[CANCER RESEARCH 37, 1598-1601, June 1977] A New Deoxyuridine-5'-triphosphatase in Yoshida Sarcoma Cells Involved in Deoxyuridine 5'-Triphosphate Metabolism1 Teruo Arima, Hiroto Aklyoshi, and Setsuro Fujli2 Departmentof EnzymePhysiology,Institute for EnzymeResearch,School of Medicine,TokushimaUniversity,Kuramoto-Cho,Tokushima770,Japan SUMMARY MATERIALS AND METHODS A magnesium-independent deoxyuridine-5'-triphospha tase was found in Yoshida sarcoma cells but not in normal rat liver. The phosphatase is specific for deoxyuridine 5'diphosphate and deoxyuridine triphosphate, and its Kmfor deoxyuridine triphosphate is 2.7 x 10@ M. The enzyme was not inhibited by fluoride and required no divalent cations. Thus it differs from known nucleotide phosphatases. Deoxyuridine monophosphokinase , which is detectable Materials. Nucleotides were purchased from Sigma Chemical Co. , St. Louis, Mo. , and from Boehringer-Mann heim Japan Co., Ltd., Japan. All radioactive nucleotides were obtained from Japan Radioisotope Association, To kyo, Japan. ECTEOLA-3 and DEAE-cellulose were commer cial products. Hydroxylapatite was prepared by the method of Tiselius et a!. (10). Male Donryu rats weighing 80 to 100 g were maintained on laboratory chow with water given ad !ibitum and were used for i.p. transplantation of Yoshida sarcoma cells. For experiments on normal rat liver, male albino Wistar-King rats were used. Assay of Mononucleotide Kinases. The reaction mixture (0.25 ml) for dUMP kinase containing 10 @moles of Tris-HCI (pH 8.0), 2.5 @moles of MgCI2, 2 @moles of ATP, 0.25 @mole of [5-3H]dUMP (0.25 MCi), and enzyme was incubated at 37° for 30 mm and heated for 3 mm in a boiling water bath to stop the reaction. For assay of dTMP, CMP, and dCMP kinases, 0.25 @moIe of [5-3H]dTMP (0.25 pCi), 0.12 @moIe (0.12 pCi) of [2-'4C]CMP, and 0.12 @moIeof [2-14CIdCMP (0.12 MCi), respectively, were used as substrates in place of dUMP. The products of dTMP kinase and dUMP kinase were analyzed on an ECTEOLA-cellulose column as described elsewhere (8, 12). The products of CMP and dCMP kinase were analyzed by paper chromatography with isobutyric acid:concentrated NH4OH:water (66:1 :33, v/v/v) as solvent. The RF values of dCMP, dCDP, and dCTP were 0.5, 0.32, and 0.19, respectively. Radioactivity of the fractionated nu cleotides was counted in 10 ml of scintillator (4 g of PPO, 100 mg of POPOP, 1 liter of toluene, and 500 ml of Triton X 100). Kinase activity was expressed as nmoles of mononu cleotide converted to di- or trinucleotide per 30 mm. Determination of Masking of dUMP Kinase. A mixture of dUMP kinase (105,000 x g supernatant of normal rat liver homogenate in 0.25 M sucrose:10 mM Tris buffer) and the fraction containing the masking factor was incubated for 15 in a crude extract of normal rat liver, could not be detected in an extract of Yoshida sarcoma cells. However, with hy droxylapatite column chromatography deoxyuridine 5'-monophosphate of the extract, a kinase activity as high as that in normal rat liver was found in fractions separated from the phosphatase activity. Thus the absence of detecta ble deoxyuridine 5'-monophosphate kinase activity in the crude extract of Yoshida sarcoma cells is due to the pres ence of this nucleotide phosphatase. INTRODUCTION Mammalian DNA has no uracil residues, although purified DNA polymerase can incorporate dUTP into DNA. This ab sence of uracil residues could be due to inhibition of uridine phosphorylation or increased dUTP degradation. Previ ously, we reported (1) that the cytopiasmic fraction of Yosh ida sarcoma cells inhibited the dUMP-phosphoryiating ac tivity of normal rat liver. No inhibitor could be detected in normal rat liver cytoplasm, even when it was fractionated. It has also been reported (9) that no dUMP kinase is detecta ble in a crude calf thymus extract, but that it appears with fractionation of the extract. The mechanism of its appear ance is unknown. These studies, along with our results on the variability of dUMP kinase activity in different cell spe cies, suggested that the apparent activity must be due to the level of an inhibitor in cell extracts. In this work, we purified this inhibitor and found that it is a new nucleotide phospha tase that is specific for dUDP and dUTP, and that it has a very low Kmfor dUTP. Thus the apparent absence of dUMP kinase was shown to be due to product degradation. mm. Then 10 @molesof Tris-HCI (pH 8), 2.5 @moIesof MgCI2, 2 j.@moIesof ATP, and 0.25 @moleof [5-3H]dUMP (0.25 MCi) were added, and the mixture in a final volume of 0.25 ml was incubated for 30 mm at 37°.The products were analyzed as described before. Masking is expressed as the percentage reduction in activity of the dUMP kinase added. Fractionation of dUMP Kinase on a Hydroxylapatite Col umn. A 20% homogenate of normal rat liver or Yoshida sarcoma cells in 10 mr@ipotassium phosphate buffer (pH IThis work was supported inpart by agrant-in-aid for cancer research 2Present address: Institute for Protein Research, Osaka University, Suita, 3The abbreviation used is: ECTEOLA, epichlorohydrin triethanolam from the Ministry of Health and Welfare, and by a grant-in-aid for scientific research from the Ministry of Education, Science, and Culture, Japan. Osaka 565, Japan. ReceivedOctober13, 1975;acceptedJanuary18, 1977. 1598 CANCER RESEARCH Downloaded from cancerres.aacrjournals.org on June 16, 2017. © 1977 American Association for Cancer Research. VOL. 37 A New dUTPase 7.5)was centrifuged at 105,000 x g for60 mm. The resulting supernatant was mixed with 10 volumes of cold acetone at minus 10°.The precipitate was collected by centrifugation at 105,000 x g for 30 mm and air dried. One g of acetone powder was extracted with 20 ml of ice-cold 10 mM potas sium phosphate buffer with the use of a Teflon homoge nizer, and the mixture was centrifuged for 30 mm at 10,000 x g. Theresultingsupernatantwasappliedto a hydroxyla patite column previously equilibrated with 10 mM potassium phosphate buffer. In this way, dUMP kinase was purified about 10-fold from the extract of the acetone powder of normal rat liver. The preparation was not contaminated with dUDP kinase. Nucleotide Phosphatases with High KmValues. A reac tion mixture (0.25 ml) containing 2.5 @moles of Tris-HCI (pH 8.0), 1.25 @moles of MgCI2, 0.25 @moIe of various kinds of unlabeled nucleotide, and enzyme was incubated at 37°for 30 mm. The reaction was stopped by the addition of 1 ml of cold 5% trichloroacetic acid, and the P1formed was esti mated colorimetrically by the method of Fiske and SubbaRow (3). Nucleotide Phosphatase with a Low Km. The reaction mixture was the same for nucleotide phosphatase with high Km'S, except that 0.025 @moIeof labeled nucleotides used instead of unlabeled substrates. analyzed by paper chromatography or lose column chromatography. Protein estimated by the method of Lowry et serum albumin used as a standard. was The products were by ECTEOLA-ceilu concentration was a!. (7) with bovine 1.5 Fraction [email protected]' Chart2. DEAE-cellulose columnchromatographyof Yoshidasarcomacell extract. Fraction 2 (10 ml) described in the text was charged on a DEAE cellulose column that had been equilibrated with 10 [email protected] buffer (pH 8.0). The column was eluted with 600 ml of a linear gradient of zero to 0.4 M NaCI in 10 m@iTris buffer. dUMP kinase, masking factor, and nucleotide phospha tases were assayed as described in “Materials and Methods―and the legend to Chart 1. 0, masking activity for dUMP kinase; U, low-K,,, dUTPase; 0, high-K,,, dUTPase; •,high-K,@dUDPase; A, high-K,,, dUMPase; . . ‘ . , pro tein. RESULTS 1.0 EvIdence for Latent dUMP Kinase Activity in Yoshida Sarcoma Cell Extracts. We reported previously (1) that dUMP kinase activity was rather low in regenerating rat liver :@52 and very low in rapidly growing tissues such as Yoshida sarcoma, Ehrlich ascites tumor cells, rat bone marrow, and embryonic rat liver. This could be due to masking of the 0 @‘enzyme. To test this possibility, extracts of Yoshida sar @ i.5 @:coma cells and normal ratliver were fractionated byhydrox 1.0 )5 0 Fraction Number Chart 1. Hydroxylapatite column chromatography of crude extracts of Yoshida sarcoma cells and normal rat liver. The acetone powder extract of Yoshida sarcoma cells (A) or normal rat liver (B) was charged on a hydroxyl apatite column and eluted with 800 ml of a linear gradient of 0.01 to 0.2 N phosphate buffer. Shown are dUMP kinase (C) and the activity of the mask ing factor (0) on normal rat liver dUMP kinase (20 @.tmoles of input activity taken as 100%); ‘ ‘ ‘ ‘ , protein. ylapatite column, as described in “Materials and Methods.― Chart 1A shows the appearance of dUMP kinase activity with hydroxylapatite column chromatography of the Yosh ida sarcoma cell extract. A comparison ofA and B in Chart 1 shows that, in fact, Yoshida sarcoma cells have as high a dUMP kinase activity as normal rat liver. Thus, the activity must be masked in these cells. The factor that masks the activity was detected in an adsorbed fraction of the Yoshida sarcoma cell extract but not in a normal rat liver extract. involvement of a Nucleotide Phosphatase In Masking of dUMP Kinase. The factor causing masking of dUMP kinase activity was partially purified as follows: a homogenate of Yoshida sarcoma cells in 200 ml of 0.25 M sucrose:10 mM Tris-HCI buffer (pH 8.0) was centrifuged at 105,000 x g for 60 mm and the supernatant fluid was obtained (Fraction 1). Ammonium sulfate was added to 30% saturation, and the resulting precipitate was removed by centrifugation. Fur JUNE 1977 Downloaded from cancerres.aacrjournals.org on June 16, 2017. © 1977 American Association for Cancer Research. 1599 T. Arima et a!. @ ther solid ammonium sulfate was added to the supernatant to 60% saturation. The precipitate formed was collected and dissolved in 10 ml of 0.01 M Tris buffer (Fraction 2). This fraction was analyzed by DEAE-cellulose column chroma tography. As shown in Chart 2A, the factor was eluted as a single peak from the column in a position @ @ @ coinciding with a dUTPase with a low Km.The addition of this fraction to an assay mixture of dUMP kinase that had been incubated for 30 mm decreased the amount of newly synthesized dUDP or dUTP. Thus, the dUMP kinase activity in the Yoshida sar coma cell extract forming dUDP or dUTP was masked by the dUTPase. Chart 28 shows that other nucleotide phospha tases with high Km'Sdid not participate in masking of dUMP kinase activity. The fractions of eluate containing the dUTPase were combined , concentrated , and dialyzed against 0.01 M potassium phosphate buffer (Fraction 3). Then 4 ml of Fraction 3 were further fractionated on a hydroxylapatite column. The elution profile in Chart 3 shows that the dUTPase activity in the adsorbed fraction coincided completely with the dUMP kinase-masking activ ity. Some masking activity was observed in the unadsorbed fraction, but we could not detect the dUTPase activity in this fraction. The masking activity in the unadsorbed fraction was also detected in the same fraction of normal rat liver. Therefore, this masking activity is different from that in the adsorbed fraction, but its properties are unknown. Phosphatases for dUMP, dUDP, and dUTP with high Km'S were notdetectable intheadsorbedfraction (Fraction 4).In this way, the dUTPase with a low Kmwas purified about 11fold from the crude extract. This fraction was used for further I A 2 3 ‘ 2 3 mooo E 0 5 R@C@ i a 3 @‘ @‘ C 2 4 3 S I, - I E C I II 2 II cm cm 3 I S studies. Substrate Specificity of the dUTPase. Chart 4 shows paper chromatograms obtained after treatment of deoxyri bonucleoside triphosphates with Fraction 4 enzyme. dATP, dGTP, dCTP, and dTTP were not hydrolyzed significantly, but dUTP was hydrolyzed to dUDP and dUMP. To determine whether production of dUMP from dUTP was due to release of PP@or to secondary hydrolysis of dUDP, hydrolysis of tritium-labeled dUDP by Fraction 4 was examined. As shown in Table 1, dUDP was significantly hydrolyzed to dUMP. The Kmof Fraction 4 enzyme was calculated to be 2.7 x 10-i M from a Lineweaver-Burk plot. >‘ .@ 0.8 0.62 @ cm Chart 4. Paper chromatograms of deoxyribonucleoside triphosphates after incubation with Fraction 4 enzyme; 0.1 [email protected] triphos phates (1 pCi) were incubated with Fraction 4 enzyme for 30 mm as de scribed in “Materials and Methods,―and 0.1-mi samples of the hydrolysates were spotted on Tokyo filter paper No. 50 and developed with isobutyric acld:water:ammonia:O.1 N EDTA (100:56:4.2:1 .6 by volume) for 20 hr at room temperature. The paper was cut into 5-mm wide strips and radioactivity was counted in a toluene scintillator. A, dUTP; B, dCTP; C, dTTP; D, dGTP; E, dATP. Arrows 1, 2, and 3 Indicate the positions of deoxyribonucleoside triphosphate, diphosphate, and monophosphate, respectively. The abscissa Indicates the distance from the origin without enzyme ( ‘ ‘ . . ) and with Frac tion 4 enzyme (—). Table 1 Comparisonof hydro!yzing activity of Fraction 4 for dUDPand dUTP 0.4 Concentration (nM)Activity― (dUMP 3 ,@ formed)InitialResidualdUDP230119111dUTP217107110 0.2 0 @ 0 0 20 FroctionNL(nber Chart 3. Hydroxylapatite column chromatography of Fraction 3. Four ml of Fraction 3 were charged on a hydroxylapatite column (2 x 6 cm) equil ibrated with 0.01 U potassium phosphate buffer (pH 7.5). The column was developed with a linear gradient of 0.01 to 0.2 N phosphate buffer. The maskingactivity and Iow-K,,@ dUTPaseactivitywereassayedas describedin the legend to Chart 2. kinase. 1600 @, low-K,..,dUTPase; 0, masking activity for dUMP a The hydroiyzing activity of Fraction 4 was assayed with the indicated concentration of tritium-labeled dUDP or dUTP as sub strates. Effects of Deoxyribonucleoside Di- and Triphosphates on dUTP Hydrolysis by the Fraction 4 Enzyme. As shown in Table 2, of the deoxyribonucleoside di- and triphosphates tested, only dUDP and dUTP had dilution effects on dUTP CANCER RESEARCHVOL. 37 Downloaded from cancerres.aacrjournals.org on June 16, 2017. © 1977 American Association for Cancer Research. A New dUTPase Table 2 Effects of variousnucleotides on dUTPhydrolysisby Fraction 4AdditionConcentration (mM)Activity' (%)None dUDP 36 dUTP dCDP 0.4 0.4 0.2 20 15 90 0.4 97 dCTP 0.4 dTDP 95 0.2 105 0.4 97 dTTP 0.4 dADP 0.2 89 94 0.4 100 dATP 0.4 91 dGDP 0.2 105 100 0.4 0.4100 dGTP0.2 97 a One hundred % enzyme activity indicates 8.2 nmoles dUMP produced per 30 mm incubation. The activity was assayedwith 0.1 mM dUTP as substrate and the products were analyzed by EC TEOLA-cellulosecolumn chromatography. ISO (A) 100 normal rat liver. Thus its function seems to be to regulate the size of the dUTP pool, probably by its controlled synthe sis in various phases of cell growth, and its specific action on dUDP and dUTP seems functionally significant. We did not examine the hydrolyses of ribonucleoside triphosphates directly, but it seems unlikely that these compounds are susceptible to the dUTPase, because Yoshida sarcoma cells have as high mono- and diphosphokinase activities for AMP, CMP, and UMP as normal rat liver, so that only dUMP kinase activity was masked. Moreover, we found that the addition of Fraction 4 did not affect the assays of AMP, CMP, and UMP kinases, so that the products of these en zymes, ribonucleoside di- or triphosphates, were not hydro lyzed by the dUTPase. This nucleotide phosphatase differs from microbial dUTPases, such as T2, T4 phage-induced dUTPases (5, 11, 13) and Escherichia coli dUTPase (2, 6), which have 10 to 40 times higher Kmvalues. It also differs from the dUTPase in leukemia L1210 cells (4), which hydro lyzes dUTP to dUMP and PP1,but does not hydrolyze dUDP and is inhibited by fluoride. Magnesium-dependent nucieo tide phosphatases seem to have no influence on dUTP formation because normal rat liver has a higher dUMP ki nase activity than Yoshida sarcoma cells, although it also contains higher magnesium-dependent nucleotide phos phatase activity than the latter. .@ ACKNOWLEDGMENTS :150 The authors express their gratitude to Kazuko Fujiwara for expert techni cal assistance. ) 5 I: @ 0 IC IS M9CI2 ( mM) 20 REFERENCES 1. Arima, T., and Fujii, S. Inhibitor of Pyrimidine Metabolism from Tumor Tissues. Biochem. Biophys. Res. Commun., 55: 410-416, 1973. 2. Bertani, L. E., Haggmark, A., and Reichard, P. Enzymatic Synthesis of Deoxyribonucleotldes II. Formation and Interconversion of Deoxyuridine Phosphates. J. Biol. Chem., 238: 3407-3413, 1963. (B) 3. Fiske, C. H., and SubbaRow,Y. The Colorimetric Determinationof 10 20 Phosphorus. J. Biol. Chem., 66: 375—400, 1925. 4. Grindey, B. G., and Nichol, C. A. Mammalian Deoxyuridlne 5'-Triphos phate Pyrophosphatase. Biochim. Biophys. Acts, 240: 180-183, 1971. 40 5. Greenberg,G. R. NewdUTPaseanddUDPaseActivitiesafterInfectionof NoF ( mM) Chart 5. Effects of MgCI, and NaF on the dUTP phosphatase activity. dUTPase in Fraction 4 was assayed as described in “Materials and Methods― with various concentrations of MgCI, (A) and NaF (B). hydrolysis. This indicates that the enzyme hydrolyzed dUDP but not dADP, dCDP, dGDP, and dTDP, confirming the result shown in Chart 4. Thus the nucleotide phosphatase is specific for dUDP and dUTP. Effects of MgCl and Sodium Fluoride. As shown in Chart 5, various concentrations of MgCI2 had no stimulatory ef fect, and the addition of NaF was not inhibitory. 7. Lowry,0. H., Rosebrough,N. J., Farr,A. L., and Randall,R. J. Protein Measurement with the Folin Phenol Reagent. J. BioI. Chem. , 193: 265275, 1951. 8. Shlosaka,T., Omura,Y., Okuda,H., andFujii, 5. ActIvationof Thymidine Kinase of Adult Rat Liver by the Culture Filtrate of Clostridlum perfrin gens. Biochim. Biophys. Acta, 240: 352-358, 1970. 9. Sugino,Y., Tanaka,F., and Miyoshi,Y. LatentDeoxyuridineMonophos phokinasein CalfThymus.Biochem.Biophys.Res.Commun.,16:362367, 1964. 10. Tlsellus, A., Hjerten, S., and Levin, 0. Protein Chromatography on Calcium Phosphate Column. Arch. Blochem. Biophys., 65: 132-155, 1956. 11. Warner, H. A., and Barnes, J. E. Evidencefor a Dual Role for the DISCUSSION This work showed the presence of a magnesium-inde pendent nucleotide phosphatase specific for dUDP and dUTP in Yoshida sarcoma cells. This enzyme hydrolyzed di- and triphosphates Escherichia coil by T, Bacteriophage. Proc. NatI. Acad. Sd. U. 5., 56: 1226—1232, 1966. 6. Greenberg, G. R., and Somerville, R. L. Deoxyuridylate Kinase Activity and Deoxyuridine Triphosphatase in Escherichia coli. Proc. NatI. Acad. Sd. U. 5., 48: 247-257, 1962. of deoxyuridine formed by dUMP ki nase and so masked its activity. It could not be detected in Bacteriophage Tclnduced Deoxycytidine Triphosphate Nucleotidohy drolase. Proc. NatI. Aced. Sci. U. S., 56: 1233-1240, 1966. 12. Weissmann, S. M., Smellie, R. M. S., and Paul, J. Studies on the Biosynthesis of Deoxyribonucleic Acid by Extracts of Mammalian Cells. lv. The Phosphorylatlon of Thymidine. Blochim. Biophys. Acts, 45: 101- 110,1960. 13. Zimmerman,S. B., andKornberg.A. DeoxycytidineDi-andTriphosphate Cleavage by an Enzyme Formed in Bacteriphage-infected Escherichia coil. J. BioI. Chem., 236: 1480-1486, 1961. JUNE 1977 Downloaded from cancerres.aacrjournals.org on June 16, 2017. © 1977 American Association for Cancer Research. 1601 A New Deoxyuridine-5′-triphosphatase in Yoshida Sarcoma Cells Involved in Deoxyuridine 5 ′-Triphosphate Metabolism Teruo Arima, Hiroto Akiyoshi and Setsuro Fujii Cancer Res 1977;37:1598-1601. 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