The Horse Homolog of Congenital Aniridia Conforms to Codominant Inheritance S. L. Ewart, D. T. Ramsey, J. Xu, and D. Meyers Anterior segment dysgenesis syndrome occurs frequently in Rocky Mountain horses and has two distinct ocular phenotypes: (1) large cysts originating from the temporal ciliary body or peripheral retina and (2) multiple anterior segment anomalies including ciliary cysts, iris hypoplasia, iridocorneal adhesions and opacification, nuclear cataract, and megalocornea. To determine if anterior segment dysgenesis syndrome is heritable in horses we performed ophthalmic examinations and collected pedigree information on horses (n 5 516) in an extended Rocky Mountain horse pedigree. Logistic regressive segregation analysis of a subset of animals (n 5 337) in which the ocular phenotypes of progeny and both parents were known indicated that the codominant inheritance model best fit the data. This model predicted cyst phenotype expression in heterozygous animals and multiple anterior segment anomalies in homozygous animals. Several cases of nonpenetrance of the cyst phenotype were detected in one lineage. The close resemblance between the inheritance and lesions observed in Small eye mice and rats, humans with congenital aniridia or anterior segment malformation, and horses with anterior segment dysgenesis syndrome supported the conclusion that anterior segment dysgenesis syndrome in the horse may be homologous to similar ophthalmic anomalies in other species. From the Departments of Large Animal Clinical Sciences ( Ewart) and Small Animal Clinical Sciences (Ramsey), College of Veterinary Medicine, Michigan State University, East Lansing, Michigan 48824, and the Center for the Genetics of Asthma and Complex Diseases, University of Maryland, Baltimore, Maryland ( Xu and Meyers). This work was supported in part by grants from the Harvey Fiege Genetic Research Fund, College of Veterinary Medicine, Michigan State University, and the Michigan Animal Health Foundation. The authors thank Patrick Venta for thoughtful review of the manuscript and Carrie Begin, Kristi Patterson, and Julie Vantine for technical assistance. Address correspondence to Susan L. Ewart at the address above or e-mail: [email protected]. q 2000 The American Genetic Association 91:93–98 Genetic defects that result in heritable abnormalities can be a significant source of morbidity within affected pedigrees. Animals in small breed registries are generally derived from small gene pools. Similarly gene pools can be selectively limited by intensively breeding individuals with desired characteristics. In these situations the risk of propagating undesirable traits is also amplified. This has been illustrated recently in the quarter horse breed, where selective and intensive breeding of one blood line that carried a dominant mutation for a sodium channel defect resulted in the widespread occurrence of the associated disease hyperkalemic periodic paralysis ( HYPP) (Rudolph et al. 1992). The Rocky Mountain horse is a new and rapidly expanding pleasure horse breed with a registry established in 1986. Many Rocky Mountain horses descend from a single foundation sire. We recently described an ophthalmic disease with two distinct phenotypes in Rocky Mountain horses (Ramsey et al. 1999). Large fluidfilled cysts arising from the temporal ciliary body and peripheral retina characterized one ocular phenotype detected in this breed. The other phenotype was a syndrome of multiple anomalies of the anterior segment consisting of ciliary and/or retinal cysts, severe iris hypoplasia, iridocorneal adhesions, peripheral corneal opacification, and nuclear cataract. Affected horses had abnormal pupillary light responses and pupils did not dilate after instillation of mydriatic drugs. Some of the horses with multiple anterior segment anomalies also had lens subluxation, focal retinal detachment, microphthalmia, megalocornea, macropalpebral fissures, and craniofacial abnormalities. These lesions were congenital and occurred bilaterally in the majority of cases. While individual horses in this group demonstrated a variety of lesions of both the anterior and posterior ocular segments, all the abnormalities were consistent with dysgenesis of the anterior segment as predicted embryologically (Cook 1989; Gruss and Walther 1992) and as described in humans ( Hanson et al. 1993, 1994), mice ( Hill et al. 1991; Walther and Gruss 1991), and rats ( Fujiwara et al. 1994; Matsuo et al. 1993). Thus we refer to this complex ocular phenotype in the horse as anterior segment dysgenesis (ASD), and to the composite disease, which includes cysts and ASD le- 93 sions, as the ASD syndrome (Ramsey et al. 1999). While there are no previous reports that specifically investigate the potential familial inheritance of this ocular disease, it was apparent to veterinarians who work with Rocky Mountain horses that ocular defects occur in this breed at a rate much greater than that seen in other breeds. The objective of the current study was to determine whether the ocular lesions of ASD syndrome are familial, and if so, to characterize the mode of inheritance of this disease. Segregation analysis of ocular phenotypes and pedigree information from 516 horses in an extended Rocky Mountain horse family indicated that lesions of the ASD syndrome were inherited in a codominant manner in these horses. Methods Study Population The index case for this study was an 8year-old Rocky Mountain horse stallion, VIII-124, that was referred to the university teaching hospital for evaluation because he had two generations of progeny that were characterized by the referring veterinarian as having a high incidence of ocular lesions. Eight offspring in the first generation and six offspring in the second generation had been previously noted to have cataracts and purported vision impairment. We examined VIII-124 and six of his progeny. In addition, we examined a large population of Rocky Mountain horses residing in several states in the Midwest ( Illinois, Indiana, Kentucky, Michigan, Missouri, and Ohio). Examined horses were located on 30 farms that housed primarily Rocky Mountain horses. To avoid ascertainment bias, all horses present on each farm were examined, with the exception of five horses on farm C that had been previously examined by another ophthalmologist, and approximately 20 horses on farm D that were not readily accessible. The small number of horses of other breeds present on each farm were examined when available. Five hundred sixteen horses were examined consisting of 342 females and 174 males. The ages of the examined animals ranged from 10 h to 29 years. Clinical Examination Horses were examined for general physical abnormalities. The colors of the coat, mane, and tail were documented. Detailed ophthalmic examinations were performed in a darkened room before and after pu- 94 The Journal of Heredity 2000:91(2) pillary dilation. One percent tropicamide was instilled into the conjunctival fornix to effect pupillary dilation. Ophthalmic examination included direct, focal, and diffuse slit lamp biomicroscopy, applanation tonometry, and indirect ophthalmoscopy. Pedigree Structure Pedigree information was obtained for each horse in the form of a breed association certificate of registration that contained the identification, gender, birthdate, color, markings, and up to four generations of parentage. Based on this information, detailed multigenerational pedigrees were constructed. The study population of 516 horses spanned nine generations of an extended family. Pedigree information alone was available on an additional 232 horses extending back four more generations, so that the completed pedigree contained 748 horses in 13 generations. Segregation Analysis All pedigrees were inspected for evidence of inheritance of ophthalmic abnormalities. Formal segregation analysis was performed on a subset of 337 individuals in 26 families in which offspring and both progenitors were examined. Multiple inheritance models were tested for goodness-of-fit via logistic regression ( Bonney 1986) using the Statistical Analysis for Genetic Epidemiology program procedure REGD (SAGE 1994). Tested models included Mendelian (dominant, codominant, and recessive), environmental, and sporadic models. Comparisons were made between each inheritance model and the general (unrestricted) model to determine whether the restrictions placed on a model significantly decreased its likelihood. If the likelihood of a model differed significantly by chi-square analysis from the likelihood of the general model, the model was rejected. In Mendelian transmission the probability that a parent of type u transmits allele A to the offspring is tAA 5 1, tAB 5 0.5, and tBB 5 0 for u 5 AA, AB, and BB. In our analysis the transmission parameters t for the general model were tAA 5 0.9, tAB 5 0.6, and tBB 5 0. Significant difference from the general model was assigned at P , .05. Penetrance estimates were obtained from the formula P(u) 5 eb/1 1 eb where P is the penetrance of genotype u for u 5 AA, AB, or BB, and b is the baseline parameter (SAGE 1994). Results Clinical Examination Horses were classified on the basis of ophthalmic examination. Approximately half of the horses examined (250/516) had one or multiple large, translucent cysts arising from the temporal ciliary body and/or peripheral retina ( Figure 1a). A smaller group of horses (72/516) had ASD, as characterized by multiple abnormalities of the cornea, iris, lens, and iridocorneal drainage angle ( Figure 1b,c). Two horses had anterior uveitis, but no cysts or ASD. The remaining horses had normal eyes (192/ 516). Horses with ASD lesions always had cysts. These results indicated that two distinct anomalous ocular phenotypes, cysts and ASD, occurred consistently and reproducibly in Rocky Mountain horses. The uniformity of observed lesions throughout a large population of Rocky Mountain horses suggested a common cause for these abnormalities. Pedigree Structure Pedigree information was available for all 516 horses examined. Pedigree information obtained from the registration papers of the unexamined horses was also used for the purposes of constructing genealogies. The final pedigree contained 748 horses in 13 generations. Offspring and both progenitors were examined in 26 families composed of 337 individuals ( Table 1). One stallion ( IV-7) was noted to be present in the ancestry of a large number of affected and unaffected horses in the extended pedigree, and 303 of the 322 horses affected with cysts or ASD were reported to descend from IV-7. The pedigrees of all horses in the extended family were examined to determine the extent of common ancestry: 372 horses could be traced to IV7 through one progenitor, 266 horses could be traced to IV-7 through both progenitors, and 110 horses could not be definitively traced to IV-7. Horses examined were in generations 5-13 of the pedigree or were unrelated to IV-7. Seven first-generation offspring of IV-7 were examined and found to have either cysts or normal eyes ( Figure 2). The index case, VIII-124, had ASD lesions and was a fourth-generation descendent of stallion IV-7 ( Figure 2). Five of six offspring of VIII-124 had cysts and one had normal eyes. Segregation Analysis The dominant, environmental, and sporadic models were rejected in the segregation Figure 1. Ocular photographs of horses affected with ASD syndrome lesions. (a) A cyst of the temporal ciliary body of the right eye is evident in the pupillary aperture. (b) Photograph of the iris of a horse with ASD. Iridial hypoplasia is characterized by iris sheets and a circumferentially located, flattened granula iridica. The pupil is also dyscoric. (c) Photomicrograph of the iris ( I) of a horse with ASD. The iris is hypoplastic and the granula iridica is flattened. Note the dysplastic ciliary body epithelium and primitive and immature retinal tissue (arrows) present on the posterior side of the iris. * indicates cornea. analysis because the likelihoods of these models differed significantly from that of the general model based on the chi-square test ( Table 2). The codominant model was the most parsimonious model and its likelihood was not significantly different from that of the general model. The likelihood of the recessive model was also not different from that of the general model, however, it did not fit the data as well as the codominant model. The codominant inheritance model predicted that the cyst phenotype was expressed in heterozygous animals and the ASD phenotype was expressed in homozygous animals. The penetrance estimate for the cyst phenotype was 60.35% for AB, 99.86% for BB, and approached zero for AA. For the ASD phenotype the penetrance estimate was 99.87% for BB and approached zero for AB and AA. Based on the hypothesis that obligate heterozygotes should have cysts, nonpenetrance was theorized in 10 unaffected offspring that derived from progenitors with ASD and 3 unaffected progenitors that produced offspring with ASD ( Figure 3). All but one ( VI-57) suspected nonpenetrant cases could be traced to stallion VI-38, who was a backcross progeny of the founder stallion ( Figure 2). Numerous additional descendants of VI-38 did not demonstrate altered penetrance of Table 1. Phenotypes of progenitors and offspring in 26 families with ASD syndrome Sire n Dam n AA AA 0 AA AB 2 AA BB 0 AB AA 65 AB AB 61 AB BB 18 BB BB BB a 2 144 27 AA AB BB 11 16 0 Offspring n AA AB BB AA AB BB AA AB BB AA AB BB AA AB BB AA AB BB AA AB BB AA AB BB AA AB BB Expected Perpercentcentage age a 100 2 100 50 50 100 33 28 4 14 20 27 50.8 43.1 6.2 23 32.8 44.3 50 50 10 8 6 5 55.6 44.4 54.5 45.5 100 2 9 5 12.5 56.3 31.3 50 50 25 50 25 50 50 100 Phenotypes: AA 5 unaffected, AB 5 cysts, BB 5 ASD. The percentage of progeny expected in each category based on a fully penetrant codominant inheritance model. Figure 2. Pedigrees demonstrating the relationship between the founder stallion ( IV-7), the proband ( VIII-124), and the common ancestor for nonpenetrance of the cyst phenotype ( VI-38). A indicates horses that derive from IV-7 where complete relationships are not shown for simplicity. Open symbols indicate unaffected subjects; halffilled symbols indicate subjects affected with cysts; solid symbols indicate subjects affected with ASD; symbols enclosing question marks indicate unexamined subjects. Ewart et al • Codominant Inheritance of Anterior Segment Dysgenesis in Horses 95 Table 2. Results from regressive logistic modeling (REGD) using 337 individuals in 26 families with ASD syndrome t Model qA General Environmental Codominant Dominant Recessive Sporadic .33 .69 .48 .65 .38 [1] 0.9 0.3 NA NA NA NA 0.6 0.3 NA NA NA NA Cyst phenotype 0.0 0.3 NA NA NA NA ASD phenotype bAA bAB bBB bAA bAB bBB 22ln df x2 Pa 232.0 0.99 25.24 261.0 20.62 0.26 1.76 21.43 0.42 7.22 20.62 0.26 21.98 4.41 6.53 7.22 5.94 0.26 33.2 25.45 256.6 245.1 236.2 20.68 250.1 21.29 253.1 6.29 236.2 20.68 22.83 3.78 6.65 6.29 5.53 20.68 641.9 673.3 648.4 672.2 652.1 684.5 NA 2 3 5 5 11 NA 31.4 6.5*† 30.3 10.2* 42.6 10 8 7 5 5 2 qA 5 allele frequency for unaffected allele; t 5 transmission probability; b 5 baseline parameter for genotypes AA, AB, and BB; 22ln 5 22ln( likelihood); df 5 degrees of freedom; Pa 5 number of parameters estimated; NA 5 not applicable for the given model. * Codominant and recessive models were not significantly different from the general model at P , .05. † Codominant model was the most parsimonious. the cyst phenotype. In addition to common heritage through VI-38, progeny of select sires were particularly predisposed to nonpenetrance. Stallion VII-50 had ASD and yet produced 4 foals with normal oc- ular phenotypes ( Figure 3a), along with 12 foals with cysts, and 8 foals with ASD (data not shown). Similarly, stallion X-107 had ASD and produced five foals with normal eyes ( Figure 3b), six foals with cysts, and no foals with ASD (data not shown). Stallion VIII-124, the index case, had ASD and produced one foal with a normal ocular phenotype ( Figure 3a), five foals with cysts, and no offspring with ASD (data not shown). Nonpenetrance was also suspected in several phenotypically unaffected horses based on their production of offspring with ASD. Phenotypically unaffected mares VI-57 and IX-5 were each bred to multiple stallions (total of six matings with six stallions) and five of the mating produced progeny with ASD ( Figure 3b). Nonpenetrance in the two mares was hypothesized to be more likely than phenocopy in the five offspring due to the repeated nature of the event in each mare. While mare VI-57 was a descendent of the founder stallion, she was not a descendent of VI-38, however, three of the four stallions she was bred to did derive from VI-38. It is more difficult to support either nonpenetrance or phenocopy hypotheses in horse X-42, who had ASD and was the progeny of an unaffected mare, IX-30, and an unexamined stallion, IX-90 ( Figure 3b). In contrast, nonpenetrance was strongly suggested in horse VIII-134, a phenotypically unaffected mare derived from a sire with ASD ( VII-50), as VIII-134 was mated to a stallion with cysts ( IX-24) and subsequently produced a male offspring with ASD ( X-83) ( Figure 3a). Discussion Figure 3. Nonpenetrance of the cyst phenotype traced to a common ancestor ( VI-38) and predisposition for nonpenetrance was further clustered in select families. Nonpenetrant cases are denoted by *. A indicates horses that derive from IV-7 and B indicates horses that derive from VI-38 where complete relationships are not shown for simplicity. (a) Nonpenetrance of the cyst phenotype in four normal progeny of a stallion with ASD ( VII-50) and one normal offspring of the proband ( VIII-124). Other progeny of these stallions together include 17 offspring with cysts and 7 offspring with ASD (data not shown). (b) Nonpenetrance of the cyst phenotype in five normal offspring of a stallion ( X-107) with ASD. X-107 also produced six offspring with cysts (data not shown). Mare IX-5 was classified as nonpenetrant as she had normal eyes and yet produced two foals with ASD. Mare VI-57 had normal eyes and did not descend from VI-38, however, she produced three offspring with ASD and one with cysts. Open symbols indicate unaffected subjects; half-filled symbols indicate subjects affected with cysts; solid symbols indicate subjects affected with ASD; symbols enclosing question marks indicate unexamined subjects. 96 The Journal of Heredity 2000:91(2) Our results support the hypothesis that the ophthalmic lesions of cysts and ASD in Rocky Mountain horses were inherited in a codominant manner with cysts expressed in the heterozygous state and complex ASD lesions expressed in the homozygous state. Nonpenetrance of the cyst phenotype appeared to occur in a small number of cases and was associated with a select lineage. A large proportion of the 516 examined horses was affected with one of the disease phenotypes, as 250 horses (48.5%) had retinal or ciliary body cysts and 72 horses (14.0%) had ASD. Our assessment of the prevalence, epidemiology, and genetic model fitting of this disease in Rocky Mountain horses provides the first documented evidence of the heritability of the ASD syndrome in horses. Striking similarities are present between the ocular and craniofacial lesions observed in Smalleye (Sey) mice and rats ( Fujiwara et al. 1994; Hogan et al. 1986), humans with congenital aniridia or malformation of the anterior segment (Glaser et al. 1994; Hodgson and Saunders 1980), and horses with ASD syndrome ( Figure 1). Based on our observations, we hypothesize that the lesions of the ASD syndrome in the horse may be homologous to Sey in mice and rats, and to congenital aniridia in humans. We predict that complete loss of gene function in the horse does not occur from the proposed mutation, based on our observations of comparably mild phenotypes in Rocky Mountain horses. Pedigree analysis of a large number of Rocky Mountain horses with ASD syndrome indicated that stallion IV-7 was common in the ancestry of 303 of 322 affected horses. This raised the possibility that IV-7 carried a mutant allele at the locus encoding the gene causing ASD syndrome, and extensive propagation of this genotype through inbreeding resulted in widespread distribution of this disease. Horse IV-7 was deceased, and therefore it was not possible to determine his ocular status. Horse IV-7 was common in the ancestry of both affected and unaffected horses and is considered a foundation sire for the breed. Because of the frequency of his lineage in the population, we could not determine if he was also a founder of this disease. However, based on the presence of the cyst phenotype in five of the seven examined first-generation progeny of IV-7, it was clear that he carried the mutant allele. We observed no matings between two known unaffected progenitors. This appeared to be related to the high incidence of ocular lesions in stallions selected for breeding. An ascertainment bias toward affected families was not supported, as essentially all horses present at each farm were examined. Ocular phenotypes could not be predicted by external observation alone, therefore owners were not aware of their horses’ ocular phenotypes prior to clinical examination. Our findings of a small number of phenotypically unaffected horses deriving from progenitors with ASD, as well as un- affected horses producing progeny with ASD, confound the codominant inheritance hypothesis. We propose that these cases are the result of nonpenetrance of the cyst phenotype, which may be due to epistatic interactions between a modifier gene and the susceptibility locus or to environmental influence. Twelve of 13 cases of suspected nonpenetrance shared VI-38 as a common ancestor. However, numerous additional progeny of VI-38 did not demonstrate altered expression of the cyst phenotype. Stallion VI-38 was a son of the foundation stallion produced by a backcross mating ( Figure 2). The nonpenetrant cases tended to be clustered in their occurrence. Furthermore, along with their identifying progenitors or progeny, they were located on eight different farms at the time of examination. Thus the presence of a modifier gene acting epistatically with the susceptibility locus to alter disease expression seemed more likely than indeterminate environmental factors. There was a high rate of consanguinity in the pedigrees we studied. Thus while the majority of nonpenetrant cases traced to VI-38, many descendants of VI-38 also traced to the foundation stallion through one or more of his other offspring. Finding nonpenetrance in mare VI-57, who did not descend from VI-38, suggested that modifier genes may not exist exclusively in one branch of the lineage. Furthermore, the high rate of consanguinity made it virtually impossible to definitively localize the origin of a modifier gene to VI-38, despite the fact all but one case with evidence for nonpenetrance shared this common ancestor. Iris hypoplasia in the horse has been previously described in two pedigrees. Eriksson (1955) described aniridia in 109 Belgian horses that derived from a common sire. The ocular phenotype had a dominant mode of inheritance and was characterized by bilaterally large, circular pupils that were nonreactive to light. Progressive lens opacity was also present in a variable number of horses. Joyce et al. (1990) reported that a quarter horse stallion and seven offspring had iris hypoplasia, large, round, and fixed pupils, absence of corpora nigra, and limbal dermoids. One additional offspring had normal eyes. The ocular lesions in these Belgians and quarter horses were distinct from those present in our study population of Rocky Mountain horses. Inherited ophthalmic defects similar to those found in our horse pedigrees have been reported in mice, rats, and humans (Churchill and Booth 1996; Fujiwara et al. 1994; Hogan et al. 1986). Small eye (Sey) is a codominant mutation that causes decreased eye size and delayed closing of the optic cup in mice heterozygous for this mutation. In homozygous animals, Sey causes anophthalmia and lack of nasal primordia ( Hogan et al. 1986). Mice homozygous for Sey die shortly after birth, most likely the result of undeveloped nasal cavities. The rat Small eye strain (rSey) is similar phenotypically to the Sey mouse, as heterozygous rats have small eyes while eyes and nose are lacking in homozygous animals ( Fujiwara et al. 1994). Mutations in the Pax6 gene are reported to cause Sey in mice ( Hill et al. 1991) and rats (Matsuo et al. 1993). Congenital aniridia and anterior segment dysgenesis in humans are ocular phenotypes with considerable overlap between them. Aniridia is an inherited congenital malformation in humans characterized by severe iris hypoplasia. The term aniridia is a misnomer because aniridia is a panocular disorder and is typically associated with cataracts, retinal and ciliary body hypoplasia, and corneal opacification ( Hanson et al. 1993; Nelson et al. 1984). There is considerable variation in expression of the congenital aniridia phenotype, but the manifestations appear to be symmetrical ( Hodgson and Saunders 1980). Diseases of anterior segment dysgenesis in humans are characterized by multiple malformations of the ocular anterior segment and often occur with corneal opacity, microphthalmos, cataract, and dysgenesis of the iris and iridocorneal angle. The variable expression of ocular lesions associated with congenital aniridia and anterior segment dysgenesis in humans is consistent with our findings in the horse in which some lesions were present in all cases (ciliary and/or retinal cysts, iris hypoplasia, iridocorneal adhesions, dyscoria, peripheral corneal opacification, and nuclear cataract), while the presence of other lesions ( lens subluxation, focal retinal detachment, microphthalmia, megalocornea, macropalpebral fissures, and craniofacial abnormalities) varied between cases. Anterior segment dysgenesis mutations may occur spontaneously in humans or they may be familial with variable inheritance patterns (Cook 1989; Holmström et al. 1991). The congenital aniridia phenotype in humans is generally reported to be a dominant trait caused by mutations in the PAX6 gene (Glaser et al. 1994; Schedl et al. 1996). Matings are rarely seen be- Ewart et al • Codominant Inheritance of Anterior Segment Dysgenesis in Horses 97 tween two people affected by this trait, therefore offspring potentially homozygous for congenital aniridia are rare. Until a sufficient number of humans who are homozygous for PAX6 mutations are studied, it will remain unclear whether the trait is truly dominant or, like in mice and rats, whether a more severe phenotype occurs in the homozygous condition ( Hodgson and Saunders 1980). However, the limited number of reports of matings between humans with congenital aniridia present in the literature suggest that homozygous PAX6 mutations may be lethal ( Elsas et al. 1977; Grove et al. 1961; Hodgson and Saunders 1980). For example, a consanguineous couple with congenital aniridia had six pregnancies producing one female child with congenital aniridia, three male children who died within 24 h of birth, and two miscarriages. No documentation of ocular phenotypes was available on the five deceased children (Grove et al. 1961). Another consanguineous couple with congenital aniridia had three children with congenital aniridia and one stillborn child for which there was no documentation of the ocular phenotype ( Elsas et al. 1977). A nonconsanguineous mating in a couple with congenital aniridia produced a stillborn fetus with complete absence of eyes, nose, and adrenal glands ( Hodgson and Saunders 1980). In conclusion, we report that the ASD syndrome is familial in Rocky Mountain horses and is best fit by the codominant inheritance model. Penetrance was not complete for the cyst phenotype and nonpenetrance was clustered in one lineage. 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