15th International Conference on Experimental Mechanics PAPER REF: 2693 PULSATILE BLOOD FLOW IN HUMAN CAROTID BIFURCATION Luísa C. Sousa *1,2, Catarina F. Castro1,2, Carlos C. António1,2, Rui Chaves2, Rosa Santos3,4, Pedro Castro3,4 and Elsa Azevedo3,4 1 Department of Mechanical Engineering, FEUP, University of Porto, Porto, Portugal 2 Institute of Mechanical Engineering (IDMEC), University of Porto, Porto, Portugal 3 Hospital São João, Porto, Portugal 4 Faculty of Medicine (FMUP), University of Porto, Porto, Portugal (*) Email: [email protected] ABSTRACT The purpose of this paper is to present a numerical simulation system for blood flow in the carotid artery bifurcation and its validation using experimental data collected in clinical practice. Blood flow is described by the incompressible Navier-Stokes equations and the simulation is carried out under pulsatile conditions using inlet velocities given by a flow wave form obtained by ultrasound measurements. Keywords: carotid artery bifurcation, computational fluid dynamics, finite element method, image-based analysis INTRODUCTION The accumulation of plaques on an artery wall is a progressive disease facilitated by local irregular flow fields. Although clinical symptoms of this disease become evident when the stenosis percentage is around 70%, modifications of the flow characteristics such as separation and flow-reversal zones, occur at milder degrees of stenosis. It is well established that once a mild stenosis is formed in the artery, altered blood flow and stress distribution in the arterial wall contribute to further progression of the disease. Recent non-invasive medical imaging data acquisition made feasible to construct three dimensional models of blood vessels (Schumann et al., 2008). Colour Doppler ultrasound is inexpensive, widely accessible, fast and safe, and provides real-time images of endovascular structure; also measuring techniques have improved to provide accurate information on the flow fields. Validated computational fluid dynamics models using data obtained by these currently available measurement techniques can be very valuable in the early detection of vessels at risk and prediction of future disease progression. The objective of this paper is to present a three dimensional numerical simulation system for the study of arterial blood flow under pulsatile conditions by the Finite Element Method (FEM) (Sousa et al., 2011) and compare numerical results with experimental ones obtained from Doppler ultrasound blood flow measurements in patients. The developed software is applied to the study of a carotid arterial bifurcation. CAROTID ARTERY BIFURCATION DATA Extra-cranial carotid arteries of symptomatic patients were scanned by medical experts using a digital ultrasound acquisition system, consisting of a standard commercial ultrasound scanner (General Electric vivid e). Then, a developed semi-automatic procedure determines ICEM15 1 Porto/Portugal, 22-27 July 2012 the 3D geometry of the carotid arterial bifurcation to be reconstructed from 2D longitudinal images and complemented by a serial of 2D transverse images. Since vessel geometry determines important features of the flow it is important to accomplish the ability to achieve anatomically correct geometries. The arterial geometry was based on in vivo image data with minimum volume at diastolic pressure according to the approved protocol. Details of the 3D geometry reconstruction procedures have been reported elsewhere (Chaves et al., 2012). In summary, three main steps were involved in developing the carotid bifurcation artery model: acquiring the in vivo anatomical data via ultrasound imaging, image surface reconstruction and 3D Finite element mesh definition. According to the protocol, flow velocity was measured at different central locations in the common carotid and also at internal and external carotid arteries. Ideally instead of centreline velocity, velocity profiles should be acquired and used as boundary conditions for the flow simulations. However, in clinical studies, the prolonged scan time of MR velocity measurement could be rather prohibitive whereas the well subject tolerated and easy access of Doppler ultrasound render it a more practical choice. NUMERICAL SIMULATION MODEL Navier-Stokes equations describe the mechanics of fluid flow. They state the dynamical balance between the internal forces due to pressure and viscosity of the fluid and the externally applied forces. Considering isothermal conditions the time dependent incompressible blood flow is governed by the momentum and mass conservation equations, the Navier-Stokes equations given as: ∂u + u.∇u = ∇σ + f ∂t ∇.u = 0 ρ (1) where u and σ are the velocity and the stress fields, ρ the blood density and f the volume force per unit mass of fluid. The equation system Eq. (1) can be solved for the velocity and the pressure given appropriate boundary and initial conditions. In this study the biochemical and mechanical interactions between blood and vascular tissue are neglected. In an elderly person the walls of the arteries thicken, loose their elasticity, become stiffer and the effects of wall compliance can be neglected. Then no slip at the interface with the rigid vessel wall can be assumed. At the flow entrance Dirichelet boundary conditions are considered prescribing a parabolic distribution for the time dependent value u D of the velocity on the portion ΓD of the boundary u ( x, t ) = u D ( x, t ) , x ∈ ΓD . At an outflow boundary ΓN the condition describing surface traction force h is assumed. This can be described mathematically by the condition: −δ + + = ℎ , = 1,2,3onΓ (2) where n j are the components of the outward pointing unit vector at the outflow boundary. 2 Editors: J.F. Silva Gomes and Mário A.P. Vaz 15th International Conference on Experimental Mechanics FINITE ELEMENT METHOD (FEM) A finite element approach for the solution of the time-dependent incompressible NavierStokes equations is presented. For a 3D analysis hexahedral meshes often provide the best quality solution minimizing errors due to numerical diffusion whenever a good alignment between mesh edges and flow exists (De Santis et al., 2010). In this work a spatial discretization with isoparametric brick elements of low order with trilinear approximation for the velocity components and element constant pressure is adopted. The numerical procedure for the discretization in space uses the Galerkin-finite element interpolation. The discretization in time is obtained by an implicit fractional step-method in which the time advancement is decomposed into a sequence of two steps (Blasco et al., 1998; Quarteroni et al., 2003): • Calculation of an auxiliary velocity field un +1 / 2 from the equations of motion, which include the viscous and convective effects; known pressure values from the previous time step n or previous iteration step m are used; • Calculation of the end-of-step velocity field un +1 and pressure p n +1 by the solution of the Stokes problem using lumped mass matrix. The method includes a diffusion term in the incompressibility step, which allows the imposition of the full boundary conditions for the velocity while needing no pressure boundary conditions (Blasco et al., 1998). Due to high Reynolds numbers, the treatment of the convective term needs a numerical scheme with a stabilization technique like the Streamline upwind/Petrov Galerkin method, (SUPG-method) in order to avoid oscillations in the numerical solution (Hughes et al., 1986; Hughes et al., 1989). The SUPG-method produces a substantial increase in accuracy as stabilizing artificial diffusivity is added only in the direction of the streamlines and crosswind diffusion effects are avoided. RESULTS Doppler ultrasound measurements of the left carotid arteries of one particular patient were obtained at the hospital practice. The medical doctor was able to make a rough outline of the intima-media region boundaries in the B-mode image shown in Fig. 1. The reconstructed geometry and meshing of the carotid bifurcation based on in vivo image data with minimum volume at diastolic pressure according to the approved protocol is shown in Fig. 1. The flow wave form for one cardiac cycle has been calculated from ultrasound measurements at the distal common carotid artery section (DCCA), at 1.5 cm before bifurcation. Numerical simulation is performed considering pulsatile blood flow with time dependent parabolic inlet velocity given by this wave form. ICEM15 3 Porto/Portugal, 22-27 July 2012 Fig.1 Doppler image and finite element mesh of the carotid bifurcation Convergence has been carefully tested. Refinement of both temporal and spatial resolutions was performed until changes in predicted velocities and wall shear stress became negligible. A mesh of 40 thousand tetrahedrons with trilinear approximation for the velocity components and element constant pressure is adopted. Velocity results are presented and compared with experimental data flow wave forms at three locations. In Figs. 2-4, the measured and calculated flow wave forms, during one cardiac cycle are shown at the common carotid artery (APPEX), PICA and PECA. APEX represents the bifurcation entrance; the proximal external carotid artery (PECA) corresponds to the most proximal point at the external carotid artery without flow disturbance from bifurcation (1.68 cm from DCCA); PICA, the proximal internal carotid artery is situated 1.65 cm after DCCA, at the internal carotid artery. 60 v (cm/s) 40 20 0 0,0 0,3 0,5 t/tp 0,8 1,0 Fig.2 Obtained flow wave form and measured diastolic velocity at the APPEX 60 v (cm/s) 40 20 0 0,0 0,3 0,5 t/tp 0,8 1,0 Fig.3 Obtained flow wave form and measured diastolic velocity at PICA 4 Editors: J.F. Silva Gomes and Mário A.P. Vaz 15th International Conference on Experimental Mechanics This study shows the accuracy and efficiency of the carotid bifurcation blood flow simulation method. At all three positions in the carotid bifurcation there is a good agreement in shape between the obtained flow wave forms and those obtained experimentally by Doppler ultrasound measurements in clinical practice. At all three positions the direct influence of the inflow pulse, which reflects the mechanical heart action, is largely preserved. 60 v (cm/s) 40 20 0 0,0 0,3 0,5 t/tp 0,8 1,0 Fig.4 Obtained flow wave form and measured diastolic velocity at PECA Fig.5 Velocity field in the symmetric plane of the carotid bifurcation t = 0.37s Velocity field in the symmetric plane of the carotid bifurcation is shown in Fig. 5 for the cardiac cycle instant t = 0.37. It can be observed a strongly skewed axial velocity in the carotid sinus with high velocity gradients at the internal divider wall. Near the outer sinus wall (the wall opposite the divider wall) stagnation corresponding to a recirculation region is detected by the developed code. At the external carotid high velocity gradients are also detected, due to the narrow section. CONCLUSIONS A computational finite element model for simulating blood flow in arteries is presented. Blood flow is described by the incompressible Navier-Stokes equations and the simulation is carried out under steady and pulsatile conditions. The accuracy and efficiency of the blood ICEM15 5 Porto/Portugal, 22-27 July 2012 simulation is validated comparing with experimental data obtained by in vivo measurements. Velocity fields and flow wave forms are in good agreement with those obtained by ultrasound measurements. The presented research is helpful for preventing cerebral vascular accidents once the developed code is able to identify stagnation and reversal flow regions in vessels with complex geometry like in stenosed arteries or carotid bifurcation. ACKNOWLEDGMENTS This work was partially done in the scope of project PTDC/SAUBEB/102547/2008, “Blood flow simulation in arterial networks towards application at hospital”, financially supported by FCT – Fundação para a Ciência e a Tecnologia from Portugal. REFERENCES Blasco J, Codina R, Huerta A. A fractional-step method for the incompressible Navier–Stokes equations related to a predictor–multicorrector algorithm. Int. J. Numer. Meth. Fluids, 1998, 28, p. 1391-1419. Chaves R, Sousa L, Castro C, Antonio C, Santos R, Castro P, Azevedo E. Structured mesh generation from Doppler ultrasound images, submitted to 15th International Conference on Experimental Mechanics, ICEM15, July 2012. 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Schumann C, Neugebauer M, Bade R, Preim B, Peitgen HO. Implicit vessel surface reconstruction for visualization and CFD simulation, Int. J. Computer Assisted Radiology and Surgery, 2008, 2, p. 275-286. Sousa L, Castro C, Antonio C, Chaves R. Computational Techniques and Validation of Blood Flow Simulation, WSEAS Transactions on biology and biomedicine, Included in ISI/SCI Web of Science and Web of Knowledge, 2011, 4-8, p. 145-155. 6 Editors: J.F. Silva Gomes and Mário A.P. Vaz
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