were obtained from three independent samples. Width, density and length were from quick-freeze deep-etch samples, and packing density was from thin section samples. Length of crossbridges means the distance from core filament wall to the first branching. By treatment with 2 units of ALP, all these morphological parameters are significantly changed (P<0.001) in both filaments. There are also significant differences in NF crossbridge density (P<0.01) and core filament packing density (P<0.001) between 2 units ALP- and 20 units ALP-treated samples. Phosphorylation-dependent NF structure 1953 Fig. 4. Thin-section electron micrographs of reassembled NFs in the centrifuged precipitates. (A) Control. (B) 2 units ALP-treated sample. (C) 20 units ALP-treated sample. Core filaments align randomly. Packing density of core filaments increases with ALP concentration. Bar, 200 nm. phorylated samples, even where the core filaments were close and relatively parallel to each other, crossbridges were less frequent and more branched. Sometimes there were hardly any crossbridges and core filaments were in almost direct contact with each other (Fig. 3C). Quantification showed significantly that the structural differences were dependent on ALP concentrations (Table 1, Fig. 7). The width of crossbridges was less than 5 nm in control but around 6 nm in dephosphorylated samples (Table 1, Fig. 7A). The density of crossbridges was reduced to little more than half (57%) with 20 units of ALP. The standard deviations for densities were almost unchanged even when the means were reduced drastically (Table 1, Fig. 7B), indicating that variations of the density become higher in dephosphorylated samples, which means that crossbridges are more irregular in interval. The criterion for branching was length of crossbridge portions from the core filament wall to the first branch. With dephos- phorylation, those lengths were reduced gradually down to two thirds of the control with 20 units of ALP (Table 1, Fig. 7C). Thin section As close apposition of core filaments appeared rather frequently in deep-etch samples, we compared packing density of control and 2 units and 20 units ALP-treated NFs using thin sections from corresponding levels of the three centrifuge-precipitated samples (Fig. 4). Core filaments looked shorter than in rotary shadowing and deep etching, probably due to various treatments for thin section, such as chemical fixation, dehydration and embedding. Since they aligned randomly, density was calculated where they were roughly perpendicular to the plane of section. As expected, the packing density significantly increased in dephosphorylated NFs and there was also significant difference between the two ALP-treated samples (Figs 4, 7D, Table 1). 1954 T. Gotow and others Fig. 5. Low-angle rotary-shadow images of NF-H filaments. In rotary shadowing filaments are structurally similar in control (A) and dephosphorylated (B) samples. Projections (arrows), however, are wider and less frequent in B, although their lengths are unchanged. Bar, 100 nm. NF-H filaments reconstructed from NF-H alone Since differences in structure of crossbridges and ability to form bridges were observed in NFs reassembled with dephosphorylated NF-H, and since NF-H is the most essential component for forming crossbridges (Hirokawa, 1984; Leterrier and Eyer, 1987; Hisanaga and Hirokawa, 1988; Gotow et al., 1992), we expected such difference to be enhanced in filaments reassembled from dephosphorylated NFH alone (Fig. 1B). Further, since filaments have core filaments, projections and crossbridges almost the same in appearance and density as those of NFs, even though their core filaments are much shorter than those of NFs, we considered NF-H filaments comparable to NFs for examining characteristics of crossbridges, and better than NFs for showing the effect of ALP on projections or crossbridges. Low-angle rotary shadowing Both control and dephosphorylated samples showed rod-like short core filaments ~20 nm wide, 50-300 nm long, and numerous projections 4-5 nm wide, 70-80 nm long (Fig. 5A,B). Core filaments were much shorter than those in NFs constructed from triplet proteins, and still shorter in dephosphorylated samples than in control. Projections were clearer in dephosphorylated samples, wider (~5 nm as compared with ~4 nm in control) and less frequent, ~15/100 nm in 20 units of ALP, ~20/100 nm in control (Fig. 5A,B). Quick-freeze deep etching Control NF-H core filaments were usually narrower, ~10 nm, than in low-angle rotary shadowing, and also longer, 100-400 nm, probably because they were mechanically broken during vigorous spraying onto the mica. Control crossbridges were numerous, straight, 4-5 nm wide and 20-70 nm long (Fig. 6A). Dephosphorylated crossbridges were wider, less frequent, less regular and more branched (Fig. 6B,C). These structural changes increased in proportion to increase of ALP concentration (Table 1, Fig. 7), and were very similar in both quality and quantity to those observed in NFs. This is a strong indication that the effects of ALP on the crossbridges are reproducible. The width of crossbridges was less than 5.0 nm in control but 6.0 nm and more with dephosphorylation (Table 1, Fig. 7A). Density declined with increasing ALP concentration (Table 1, Fig. 7B). Although mean density was reduced by almost half, to 54% in 20 units of ALP, standard deviations were little changed, indicating an increase of irregularity in interval by dephosphorylation. The incease in width and decrease in density of crossbridges observed in the deep etching appeared to correspond to the increase in width and decrease in density of projections observed in the rotary Phosphorylation-dependent NF structure 1955 Fig. 6. Quick-freeze deep-etch images of NF-H filaments. In control (A), the core filaments (arrowheads) are extensively crossbridged. Even where they are far apart, there are relatively many bridges (arrows). In dephosphorylated samples (B and C), crossbridges are wider, more irregular and more branched. The branchings are more conspicuous than those of NFs (Fig. 3) and form honeycombed pattern (arrows). Bar, 100 nm. shadowing. Length of crossbridge portions from core filament to the first branch declined gradually to about half, 51%, of control (Table 1, Fig. 7C). Branching was much more notice- able in dephosphorylated NF-H filaments than in dephosphorylated NFs, even where the core filaments were close in a honeycomb-like pattern (Table 1, Fig. 6B,C). 1956 T. Gotow and others Fig. 7. Graphic representation of the influence of dephosphorylation on the morphological parameters. Differences in width (A), density (B) and length (C) of NF and NF-H filament crossbridges, and packing density (D) of NF core filaments in control, 2 units ALPand 20 units ALP-treated samples. Values in these graphs were obtained from Table 1. DISCUSSION The drastic shift in electropholetic mobility of NF-H on SDSPAGE after dephosphorylation (Carden et al., 1985; Glicksman et al., 1987; Lee et al., 1987) suggests that there must be a phosphorylation-dependent change in function and conformation of the NF-H tail domain (Shaw, 1986; Glicksman et al., 1987; Eyer and Leterrier, 1988; de Waegh et al., 1992; Gotow and Tanaka, 1994a). However, no substantial evidence has yet been produced that the carboxyl-terminal tail domain of NF-H is structurally alterable by phosphorylation (cf. Matus, 1988; Nixon and Sihag, 1991; Nixon and Shea, 1992). Using lowangle rotary shadowing and quick-freeze deep etching, Hisanaga and Hirokawa (1989) have tried to see in crude NFs the relationship between phosphorylation and change in projection structure, or ability to form crossbridges. They found no morphological influence of NF phosphorylation on projections or crossbridges, and concluded that change in phosphorylation state did not affect the ability to form crossbridges. For the present study we followed that of Hisanaga and Hirokawa (1989) with slightly modified methods. We used NFs polymerized from NF-L, NF-M and dephosphorylated NF-H, and NF-H filaments polymerized from dephosphorylated NF-H alone. We also used the mica technique for quick-freeze deep etching designed by Heuser (1983) to prevent NF proteins from becoming tightly condensed by centrifugation, and allow them to be freely suspended in the physiological solution and lightly attached on mica surface. In our specimens, although changes were detectable in the rotary-shadow sample, especially in the NF-H filament, changes were remarkable in the deep-etch sample: in both kinds of reassembled filaments crossbridges were more branched and less regular in interval in dephosphorylated samples than in phosphorylated (control) ones. And following our observations in the deep-etch sample, the increase in width of projections was noticeable in the rotary-shadow sample. In the rotary-shadow samples of Hisanaga and Hirokawa (1989) also, although they did not mention it, the profile of projections is more evident in dephosphorylated than in phosphorylated sample. Their rotary-shadow projections, however, as well as ours, appeared the same in extension in both control and dephosphorylated conditions. We believe this image may be related to processes in the preparation, such as heavy decoration of glycerol or strong spraying. It may be thought that the structural alteration of crossbridges we observed is brought about by proteolysis with endogeneous proteases, because dephosphorylation makes NF-H degrade easily (Goldstein et al., 1987; Pant, 1988). We reject this as a possibility, however, because the projections we observed, a possible morphological representation of polypeptide chains, were not influenced in length, and the SDS-PAGE showed no detectable band for degradation of NF-H in dephosphorylated samples. We found a similar relationship between NF-H phosphorylation and crossbridge development in our recent study using aluminum-intoxicated rabbit brain (Gotow and Tanaka, 1994b): NFs accumulated by aluminum in dendrite or perikaryon, with core filaments less regularly oriented but similar in density to those in axon, had significantly less phosphorylated NF-H than axonal NFs, and fewer, shorter and more branched crossbridges. Increase in width and branching of crossbridges may come from a common cause. When their highly charged phosphate groups are removed by ALP, NF-H tail polypeptide chains constituting crossbridges are unable to repel adjacent bridges electrostatically (Carden et al., 1987; Glicksman et al., 1987; Matus, 1988; de Weagh et al., 1992), and tend to be close to or attached to each other, resulting in greater width or more branching. Thus, phosphorylation may be necessary for the crossbridges to electrostatically repel adjacent bridges deriving from the same core filaments and to extend straight and regularly, so that neighboring core filaments may align parallel to each other. The charge of these phosphates may be influenced by adjacent highly charged amino acids, such as glutamic acid and lysine residues (Geisler et al., 1985; Myers et al., 1987; Lees et al., 1988). 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