J . Cell Sci. 12,809-830 (1973) Printed in Great Britain H U M A N CHROMOSOMES I N 18 MAN-MOUSE SOMATIC H Y B R I D CELL L I N E S A N A L Y S E D BY QUINACRINE FLUORESCENCE P. W. A L L D E R D I C E , 0. J. M I L L E R Department of Human Genetics and Development, and Department of Obstetrics and Gynecology,College of Physicians and Surgeons, Colt~mbiaUniversity, New Yoriz roogz, U.S.A. P. L. P E A R S O N * M.R.C. Clinical Population Genetics Unit, Headington, Oxford, England G. K L E I N Department of Tumor Biology, Karolinska Institutet, S-104 01 Stockholm 60, Szveden H. H A R R I S Sir William Dunn School of Pathology, University of Oxford, Oxford England AND 0x13RE, SUMMARY Chromosome studies were done on 18 somatic hybrid cell lines produced by fusing cells of the mouse A 9 line with cells of the human Daudi lymphoblastoid line derived from a patient with Burkitt's lymphoma. The human chromosomes were identified by their quinacrine fluorescent banding patterns. In one hybrid line the human chromosomes were identified also by the centromeric heterochromatin staining technique. Every human chromosome was identified in one or more of the hybrid lines. Some lines were homogeneous in terms of their human chromosome content, while others were quite heterogeneous. Detailed analysis of the A 9 chromosomes in one hybrid line showed very few changes in comparison with the chromosome constitution of the average A g cell. INTRODUCTION Human chromosomes tend to be eliminated from man-mouse somatic cell hybrids (Weiss & Green, 1967). Retention of a specific human chromosome can be achieved by the use of a selective growth medium which requires the retention of a chromosome bearing a gene that specifies an enzyme essential for growth. By this technique the human thymidine kinase gene locus, earlier shown to be on a human E-group chromosome (Matsuya, Green & Basilico, 1968; Migeon & Miller, 1968), was assigned to chromosome 17 (Miller et al. 1971), the human isocitrate dehydrogenase locus to chromosome 20 (Boone, Chen & Ruddle, 1972), the human lactate dehydrogenase-A locus to chromosome 11 (Boone et al. 1972) and, by the use of cells bearing an Xautosome translocation, the human phosphoglycerate kinase locus to the long arm of the X chromosome (Grzeschik et al. 1972). * Present address: Department of Genetics, University of Leiden, Leiden, T h e Netherlands. 52 G E L 12 810 P. W. Allderdice and others In most of the earlier studies it was not possible to identify precisely the other human chromosomes retained in the hybrid cells. However, estimates of their number were made, based on the increase in the frequency of biarmed (Migeon & Miller, 1968) or acrocentric chromosomes (Kusano, Long & Green, 1971). With the quinacrine fluorescence technique, exact identification of each normal human chromosome is possible (Caspersson, Lomakka & Zech, 19716), and the identification of several human chromosomes in hybrid cells has been reported (Caspersson et al. 1971a; Boone et al. 1972). We have applied this technique to a series of man-mouse hybrid cells lines and can now report that each of the 24 different human chromosomes is sometimes retained. We also present a method for evaluating the heterogeneity (or instability) of such hybrids with respect to their content of chromosomes of each parental type. MATERIALS AND METHODS The two cell lines used in the production of hybrids were the near-diploid human line, Daudi, and the heteroploid mouse line, A 9. Daudi is a lymphoblastoid line derived from a patient with Burkitt's lymphoma. It grows as a suspension culture and shows surface IgM (Klein et al. 1967). The A 9 line, which is deficient in the enzyme inosinic acid pyrophosphorylase (EC 2.4.2.8), was derived from mouse L cells (Littlefield, 1964). Its quinacrine fluorescence karyotype has been studied in some detail (Allderdice et al. 1973). The Daudi and A 9 cells were fused by the u.v.-inactivated Sendai virus technique (Harris & Watkins, 1965) late in 1970 and early in 1971. The mixture of fused and unfused cells was grown in H A T medium, thus providing a double selection system: Daudi cells do not attach to glass, and A 9 cells, lacking inosinic acid pyrophosphorylase, do not grow in H A T medium. Thus only A 9/Daudi hybrid cells grew on the surface of the culture vessels. Within 2-3 weeks isolated hybrid colonies appeared in the cultures, and we shall refer to their descendants as clonal lines. The isolation of hybrid lines in H A T medium was made by one or two methods. Primary clonal lines P1C1, P1C2, P1C3, Cl 3, Cl 5, Cl 6, Cl 7, Cl 9 and Cl 10 were each derived from a separate fusion event: individual primary hybrid colonies were isolated and trypsinized in steel cylinders. Line Pi was a wild type culture derived from the flask from which clonal lines P I C I , P1C2 and P1C3 had been isolated earlier. Lines Or, P i , P2, P3, P4, PA3, PA4, PA5 and PA6 were wild type lines each derived independently from a single flask containing the original population of fused cells. Each line was continuously grown in H A T medium except the Or line, which was transferred to Eagle's MEM after its initial selection in HAT. Metaphase chromosome preparations were made of the Daudi cells in June 1971 and of the A 9 cells (grown continuously in mass culture in H.H.'s laboratory since 1967) in July and August 1971. Samples of the hybrid cell lines were harvested for chromosome study at the same time. Mitotic cells were collected by shaking growing cultures and removing the detached cells; these were suspended for 3 min in 10 ml of medium containing 1 drop of 0-04 % colcemid, transferred to hypotonic KCl solution (007 M) and then fixed in several changes of acetic acidmethanol (1:3). Small drops of the cell suspension were placed on coverslips (thinness no. 1) and air-dried. For fluorescent banding studies, these preparations were stained with a 5 mg/ml solution of quinacrine dihydrochloride in ethanol, washed and mounted in distilled water. Fluorescence microscopy was done by means of a Leitz Ortholux microscope with an HBO 200-W mercury lamp, epi-illumination, BG 12 or Schott 436 excitor filter, 490-nm barrier filter, and a x 90 oil-immersion objective with a funnel stop. Photographs were taken on Kodak Panatomic X film with exposures of 25-40 s, developed in Kodak Microdol X and printed on Ilford paper contrast grade 4. In one case, centromeric heterochromatin was stained by the method of Dev, Miller, Allderdice & Miller (1972). This involved treating the preparations with 95 % formamide in SSC (0-15 M sodium chloride plus 0-015 M trisodium citrate) at 65 °C for 20 min and then staining the cells with Giemsa for 30 min. Chromosomes in man-mouse hybrid cells 811 RESULTS Parental lines These have been described elsewhere, but the most significant karyotypic features are described here because of their relevance to the observations made on the hybrid cells. The A 9 cells contained only 16 of the 21 normal mouse chromosomes (Committee, 1972;. Of the other 5, the Y chromosome was never seen, while chromosomes 15, 16 and 17, and the X were present in various centric fusion translocation chromosomes. A detailed analysis of the karyotypes of 11 of these A 9 cells has been reported (Allderdice et al. 1973). The median number of chromosomes per cell was 59 (range 55-63), with up to 45 morphologically distinctive chromosomes per cell. A total of 58 different chromosomes was seen in the eleven A 9 cells, i.e. 16 normal mouse chromosomes plus 42 identifiable marker chromosomes. The Daudi cell line appeared to be slightly heterogeneous, as noted already by Manolov, Manolova, Levan & Klein (1971). Of the 10 cells karyotyped, 5 showed a normal human diploid male karyotype (46, XY), 4 were trisomic for chromosome 7 (47, XY, +7) and 1 was monosomic for chromosome 14 (45, XY, — 14). In 1 of the trisomic cells there was a constriction near the end of the long arm of a chromosome 11. Several chromosomes had polymorphic characteristics which could be used to aid identification in hybrid cells. Both chromosomes 3 had an intensely fluorescent band adjacent to the centromere. One chromosome 13 had an intensely fluorescent satellite, while the other had intense fluorescence of the short arm. The satellite of each chromosome 22 was more brightly fluorescent than the long arm of the chromosome. Hybrid cell lines In one hybrid line, Cl 7, metaphase spreads were examined first by the quinacrine fluorescence technique (Fig. 7) and then by a centromeric heterochromatin staining (C-banding) method (Fig. 8). All the chromosomes identified as mouse on the basis of their fluorescent banding patterns, except mouse chromosome 14 and its derivative, the A 9 marker M 5, had large blocks of centromeric heterochromatin, as expected in the mouse. The chromosomes identified as human on the basis of their fluorescent banding patterns had much smaller heterochromatic blocks, as expected of human chromosomes. In addition, in each hybrid cell the size of human chromosomes relative to mouse marker chromosomes could be used for purposes of identification, particularly for checking the identity of the shorter human chromosomes (Fig. 9). No exceptional chromosomes, of the type one might see following an interspecific translocation, were seen. Since the accuracy of the identification of the species of origin of each chromosome by its fluorescent banding pattern was confirmed by the C-banding technique, we used only the fluorescent banding technique for analysing most of the hybrid lines. The results obtained from analysis of 20 cells of line Cl 6 are shown in Table 1. There were 1-7 different human chromosomes per cell. Chromosome 13 was present in every cell, usually in 2 copies, one with an intensely fluorescent satellite, the other 52-2 P. W. Allderdtce and others 8l2 Table i. Cell by cell analysis of human chromosomes in line 67 6 Number of copies of each chromosome poll no. 2 10 11 12 13 17 19 20 22 X Y 3P- I 2 3 4 5 6 7 8 9 10 11 12 13 '4 15 16 17 18 '9 20 with an intensely fluorescent short arm (Fig. 10), like the 2 chromosomes 13 in the Daudi parent. The X chromosome, which was selectively retained, was present in 14 of the 20 cells. The cell line as a whole contained considerably more kinds of human chromosomes than any single cell. Eleven different human chromosomes, plus 1 marker of presumptive human origin, were present in at least 1 of the 20 cells, although only 3 were seen in a majority of the cells. As Table 1 indicates, there was considerable variation from cell to cell in the content of human chromosomes, and one might ask whether all 24 human chromosomes would be found in this hybrid cell line if enough cells were analysed. In order to answer this question, and the more general one of how to characterize the degree of heterogeneity of any cell line, we have plotted the cumulative number of different human chromosomes against the number of cells examined (Fig. 1). A rough curve was produced by taking the 20 cells in the order shown in Table 1. The smooth curve was produced by considering the 20 cells in 20 different orders, and plotting the mean values. This minimized the variation from cell to cell and the effect of the 3 cells that contained one or two chromosomes not present in any of the other 19 cells. From the slope of the resultant smooth heterogeneity curve (o-2 in the region from 18 to 20 cells) it is clear that examination of additional cells would probably disclose the presence of additional human chromosomes, but no more than 1 for every 5 cells analysed. Thus, if 20 more cells had been examined, some, but probably not more than 4, additional human chromosomes might have been found, making a total of 16. Thus, it is unlikely that this line contains every human chromosome. Chromosomes in man-mouse hybrid cells 8"3 12 S „ 10 •8 I 8 u O c E U 10 Number of cells 15 20 Fig. i. Heterogeneity curve showing the cumulative number of different human chromosomes in Ao,/Daudi hybrid line Cl 6. +, the cells considered in the order shown in Table i; O, the cells considered in 20 different orders and mean values plotted. The hybrid lines are listed in Table 2 in decreasing order of the number of different human chromosomes they contain. This ranges from 21 in the Or line to zero in the C3P1 line. A total of 274 hybrid cells in the 18 different lines were examined for the presence of human chromosomes. The human chromosomes had banding patterns indistinguishable from those of the chromosomes in normal cultured leukocytes. This is illustrated by a composite karyotype (Fig. 11) in which human chromosomes from various hybrid cells are paired with a haploid set of human chromosomes from a cultured leukocyte. Every human chromosome was observed at least once. In addition to the normal chromosomes, several structurally abnormal marker chromosomes of probable human origin were seen (Fig. 12). In 9 lines there were marker chromosomes containing an area of brilliant fluorescence and other attributes of the banding pattern characteristic of human chromosome 3 (Table 2). In 1 line a marker chromosome had a segment of brilliant fluorescence similar to that of the Y chromosome of the Daudi line. Another marker appeared to have arisen from chromosome 5, with a segment of brighter fluorescence translocated to its distal end. Although every human chromosome, including the Y, was represented in these hybrid cells, chromosome 8 was identified in only one of the 274 cells. We feel that the less distinctive fluorescent banding pattern of chromosome 8 may have been responsible, at least in part, for the rarity of its identification, but preferential elimination of this chromosome cannot be ruled out. Curves showing the cumulative number of different human chromosomes for 5 of the hybrid lines are seen in Fig. 2. Of these, the Or line contains the most human chromosomes, 22. The curve for this line has flattened out after 20 cells, but not completely. Simple projection along the slope defined by the last 3 points suggests that one more human chromosome might be discovered in the line if another 20 or so cells were examined. This hybrid line may, in fact, contain every human chromosome. P. W. Allderdice and others Chromosomes in man-mouse hybrid cells 8i5 22 | 20 o §18 o "5 16 3 14 .C § 12 Z 10 E y 1._ + — ) . _ . | . _ 4 - . | + )._+ i i i 10 y—(-_ + _ +—y — + y—y i 15 20 N u m b e r of cells Fig. 2. Heterogeneity curves for human chromosomes in 5 other A<}/Daudi hybrid cell lines. The chromosome content of line P4 is in sharp contrast to that of line Cl 6 (Figs. 1, 10) or line Or. The curve is totally flat, reflecting the fact that 19 out of the 20 cells contained 1 of the 2 human chromosomes seen. It is unlikely that additional human chromosomes would be discovered, no matter how many additional cells were examined. Line PA3 had a similar flat curve, and contained a single chromosome 19 in 12 of the 14 cells examined. The behaviour of cell line P3 falls between that of the Or and the P4 lines. The total number of different human chromosomes seen in 20 cells was 14, and the slope of the curve at that point, about o-i, is such that one might expect to find about one additional human chromosome if 10 additional cells were examined. The hybrid line P2 has a more steeply rising curve (slope about 0-2 after 20 cells) than P3. The implication is that more human chromosomes have been missed in the sample of 20 cells examined. As in line Cl 6 (Fig. 1), we expect that up to one more human chromosome would be identified for every 5 cells analysed. Even more human chromosomes are probably present in the line Pi (Fig. 2); 13 different chromosomes were seen in the first 20 cells, and up to 3 more might be identified if 10 more cells were examined. Similar curves of the cumulative number of human chromosomes have been constructed for the remainder of the hybrid lines, and from these heterogeneity curves, an estimate has been obtained for the maximum number of different human chromosomes that would be detected in each line if 30 cells were examined. This is included P. W. Allderdice and others 8i6 « r 30 2 20 10 2 1 4 3 6 5 8 7 10 9 12 14 16 18 20 22 Y 11 13 15 17 19 21 X Chromosome Fig. 3. Frequency of each human chromosome in the pooled sample of 246 cells from 16 hybrid lines. Open areas, 1 copy; shaded areas, 2 copies. in the last column of Table 2, in which the percentage of cells containing each normal or marker human chromosome is given. The presence of more than one copy of a chromosome, being fairly uncommon, has been disregarded in constructing this table. The values obtained are usually only slightly higher than those observed with fewer cells, but line Cl 10 appears to be an exception. In 10 cells, 17 different chromosomes were observed, but only 4-11 in any one cell. If the next 20 cells were as variable as the first 10, then 31 different chromosomes would be expected, 7 more than possible, unless structural variants were involved; but none was seen in this line. In order to examine the possibility that differential elimination of specific human chromosomes may have occurred in Ao./Daudi hybrids, we pooled the data from the 16 lines that had been grown continuously in HAT medium and had retained one or more human chromosomes. Such pooling may not be valid, but appears reasonable when approximately equal numbers of cells from a large number of lines are used. Chromosomes in man-mouse hybrid cells 817 Table 3. Median number of chromosomes Mouse and human Mouse Human Total (including dote) Biarmed Acrocentric Biarmed Acrocentric Biarmed Acrocentric Line Ao Or 61 23 no 44 33 Cl 10 75 P3 CI9 74 73 P2 72 70 Cl7 Cl5 69 69 69 Pi CIPI C 2 Pl 68-69 66 C16 Cl3 P4 65 32 34 29 29 32 26 27 26 26 36 58 38 39 38 38 37 33 38 38 23 37 28 26 26 25-26 26 25 24-25 3° 24 23 23 40 36 56 37 34-35 35 35 35 33 38 38 39-4° 37 25-26 40 22 21 22 37 36 36 35 22 35 34-35 39 36-37 36 36 35-36 28 29 24 29 64-65 27 23 PA6 63 22 PA4 PA 3 23 C3P1 62 62 62 PA5 59 21 22 20 7 5 6 8 2 1 5 3 3 4-5 3-4 2 7-8 0 2 0-1 3 3 3-4 0 2-3 3 1 2 1 1 1 i 1 0 1 0 0 0 4 0 130 u 120 o 0 I 110 u JZ u v I 100 - A9 s Median E 'o o 90 7f] The 18 hybrid lines Fig. 4. Median number of A9 chromosome arms (excluding dots) in each hybrid and in a sample of A 9 cells. P . W. Allderdice and others 8i8 Table 4. Identification and number of copies of each human or mouse chromosome in hybrid line PA 6 Cell number Chromosome Type No. 1 2 3 4 5 6 7 8 9 10 11 12 13 1 1 1 1 1 1 1 14 HUMAN 2 10 21 1 1 1 1 1 1 1 2 2 2 2 1 2 2 1 2 2 2 3 2 2 2 1 1 1 1 1 1 1 2 1 1 1 1 1 1 5 1 1 1 1 1 1 1 1 1 1 2 6 4 3 3 2 2 2 7 8 2 1 2 1 2 3 3 MOUSE Normal j 4 9 or 13 1 1 1 2 3 2 1 1 1 1 3 3 3 3 4 3 2 2 2 2 1 1 2 1 2 2 1 2 2 2 1 2 1 2 1 3 3 3 3 3 3 2 3 3 3 3 3 3 4 4 4 4 4 4 4 2 2 2 1 2 5 3 1 1 1 1 1 2 10 2 11 12 2 2 3 2 2 2 2 1 14 19 1 1 1 1 1 1 1 1 Biarmed 1 17/1 18/1 X/3 5/3 15/3 5/4 1 1 1 1 I 15/4 n/5 15/5 18/5 15/10 16/10 17/10 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9 or 13/9 or 13 1 1 1 1 1 1 1 1 19/15 19/17 4/4 5/5 1 1 or 11 17/14 19/14 15/15 18/18 1 1 17/9 or 13 18/0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 2 2 1 2 1 1 1 1 1 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 Chromosomes in man-mouse hybrid cells 819 Table 4 (cont.) Chromosome No. Type Cell number 1 2 I I 2 I I I I 2 I 3 5 4 6 7 8 I I I 2 . I I I 2 I 9 11 10 12 13 H MOUSE (cont.) Telocentric markers Mi 12 — 12 + M2 M3 M4 M5 M6 M9 M12 M13 M14 MiS M16 Biarmed markers M41 M42 M43 M44 M45 M46 M50 M52 MI/MI I I I 2 I I I I 2 I I I I 2 I I I I 2 I I I I 2 I I I I 1 I I I I 1 I I I I 1 I I I I 1 I I I I 2 I 1 1 1 I . 1 I I I I I I I I . I I I The' results are shown graphically in Fig. 3. The frequency of occurrence of the human chromosomes in these 274 cells tends to have a bimodal distribution, with length as the major determinant of frequency. Most of the longer chromosomes (1-11) were seen in less than 14% of the cells, while most of the shorter chromosomes (12-22 + ) were seen in more than 20% of the cells. There were several exceptions, e.g. chromosome 3 was present in 25 % of the cells. We do not believe this is simply a reflexion of the easier identification of chromosome 3, with its centromeric zone of brilliant fluorescence, because chromosome 7, which also has a very distinctive banding pattern, was seen in only half as many cells. Of the shorter chromosomes, numbers 14 and :6 were seen less frequently than would be predicted on the basis of their length. In spite of these exceptions, length appears to be the major factor determining chromosome retention or elimination in Ao,/Daudi hybrids. Despite the fact that human X-linked inosinic acid pyrophosphorylase was essential for survival of these cell lines, a normal human X chromosome was observed in only 31% of these hybrid cells, and the presence of a translocated segment of the X chromosome was not evident in any of the other cells. In the Or line, which had been P. W. Allderdice and others 820 6 — 5 vt 0) Q. r 0 4 - n *o - 1 -L E 3 T 41 i i c 2 1 j L —J J. L._J 1 i L - n i _. 1 1 1 3 4 5 6 7 8 9 + 10 11 12 14 15 16 17 18 19 X Y 13 Chromosome number 1 2 3 4 5 6 7 8 9 10 11 12 13 40 41 42 43 44 45 46 Marker (M) number 3 o c £o Fig. 5. Comparison of the mean number of copies of each mouse chromosome found ) and PA 6 ( ) lines. in the A 9 ( maintained in a non-selective medium so that human inosinic acid pyrophosphorylase was no longer essential for its survival, a normal X chromosome was observed in only 20 % of the cells. The other chromosomes showed the same frequencies as those seen in the lines maintained in HAT medium, even though the Or line retained the largest number of human chromosomes (Fig. 2). It also contained the largest number of A9 chromosomes and chromosome arms, and may have originated from the fusion of two A9 cells with one Daudi cell. Although the mouse chromosomes of A9 origin were not individually identified in most of the hybrid lines, they were identified by exclusion and characterized as biarmed, telocentric, or dot. The median number of A9 and human chromosomes in each of the 18 hybrid lines is shown in Table 3. The mean number of mouse chromosomes in each cell line except the Or line was rather similar to the number in the A9 line. This is shown graphically in Fig. 4, in which the median number of chromosome arms (excluding dots) in the A9 line is compared with the corresponding number of chromosome arms of A9 origin in each of the hybrid lines. In 15 of the 18 lines, the median number of arms deviated by 5 or less from the value of 82 seen in A9. In the other 3 hybrid lines there were 7 to 51 more chromosome arms than in A9. The largest excess, 51, was observed in the Or line. This excess is so extreme that it must Chromosomes in man-mouse hybrid cells 0 821 2 4 6 8 10 12 No. of human chromosomes Fig. 6. The independence of the median total number of mouse chromosomes and the median total number of human chromosomes in the 18 hybrid lines. represent the fusion of two A9 cells or one polyploid A9 cell with one human cell. With this exception, the data fit well with the idea that fairly 'average' A9 cells enter into the formation of the hybrids and that A9 chromosomes do not tend to be lost from the hybrid cells. A more rigorous test of the idea that each hybrid contains an 'average' A9 chromosome set is possible if each mouse chromosome has been identified. The mouse chromosomes present in 14 cells of the PA 6 line (Table 4) have been compared with the 11 A9 cells studied previously (Allderdice et al. 1973). The mean number of copies per cell of each chromosome in the 2 lines is shown graphically in Fig. 5. Despite minor differences, the similarity of these two graphs is obvious. Since there is such a slight change in the average number of A9 chromosome arms in any of the hybrid cell lines, it might be possible to estimate the number of human chromosomes present in the A9/human hybrids from the total number of chromosomes in each hybrid line, as others have done. As seen in Fig. 6, this measure could be used, since the number of mouse chromosomes, like the number of mouse chromosome arms, is fairly constant. Nevertheless, the method is now unnecessarily crude, since more exact identification of the human chromosomes is possible with the banding technique. 822 P. W. Allderdice and others DISCUSSION Identification of human chromosomes The most striking finding in this study is that every human chromosome in the hybrid cells can be identified by its quinacrine fluorescent banding pattern against a heteroploid background of mouse chromosomes. The identification of the species of origin of each chromosome can be confirmed by the centromeric heterochromatin (C-banding) technique, as reported by Boone et al. (1972). In our experience, the combined use of both techniques has served to confirm the reliability of the fluorescent banding technique and to identify a translocation chromosome with a human centromere (Fig. 12). However, interspecific translocation chromosomes, whose occurrence has been suggested by Migeon & Miller (1968), might be more easily demonstrated by a combination of the 2 techniques than by either one alone (Boone et al. 1972), especially if both were applied to the same cells. An interesting finding in this study is that man-mouse hybrid lines can be either quite homogeneous or quite heterogeneous from cell to cell with respect to their content of human chromosomes. The degree of heterogeneity can now be accurately estimated by a simple graphical method. Many of the hybrid lines we studied were highly variable despite their presumptive clonal origin. In some lines, no two cells had the same complement of human chromosomes. Assuming these are true clones, the existence of so much heterogeneity in a line suggests that human chromosomes are still being lost. Miggiano, Nabholz & Bodmer (1969), using a different method of analysis, described similar variability in several man-mouse hybrid clones. One of their lines, 2W1, showed almost no karyotypic change over a 4-month period of cultivation, while another, 4W10, lost nearly 50% of its chromosomes in the same period of time. These authors were unable to distinguish clearly between loss of human chromosomes and loss of mouse chromosomes, whereas the use of a banding technique makes this distinction easy and reliable. The rate of loss of human chromosomes can now be estimated fairly accurately in a cloned line; it is proportional to the slope of the curve for the cumulative mean number of different human chromosomes in the hybrid line after about 10 cells have been examined. Implications for mapping The assignment of a human gene to a specific chromosome by the use of interspecific somatic cell hybrids is based on a high correlation between the presence of a given human gene product and the presence of a specific chromosome. Our results indicate that even clonal hybrid lines can be quite heterogeneous with respect to the human chromosomes they contain. This is both a handicap and an opportunity: a handicap in that the reliability of gene assignment is reduced because a human chromosome which may not be observed in a small sample of cells examined at metaphase may be present in a sufficiently large proportion of the hybrid cells to allow phenotypic expression of one of its genes, especially if the cytological and genetical studies are done at different times; and an opportunity in that further cloning may Chromosomes in man-mouse hybrid cells 823 permit the isolation of hybrid cell lines containing different human chromosomes, which would facilitate gene assignment. The discovery that all 24 human chromosomes are retained in one or more of the lines in this relatively small series of 19 man-mouse hybrid lines, the variation in the human chromosome complement among individual lines, and the evidence that human chromosomes are probably still being lost from some of the lines, indicate that the raw material is available for assigning genes to each human chromosome. Interspecific hybrid cells may also be useful in determining the linear order of genes. For this, translocation chromosomes may be quite helpful. Grzeschik et al. (1972) have used a naturally recurring human X-autosome translocation to show that the phosphoglycerate kinase locus is carried by the long arm of the X chromosome, while the glucose-6-phosphate dehydrogenase and inosinic acid pyrophosphorylase loci are probably on the short arm. In the same way, one might use translocations which arise in man-mouse hybrid cells. Migeon & Miller (1968) proposed the occurrence of an interspecific chromosomal rearrangement to account for the fact that hybrid cells, derived from the fusion of human cells with mouse cells lacking thymidine kinase, could still survive in HAT medium despite the disappearance of the human E-group chromosome carrying the structural locus for thymidine kinase. Boone et al. (1972) have presented cytogenetic evidence of the presence of such an interspecific translocation chromosome. We have been able to identify a series of human marker chromosomes derived from part of a normal chromosome. Markers derived from chromosomes 3, 5 or the Y were observed (Fig. 12), frequently in a minority of cells, indicating either a recent origin or loss of the marker. In 5 lines, a specific human marker chromosome was present in 90% or more of the cells, indicating either an origin closer to the formation of the hybrid cell line or selective retention of the marker, perhaps because of the incorporation of a segment of A9 chromosome essential to the survival of the hybrid cell. It is surprising that such a large proportion of the structural alterations we have observed involved human chromosome 3 or the Y. Either these chromosomes are more likely than others to undergo rearrangement in these hybrid cells or else rearrangements of these chromosomes are easier to recognize, possibly because they usually have a region of intense quinacrine fluorescence. The idea that structural changes can occur but that the quinacrine banding technique is just not sensitive enough to pick them up is supported by the absence of a recognizable human X chromosome or segment of an X in a high proportion of cells grown under conditions in which a product of an X-linked gene is essential for survival. The existence of a high level of structural chromosome instability in hybrid cells increases the difficulty of making gene assignments to specific chromosomes by the now standard method of correlating the presence of a specific human gene product with the presence of a specific chromosome. However, this difficulty could be overcome by analysing larger numbers of hybrid lines. This work was supported by grants from the National Cancer Institute, the National Foundation-March of Dimes, the Cancer Research Campaign and the Swedish Cancer Society. 824 P. W. Allderdice and others REFERENCES ALLDERDICE, P. W., MILLER, O. J., MILLER, D. 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Assignment of human thymidine kinase gene locus to chromosome 17 by identification of its distinctive quinacrine fluorescence in a man-mouse somatic hybrid. Science, N. Y. 173, 244-245WEISS, M. C. & GREEN, H. (1967). Human-mouse hybrid cell lines containing partial complements of human chromosomes and functioning human genes. Proc. natn. Acad. Sci. U.S.A. 58, 1104-1111. (Received 11 August 1972) Chromosomes in man-mouse hybrid cells 825 See Figs. 7-12 on pp. 826-830. 53 C E L 12 826 P. W. Allderdice and others ',0 M40 M41 M42 M43 M44 I I * M45 M46 11/ Fig. 7. Quinacrine fluorescent karyotype of a cell from A 9/Daudi line Cl 7, cell 21. Chromosomes in man-mouse hybrid cells 827 >l(Chlll« nuuiiiii Mil Hi t MM 1 I ( lit* It III I I " * ' • Fig. 8. C-banding patterns of the chromosomes in the same cell as in Fig. 7, arranged in the same order. 53-2 828 P. W. Allderdice and others Fig. 9. Relative sizes of selected A 9 and human chromosomes in three A 9/Daudi cells. 829 Chromosomes in man-mouse hybrid cells < III I Mil II ft * I I M40 Ml M41 M2 M42 M3 M43 M44 M45 M46 M51 I ft* Fig. 10. Quinacrine fluorescent karyotype of an A 9/Daudi cell from line Cl 6. §3° P. W. Allderdice and others Fig. i i . Composite karyotype. The chromosome on the left in each pair is from a man-mouse hybrid cell; the chromosomes on the right are from a single human leukocyte. Fig. 12. Human marker chromosomes from the hybrid cells. All have intensely fluorescent material which, with the banding patterns, is consistent with the following derivations: a, b, c, d, from chromosome 3; e, from the Y chromosome; and f, from chromosome 5.
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