R - MidasParameters Report MidasName Example Subject Subject_ID Unique Subject ID 000001 Subject_Name ***** Subject_Birth_Date [08/22/1993] would represent August 22, 1993 Subject_sex M Ethnic_Group Non-Hispanic Race White Referring_Physician_Name Rev. John Robert Quincy Adams, B.A. M.Div. [Adams^John Robert Quincy^^Rev.^B.A. M.Div.] [One family name; three given names; no middle name; one prefix; two suffixes.] Susan Morrison-Jones, Ph.D., Chief Executive Officer [MorrisonJones^Susan^^^Ph.D., Chief Executive Officer] [Two family names; one given name; no middle name; no prefix; two suffixes.] John Doe [Doe^John] [One family name; one given name; no middle name, prefix, or suffix. Delimiters have been omitted for the three trailing null components.] Study_Operator Albert Einstein Subject_Comments Patient was very uncomfortable in the magnet and it was difficult to get him to cooperate. Study Study_ID Unique ID of the Study 1.2.840.xxxxx.3.152.235.2.12.187636473 Study_Date 08/22/1993 would represent August 22, 1993. Study_Time Time the Study started. 1. “070907.0705 ” represents a time of 7 hours, 9 minutes and 7.0705 seconds. 2. “1010” represents a time of 10 hours, and 10 minutes. 3. “021 ” is an invalid value. Study_Description Epilepsy protocol B Modality MR Subject_Age Age at time of study [018M] would represent an age of 18 months. Subject_Weight Weight in Kg. 125.8 Institution_Name University of Miami school of Medicine Station_Name MR Center Tuesday, July 13, 2004 Page 1 of 6 MidasName Example Manufacturer Siemens Manufacturer_Model_Name Sonata Release_Version 128.234 Nucleus 31P, 1H Magnetic_Field_Strength 1.5 Precession_Frequency Receiver center frequency 63.502345 Series Series_ID Unique ID of the Series 1.2.840.xxxxx.3.152.235.2.12.187636473 Series_Number Series Number assigned by scanner Series_Date Date of acquisition 08/22/1993 would represent August 22, 1993. Series_Time Time of acquisition 1. “070907.0705 ” represents a time of 7 hours, 9 minutes and 7.0705 seconds. 2. “1010” represents a time of 10 hours, and 10 minutes. 3. “021 ” is an invalid value. Sequence_Name t2mri-2se-20-120 Scanning_Sequence Type of study SE Seq_Variant SP Acquisition_Type encoding scheme identifier 2D Series_Description head T1 weighted MRI Subject_Position HFS Spatial_Points_1 Number of points in 1st spatial dimension. 256 Spatial_Points_2 256 Spatial_Points_3 256 FOV_1 Field of View in mm 240.0 FOV_2 240.0 FOV_3 240.0 Spectral_width_1 Spectral width or sweep width Spectral_width_2 Spectral_points_1 Number of points in spectral dimension 512 Spectral_points_2 Tuesday, July 13, 2004 Page 2 of 6 MidasName Example Base_Resolution Readout_Over_Sampling Frequency oversampling 1 Slice_Interval Spacing between slices in mm. 1.0 Repetition_Time TR in usec. 1500.000 Flip_Angle Excitation angle in degrees 10.0 Inversion_Time TI in usec. 165.000 TM TM in usec. 25.000 Number_of_Averages 2 Scan_Options Acquisition options, e.g. gating, ect. FS Synchronization_Trigger NO TRIGGER Images_In_Series Number of images in this series 32 Transmit_Coil_Name Body Transmit_Coil_Type SURFACE Transmitter_Gain 25.1 Receiving_Coil_Name Head Receive_Coil_type BODY Receiver_Gain 66.0 Coverage_kSpace SQUARE Largest_Pixel_Value_In_Series Maximum value of all images 8123 Smallest_Pixel_Value_In_Series Minimum value of all images 728 Real_Dwell_Time Selected_Vol_1 Selected_Vol_2 Selected_Vol_3 Size of selected volume in mm Pixel_Spacing_1 pixel spacing in mm 0.89 Pixel_Spacing_2 0.80 Pixel_Spacing_3 Tuesday, July 13, 2004 Page 3 of 6 MidasName Example Header_Type Header Type may be an Image or Spectroscopy Selected_Vol_Position X Y Z Selected_Vol_Orientation Xc The following three parameters are coordinates of the unit vector along the column direction Yc Zc Xr Orientation vector of selected volume, row and column Yr Zr Dataset Byte_Order LittleEndian Dataset_ID File_Location c:\data\ or http://midas.med.miami.edu/data/373842 Compression NONE Acquisition_Date 08/22/1993 would represent August 22, 1993. Acquisition_Time 20030318073000.00000 which is 7:30am Data_Type MR image parameter type (Dicom usage) T2 MAP Data_Representation Integer or Complex Echo_Time TE in usec 25.000 Echo_Center Sample point corresponding to echo center 0 Prescans Total_Duration Acquisition_Matrix 192x256 Volume_Localization_Technique PRESS Transmitter_Frequency Slice_Thickness Slice thickness in mm Tuesday, July 13, 2004 3.0 Page 4 of 6 MidasName Slab_Thickness Example 32.000 Bits_Allocated Bits_Stored High_Bit Spectral_Points_Acquired_1 spectral data points acquired Spatial_Points_Acquired_1 acquisition size Spatial_Points_Acquired_2 acquisition size Spatial_Points_Acquired_3 acquisition size Number_Of_Slices Number of Slices in a dataset Data Image_Orientation_Xr Image orientation vector 1 Image_Orientation_Yr 0 Image_Orientation_Zr 0 Image_Orientation_Xc 1 Image_Orientation_Yc 0 Image_Orientation_Zc 0 Chemical_Shift_Reference PPM value at spectrum center point 4.70 First_Order_Phase_Correction 1st order phase correction in degrees over whole spectrum YES Number_of_Frames Number of frames in multiframe data. 6 Instance_Number Number assigned to each data file. 1 File_Name image001.dat Byte_Offset Offset in data file to start of the image, in bytes 1024 Mid_Slab_Position Selected_Volume_Position_Orientation_1 Vector to selected volume kspace_Filtering FERMI Zero_Order_Phase Zero -order phase correction value in degrees Tuesday, July 13, 2004 Page 5 of 6 MidasName Example First_Order_Phase_Pivot Pivot point number for 1st order phase correction Image_Position_X Image position vector 84.12 Image_Position_Y 0 Image_Position_Z 0 Frame Frame_ID Frame_Type Description of type of data in each frame Tuesday, July 13, 2004 NAA Integral Page 6 of 6
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