Journal of Experimental Botany, Vol. 50, No. 339, pp. 1577–1585, October 1999 Light microscopy of early stages in the symbiosis of soybean with a delayed-nodulation mutant of Bradyrhizobium japonicum Laura S. Green1 and David W. Emerich Biochemistry Department, 117 Schweitzer Hall, University of Missouri-Columbia, Columbia, MO 65211, USA Received 18 March 1999; Accepted 25 June 1999 Abstract An a-ketoglutarate dehydrogenase mutant (LSG184) of Bradyrhizobium japonicum USDA110 has a delayed nodulation phenotype when inoculated onto soybean (Glycine max L.). To pinpoint the defective stage of symbiotic development, light microscopic techniques were used to monitor early responses of soybean to inoculation with the mutant as compared to the wildtype strain. Methylene blue was used to visualize curled root hairs and a convenient haematoxylin staining method was developed that could detect nodule primordia as early as 2 d after inoculation. The results demonstrate that early symbiotic events occur with normal timing after inoculation with LSG184 and that its developmental delay is first evident during the progression of nodule primordia into emergent nodules. The timing of this delay suggests that LSG184 is not deficient in Nod factor production, at least during the early stages of symbiosis, but rather may have a defect in infection thread initiation or elongation. The results further imply that the rate of development of advanced soybean nodule primordia is, in part, dependent on the metabolic capabilities of the invading bacterium. Key words: Soybean, nodulation, light microscopy, haematoxylin, symbiosis. Introduction The successful development of nitrogen-fixing nodules requires ongoing communication between the plant host and the endosymbiotic rhizobium. Some signals involved in controlling symbiotic development, in particular the lipochito-oligosaccharide nodulation factors (Nod factors), have been subject to intensive study over the past decade and their structure, if not their exact mode of action, is well-characterized. Nod factors are diffusible molecules produced by rhizobia in response to chemical signals from the host plant and are required for inducing many of the earliest responses of the host plant to inoculation (Long, 1996). The communication that occurs at subsequent stages of symbiotic development is less well understood. A classic approach to this question has been to analyse mutants of the bacterial partner that show defects in the developmental step of interest (reviewed in Niner and Hirsch, 1998). Such an approach has revealed, for example, the importance of rhizobial extracellular oligo/polysaccharides, lipopolysaccharides, and cyclic b-glucans in infection thread growth and in the suppression of host defence reactions (Stacey et al., 1991; Parniske et al., 1994; Dunlap et al., 1996; Eggleston et al., 1996; Cheng and Walker, 1998). Careful and often painstaking analysis of symbiotic development is required to pinpoint the exact stage that is most affected by a particular rhizobial mutation. A wide range of plant responses have been used as developmental markers for this purpose including root hair curling (van Workum et al., 1998), infection thread formation and morphology (Cheng and Walker, 1998), the synthesis of fluorescent flavonoids (Mathesius et al., 1998), nodule emergence, and the induction of nodulin gene expression (Dunlap et al., 1996). One important event in symbiotic development is the induction of mitotic activity in the cortex of the host root, giving rise to new cells that will eventually form the nodule primordium. The induction of new cell divisions, especially in soybean, has generally been monitored by light microscopic ana- 1 To whom correspondence should be addressed. Fax: +1 314 882 5635. E-mail: [email protected] © Oxford University Press 1999 1578 Green and Emerich lysis of serial sections of fixed and embedded plant roots (Calvert et al., 1984; Mathews et al., 1989; Chatterjee et al., 1990; Gerahty et al., 1992). However, the timeconsuming nature of the serial-sectioning technique has meant that very few rhizobial mutants have been analysed for their ability to induce new cell divisions on soybean. As part of a study of bacteroid carbon metabolism, a mutant of Bradyrhizobium japonicum, the endosymbiont of soybean, that is missing the tricarboxylic acid cycle enzyme a-ketoglutarate dehydrogenase (Green and Emerich, 1997a) was isolated. Surprisingly, this mutant (LSG184), despite its metabolic defect, is capable of forming normal nitrogen-fixing bacteroids when inoculated onto soybean (Green and Emerich, 1997b). However, nodulation by the mutant is delayed by about 5 d relative to the wild type and the nodules formed by the mutant contain a reduced number of infected cells. These results raise the question of why a-ketoglutarate dehydrogenase should be more important during symbiotic development than it is to the subsequent functioning of mature bacteroids. To determine the cause of the delayed nodulation phenotype, an attempt has been made to define more precisely the stage at which the delay first appears. In the present study methylene blue has been used to monitor the formation of curled root hairs and a simple and convenient haematoxylin staining method used to visualize new mitotic activity in the soybean root cortex. The results demonstrate that these early symbiotic events occur with normal timing after inoculation with LSG184 and that the developmental delay is first evident during the transition from nodule primordia to emergent nodules. The timing of this delay is consistent with LSG184 having a defect in infection thread initiation or elongation. Materials and methods Plant material and bacterial strains Soybeans (Glycine max L. cv. Williams 82) were surfacesterilized and sprouted on 1% (w/v) agar/water at 28 °C in covered glass trays. After 2–3 d, when roots were 2–4 cm long, the seedlings were dipped in inoculum and placed into sterile growth pouches (Mega International, Minneapolis, MN ). The position of each root tip was marked on the outside of the pouch with an indelible marker at the time of planting. The pouches were watered initially with 20 ml of sterile, nitrogenfree plant nutrient solution (Ahmed and Evans, 1960) and thereafter with sterile water as required. Pouches were incubated in a growth cabinet with a 16 h photoperiod and a day/night temperature of 27/24 °C. On average, the roots grew 2.5 cm in the first 24 h after transfer into the growth pouches. Inoculum was prepared by growing the bacterial strains to an A of 1.0 to 2.0 in defined media with 20 mM arabinose 630 as the carbon source, ammonium as the nitrogen source, and antibiotics added as appropriate (Green and Emerich, 1997a). Cells were harvested by centrifugation (7 000 g, 5 min, room temperature), washed once with, and finally resuspended in, nitrogen-free plant nutrient solution. Unless otherwise specified, cells were resuspended to an A of 0.1, approximately 630 108 cells ml−1. Strains used were: Bradyrhizobium japonicum USDA110, B. japonicum LSG184 (sucA::Tn10-minikan, a-ketoglutarate dehydrogenase mutant; Green and Emerich, 1997a), B. japonicum nodA2 (nodA::Tn5 mutant; Lamb and Hennecke, 1986), and Sinorhizobium fredii USDA191 and USDA257 (Heron and Pueppke, 1984). Methylene blue staining of curled root hairs Curled root hairs were stained with methylene blue using a procedure modified from Stokkermans and Peters (Stokkermans and Peters, 1994). Root segments of 3 cm, starting from 0.5 cm above the root tip mark, were cut from pouch-grown seedlings. Root segments were soaked in 1% (w/v) sodium hypochlorite (a 153 dilution of commercial bleach, Novel Wash Co. Inc., Dupo, Illinois, in water) for 2 h. Roots were rinsed briefly in deionized water and then incubated for 1 h in 0.01% (w/v) methylene blue in water. Root segments were destained by incubating for 1 h in 35% (w/v) ethanol and 1.5 h to overnight in 70% ethanol, and then observed using a dissecting microscope and bright field illumination. Haematoxylin staining of soybean nodules and nodule primordia A 40× haematoxylin stock (Dudley et al., 1987) was prepared as follows: 2 g of haematoxylin (Sigma catalogue number H-9627) was dissolved in 50 ml of 45% (v/v) acetic acid, filtered and stored at room temperature in a brown glass bottle. The stain gave best results when freshly made but could be used for several weeks. A precipitate gradually formed during storage and staining was greatly improved if the stock was refiltered (or centrifuged) directly before use. Soybean root segments, harvested as described for methylene blue staining, were stained with haematoxylin using a method modified from Dudley et al. (Dudley et al., 1987). Root segments were boiled for 1.5–2 min in lactophenol (32% glycerol, 16% lactic acid, 20% phenol, by vol. in water), the shorter length of time being used for younger roots. Root segments were then blotted on tissue, rinsed in a Petri dish of water for 2 min, and stained overnight in haematoxylin (40× stock diluted 1540 in water just before use). The roots were protected from light during the staining step. After staining, the root segments were destained in water for 1–2 h and then observed under a dissecting microscope using dark field illumination with additional top lighting as needed. Additional destaining was sometimes necessary to improve the contrast between the nodule primordia and the surrounding root tissue, especially if the haematoxylin stain was several weeks old. In this case the root segments were soaked in 20 mM HCl for 0.5–1 h and then returned to water for observation. Haematoxylin-stained structures were counted on one side of each root segment, with eight segments in each sample. For observations at higher magnification, 100 mm thick Vibratome sections were prepared from haematoxylin-stained root segments, mounted in water, and viewed under dark field or Nomarski optics. Results Methylene blue staining of curled root hairs One of the earliest morphological changes to follow inoculation is the induction of root hair curling. To determine whether the delay in nodulation by LSG184 is accompanied by a delay in root hair curling, the root Delayed nodulation mutant 1579 hairs of soybean seedlings were examined at various intervals after inoculation with the mutant or the wildtype parental strain, USDA110. Curled root hairs were very difficult to see on unstained roots, but stained deep blue and were readily observable after treating the roots with methylene blue ( Fig. 1A). Similar methylene blue staining of curled root hairs was previously reported for Glycine soja inoculated with B. japonicum ( Eskew et al., 1993). The stained, curled root hairs occurred in dense patches at irregular intervals along the root ( Fig. 1A) and were present by 48 h after inoculation with USDA110 or LSG184 ( Fig. 1A, B). There was no observable delay in the induction of curled root hairs by the mutant, although the response, in terms of the number and size of the stained root hair patches, appeared to be slightly weaker. Methylene blue-stained root hairs never occurred on roots inoculated with a nodA mutant of B. japonicum or on uninoculated controls (Fig. 1C, D). The fact that staining was never observed after inoculation with the nodA mutant suggests that methylene blue stained the curled root hairs themselves rather than films of bacteria on the surface of the root or on the root hairs. Haematoxylin staining of soybean nodule primordia Soybean root segments inoculated with USDA110 and stained with haematoxylin after 3 d showed small, darkly stained patches of cells distributed over their surface (Fig. 2A). At higher magnification these patches appeared to be made up of small, presumably newly-divided cells in the outermost layers of the cortex. Small patches of these darkly stained cells could be observed as early as 2 d after inoculation (Fig. 2B) and were never observed on uninoculated roots. At longer time intervals after inoculation a small subset of the darkly stained patches of cells enlarged and developed into emergent nodules ( Fig. 2C–F ). Initially the nodule primordium cells stained dark brown, but as the primordia assumed a more rounded shape the cells in the interior took on a purplish hue. When present on the root segments, the root tip and lateral root meristems also stained deep purple ( Fig. 2A). The lateral root meristems could be distinguished from the nodule primordia by their emergence from deeper within the root cortex and by having a more pointed apex. To view the presumptive nodule primordia at higher magnification, 100 mm Vibratome sections were cut from haematoxylin-stained root segments (Fig. 3). The haematoxylin-stained cells are clearly smaller than those in the surrounding tissue, implying that they had undergone recent cell divisions ( Fig. 3A, C ). In agreement with earlier studies (Calvert et al., 1984), the new crosswalls in these young primordia were predominantly anticlinal ( Fig. 3B). Even as early as 2 d after inoculation some primordia showed anticlinal divisions extending several layers down into the root cortex (Fig. 3B). These observations validated haematoxylin staining as a method to monitor the formation of nodule primordia. For the purposes of further experiments the developing nodules were divided into three broad categories: foci, domes, and nodules. ‘Foci’ were defined as patches of darkly stained, newly-divided cells that had not yet begun to protrude from the surface of the root (Fig. 2B, C ). ‘Domes’ were defined as primordia that had begun to bulge from the root surface, but had not yet assumed a spherical shape (Fig. 2D, E). ‘Nodules’ were defined as Fig. 1. Methylene blue-stained root hairs. Soybean roots were harvested 2 d after inoculation with various strains of B. japonicum and stained with methylene blue as described in Materials and methods. Roots were inoculated with USDA110 (A), LSG184 (B), nodA2 (C ) or left uninoculated (D). Clusters of curled root hairs (black arrows) and emerging lateral roots (white arrows) are indicated. Scale bars=100 mm. 1580 Green and Emerich roots could not readily be observed, no attempt was made to distinguish between true infections and pseudoinfections (Calvert et al., 1984). Time-course of nodule development after inoculation with wild-type and mutant B. japonicum Fig. 2. Haematoxylin-stained soybean root segments. Soybean roots were inoculated with USDA110 and stained with haematoxylin at various times after inoculation. Roots were harvested 2 d (B), 3 d (A, C ), 4 d (D), 6 d ( E ) or 8 d (F ) after inoculation. Haematoxylin-stained foci ( large white arrows) and an emerging lateral root (small white arrow) are indicated. Scale bars=1 mm (A) or 200 mm (B–F ). primordia that had become spherical and emerged more than half-way from the surface of the root ( Fig. 2F ). Because haematoxylin staining of whole roots does not reveal structural changes deep within the root cortex, the nodule primordia could not be staged as precisely as allowed by the serial sectioning technique. However, our foci category roughly coincides with stages I–V as defined by Calvert et al. (Calvert et al., 1984), and domes and nodules correspond approximately to developmental stages VI–IX and X–XX, respectively. As curled root hairs or infection threads on the haematoxylin-stained Soybean root segments inoculated with USDA110 showed a large number of haematoxylin-stained foci by 48 h after inoculation ( Fig. 4A). There were still a large number of foci evident at 3 d, but thereafter the numbers declined until only about a third of the peak number remained at 7 d after inoculation. From 7 to 14 d after inoculation there was little further decline in the number of foci. By 4 d after inoculation a small proportion (approximately 10%) of the foci had enlarged enough to swell above the surface of the root and be scored as domes (Fig. 4B). By 9 d after inoculation the total number of domes declined, as most of the domes continued to develop into nodules. The first nodules were observed at 5 d after inoculation ( Fig. 4C ), increasing in number over the next few days to an average of about five nodules per segment. Similar to observations with USDA110, root segments inoculated with LSG184 also showed large numbers of haematoxylin-stained foci. The number of foci reached its peak by 2 d after inoculation, then declined sharply between days 5 and 7 to about 50% the peak value ( Fig. 4A). Although the peak number of foci formed by the mutant was only 60–65% of the wild-type peak, the time-course of appearance and subsequent regression of the foci showed no delay relative to the wild type. In general, the foci formed by LSG184 appeared to be somewhat smaller and more faintly stained than those formed by the wild type. As with the wild-type inoculations, a small proportion (about 10%) of the foci induced by LSG184 developed further into domes and nodules. The first domes were evident within 4 d, but the first nodules did not appear until 9 d after inoculation ( Fig. 4B, C ). Thus the delay in nodulation observed with LSG184 became most evident after 4–5 d of symbiotic development. The number of days between the appearance of the first foci to the appearance of the first domes was 2 d for both USDA110 and LSG184 inoculations. In contrast, the time between the appearance of the first domes and the appearance of the first nodules was only 1 d for USDA110, but 5 d for LSG184. Reduced number of foci does not necessarily cause a delay in nodulation The number of foci induced by LSG184 was significantly lower than was observed after inoculation with the wild type. To determine whether a reduced number of foci could cause delayed nodulation, foci and nodule development were monitored after inoculating soybean seedlings Delayed nodulation mutant 1581 Fig. 3. Haematoxylin-stained cell division foci. Soybean roots were harvested 2 d (B) or 6 d (A, C ) after inoculation with USDA110 and stained with haematoxylin. Vibratome sections were prepared from the stained roots and viewed under dark field (B) or Nomarski (A, C ) optics. Scale bars=50 mm (A, B) or 100 mm (C ). with reduced concentrations of USDA110. Reducing the inoculum density from 108 to 105 cells ml−1 dramatically reduced the number of foci observed at 3 d after inoculation ( Table 1). Nevertheless, roots inoculated at the lower density had still developed nodules by 5 d. Even roots inoculated at 102 cells ml−1, which had no haematoxylinstained foci at 3 d, showed occasional nodules at 5 d. Therefore a reduced number of foci does not necessarily lead to a delay in nodulation. Distribution of foci and nodules along the root The foci induced by USDA110 and LSG184 were not evenly distributed along the root segments, but were concentrated in the region at or above the root tip at the time of inoculation (Fig. 5). There was also about a 1 d delay, relative to the top part of the root (section 1), in the appearance of foci in the youngest region of the standard root segment (section 4), corresponding, on average, to the position of the root tip 1 d after inoculation. This delay was somewhat more pronounced in root segments inoculated with LSG184. By 7 d, after the majority of the foci had regressed, the remaining foci were evenly distributed along the root segments. Although more foci initially formed in the upper region of the root segments, nodules (scored at 14 d) were evenly distributed ( Fig. 6). The ability to induce foci correlates with the ability to produce Nod factors The induction of foci by several strains of B. japonicum and Sinorhizobium fredii that vary in their ability to nodulate the cultivar of soybean used in this study ( Williams 82) was monitored next. The nodA2 mutant of B. japonicum fails to produce any Nod factors and has a Nod− phenotype on soybean (Lamb and Hennecke, 1986). No haematoxylin-stained foci were ever observed after inoculation with this strain. Two strains of S. fredii were compared next: USDA191, which produces Nod factors and nodulates Williams 82, and USDA257, which produces the appropriate Nod factors, but has other genetic determinants that prevent it from nodulating improved cultivars of soybean (Heron et al., 1989; Becferte et al., 1994). As expected, USDA191 was able to induce haematoxylin-stained foci on Williams 82 (an average of 17.9±3.4 per root segment at 3 d after inoculation, on eight roots). USDA257, despite its inability to 1582 Green and Emerich Fig. 4. Time-course of nodule development after inoculation with USDA110 and LSG184. Soybean roots were inoculated with USDA110 or LSG184, harvested at various time intervals, stained with haematoxylin, and scored for the presence of foci (A), domes (B) and nodules (C ). Each point represents the average from 7–8 roots from a single experiment, except for those for days 3 and 6 which represent the mean±SE of two experiments containing eight roots each. Abbreviation: DAI, days after inoculation. nodulate Williams 82, also induced a similar number of foci (an average of 13.0±1.7 per root segment at 3 d after inoculation, on eight roots). Neither S. fredii strain induced as many foci as USDA110 or LSG184 ( Table 1). Taken together, these results indicate that the induction of foci was correlated with the ability of the inoculant to produce Nod factors rather than with its nodulation phenotype. Fig. 5. Spatial distribution of foci. Data from the same root segments used for Fig. 4 were analysed to show the spatial distribution of foci after inoculation with USDA110 (#) or LSG184 ($). Each 3 cm root segment was divided into four 0.75 cm sections, each of which was scored separately, from section 1 at the top (oldest) to section 4 at the bottom (youngest) of the root segment. Abbreviation: DAI, days after inoculation. Discussion Haematoxylin staining has been used as a simple and convenient method to localize new cortical cell divisions in soybean roots after inoculation with B. japonicum and S. fredii. The response is specific to rhizobial strains producing Nod factors and is never seen on uninoculated roots. Using this method it was possible to score new Table 1. The effect of inoculum density on the formation of nodule primordia Soybean roots were inoculated with USDA110 or LSG184 at the indicated cell density, harvested after 3 d or 5 d, stained with haematoxylin, and scored for the presence of foci, domes, and nodules. Values represent the mean±SE for each sample, with the sample size given in parentheses. Strain Experiment 1 Experiment 2 USDA110 LSG184 USDA110 USDA110 USDA110 Inoculum density (cells ml−1) 3d 5d Foci No. per root Foci+domes No. per root Nodules No. per root 108 108 108 105 102 57.6±5.1 (16) 33.7±4.5 (16) 45.4±13.0 (5) 5.6±2.0 (5) 0 (5) 39.7±5.2 (8) 33.8±3.5 (8) 48.7±5.2 (3) 11.8±3.9 (5) 0.8±0.5 (4) 2.5±1.6 0 (8) 8.3±0.3 3.8±1.0 0.2±0.2 (8) (3) (5) (4) Delayed nodulation mutant 1583 Fig. 6. Spatial distribution of foci versus nodules. Data from the same experiments presented in Fig. 4, analysed to show the spatial distribution of foci on day 3 as compared to nodules on day 14 (±SD), after inoculation with USDA110 or LSG184. mitotic activity on much larger sample sizes than is practical using serial sectioning methods (Mathews et al., 1989; Takats, 1990; Gerahty et al., 1992). For example, 20 root segments were routinely scored in under 2 h, allowing the analysis of more than 250 root segments for this study. Large sample sizes are important in quantifying cell division foci in soybean, to compensate for the high variability between roots (Mathews et al., 1989; Gerahty et al., 1992). Nodule primordia in soybean have also been stained with nile blue (O’Hara et al., 1988), but to our knowledge not within the first few days after inoculation. Methylene blue stains very young primordia on Glycine soja, but not on the larger roots of Glycine max ( Eskew et al., 1993; Stokkermans and Peters, 1994; our own observations). Fluorescence of novel flavonoids has also recently been proposed as a convenient developmental marker for very young nodule primordia in several legumes, but excessive background autofluorescence obscures the signal in soybean (Mathesius et al., 1998). In contrast, soybean cell division foci as early as 3 d after inoculation have been localized with eriochrome black (Hacin et al., 1997) and this technique may be a suitable alternative to haematoxylin. Soybean is particularly amenable to the haematoxylin staining method because, unlike legumes forming indeterminate nodules, the new cortical cell divisions induced by inoculation take place close to the surface of the root. Nevertheless, the haematoxylin staining method should also work well for any other legumes, such as Lotus and Phaseolus species, that initiate nodule primordia in a manner similar to soybean. The total number of haematoxylin-stained foci that formed after inoculation of soybean was dependent on both the rhizobial strain used and the inoculum density ( Table 1). Since the formation of foci on soybean is a Nod factor-dependent response (this study; Stokkermanns and Peters, 1994), the total number formed may be determined by the overall concentration of Nod factors in contact with the root, which in turn would be affected by both inoculum strain and density. The foci induced after inoculation with B. japonicum were also unevenly distributed along the 3 cm root segments analysed in this study, with many more forming at or above the position of the root tip at the time of inoculation. The uneven distribution may be a consequence of the inoculation method, in that the top part of the root segment, containing the tissue most susceptible to infection at the time of inoculation (Bhuvaneswari et al., 1980), was exposed directly to the inoculum. In contrast, the bottom part of the segment, not formed until 1 d after inoculation, may have come into contact with fewer bacteria. Despite the uneven distribution of foci, mature nodules were evenly distributed along the root segments, confirming that the number of nodules eventually formed is regulated independently of the number of foci present early in the symbiosis. Most of the foci present on day 3 after inoculation regressed rather than developing further into domes and nodules. This result confirms the findings of several earlier studies using the serial-sectioning technique (Calvert et al, 1984; Mathews et al., 1989; Gerahty et al., 1992), that inoculation of soybean induces many more foci than ever develop into nodules. The transiently stained foci probably correspond to what has been termed psuedoinfections (Calvert et al., 1984), so called because they were not closely associated with curled root hairs or infection threads and were blocked prior to the formation of a nodule meristem. Although the majority of the haematoxylin-stained foci apparently regressed within 7 d, a small but stable number remained even after 14 d. These foci may represent a reservoir of primordia that can be used by the plant to make additional nodules should the need arise. The existence of such reserve primordia was suggested by Caetano-Anollés et al., who showed that when soybean roots were stripped of their nodules, new nodules developed from primordia that had been formed 1584 Green and Emerich at the time of initial inoculation and not from new infections (Caetano-Anollés et al., 1991). Roots inoculated with the tricarboxylic acid cycle mutant LSG184 showed no delay relative to the wild type in the formation of curled root hairs or the induction of new cortical cell divisions. Since these responses are both Nod factor-dependent (this study; Stokkermans and Peters, 1994; Minami et al., 1996), these results imply that LSG184 is not grossly deficient in Nod factor production. The earliest stage at which the mutant showed a pronounced delay relative to the wild type was in the development of domes (stages VI–IX ) into nodules (stages X and beyond). This transition began within 5 d after inoculation with the wild type, but took an additional 4–5 d after inoculation with the mutant. This delay shows that nodule development beyond stages VI–IX is dependent in part on the phenotype of the invading bacterium. This phase of soybean nodule development is normally when infection threads are progressing toward the newly formed nodule primordia ( Turgeon and Bauer, 1982). Based on these observations, it is proposed that LSG184 may have a defect in infection thread initiation or growth and that normal development of soybean nodules past stage VI may depend in part on the proximity of an infection thread. Beyond its delayed nodulation phenotype, LSG184 shows an additional delay in later symbiotic events. Although there was just a 5 d delay in nodule emergence there was a 12–14 d delay in release of bacteria into the nodule cells and the subsequent onset of nitrogen fixation (Green and Emerich, 1997b). However, once the bacteria were released into the host cells, symbiotic development proceeded normally. This observation lends further support to the notion that the symbiotic defect of LSG184 manifests itself mainly in the initiation or growth of infection threads. An alternative explanation for the delayed nodulation phenotype of LSG184 is that the mutant, although producing enough Nod factor to initiate the early steps of symbiosis is, nevertheless, deficient in Nod factor production at later stages. The development of soybean nodule primordia beyond the initial stages probably depends on continuous exposure to Nod factor from the invading bacteria. A latent deficiency in Nod factor production by LSG184, sufficient to cause delayed nodulation, could become manifest if: (1) the mutant produces less Nod factor once inside the host; (2) the mutant continues to produce Nod factor at the same rate on an individual cell basis, but there is a delay, because of growth defects (see below), in the accumulation of a sufficient number of mutant bacteria near the developing nodule primordia; or (3) a higher threshold concentration of Nod factor is required for advanced nodule development than for root hair curling or stimulation of cortical cell divisions. The basis of LSG184’s defect may relate to its altered use of carbon sources. Because LSG184 grows more slowly than the wild type on some substrates in culture (Green and Emerich, 1997a), it may proliferate poorly on the root surface or inside infection threads. The nutrients used by rhizobia during invasion of the host plant are not yet known. However, evidence derived from studies of mutants with defects in hexose or dicarboxylate utilization imply that multiple carbon substrates are available within the infection thread (McDermott et al., 1989; O’Brian and Maier, 1989). LSG184 grows poorly on glutamate, pyruvate, or acetate as a carbon source and is also inhibited by the latter compound even in the presence of more favourable carbon substrates. If acetate accumulated within the infection thread, growth of the mutant could be impaired. LSG184 also grows poorly on glutamate as a nitrogen source and infection thread function could be impaired if this amino acid is an important source of nitrogen during invasion of the host. Alternatively, LSG184’s lesion in central carbon metabolism could have downstream effects on EPS or LPS quantity or structure, and thus influence symbiotic development. The delay in nodule development seen after inoculation with LSG184 is later than the stages usually implicated in the autoregulatory response of soybean, the mechanism by which the host plant controls the number of primordia allowed to develop into nodules (Calvert et al., 1984; Mathews et al., 1989; Gerahty et al., 1992). Studies of supernodulating mutants of soybean, in which autoregulation is defective, suggest that the most advanced nodule primordia induce the formation of a shoot-derived signal that inhibits the development of further nodules (Gresshoff, 1993; Sheng and Harper, 1997). In preliminary experiments, the supernodulating mutants nts382 and nts1007 showed both supernodulation and delayed emergence of nodules when inoculated with LSG184 (data not shown). Thus the delay in nodule development conditioned by LSG184 does not interfere with expression of the supernodulating phenotype, but is sufficient to counteract the postulated accelerated growth of primordia on supernodulating soybean (Gresshoff, 1993). Further study of the nodulation kinetics of specific strain/cultivar combinations, facilitated by the haematoxylin-staining technique, should shed more light on the regulation of soybean nodule development. Acknowledgements We are grateful to Tobias I Baskin and the members of his laboratory for allowing us free use of their microscopes and for generous assistance with optimizing our methods. We also thank Bruce McClure for the use of his dissecting microscope during the early stages of the project. 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