ab83355 ATP Assay Kit Colorimetric/Fluorometric Instructions for Use For the rapid, sensitive and accurate measurement of ATP in various samples. This product is for research use only and is not intended for diagnostic use. ab83355 ATP Assay Kit (Colorimetric/Fluorometric) 1 ab83355 ATP Assay Kit (Colorimetric/Fluorometric) Table of Contents 1. Overview 3 2. Protocol Summary 4 3. Components and Storage 5 4. Assay Protocol 7 5. Data Analysis 9 6. Troubleshooting 11 2 ab83355 ATP Assay Kit (Colorimetric/Fluorometric) 1. Overview ATP is the primary energy currency of living systems. Virtually all energy requiring processes utilize the chemical energy stored in the phosphate bond of ATP. ATP is formed exclusively in the mitochondria and a variety of genetic diseases can affect ATP formation in the mitochondria. There are ATP assays kits which detects femtomoles or less of ATP by measuring luminescence but these kits require specialized luminescence instrumentation and utilize luciferase which can be difficult to maintain in active form. Abcam’s newly developed ATP Assay Kit (Colorimetric/Fluorometric) is designed to be a robust, simple method which utilizes the phosphorylation of glycerol to generate a product that is easily quantified by colorimetric (λ max = 570 nm) or fluorometric (Ex/Em = 535/587 nm) methods. The assay can detect as low as 50 picomol (1 µM) of ATP in various samples. The kit provides sufficient reagents for 100 assays. 3 ab83355 ATP Assay Kit (Colorimetric/Fluorometric) 2. Protocol Summary Sample Preparation Standard Curve Preparation Add Reaction Mix Measure Optical Density or Fluorescence 4 ab83355 ATP Assay Kit (Colorimetric/Fluorometric) 3. Components and Storage A. Kit Components Item Quantity ATP Assay Buffer 25 mL ATP Probe (in DMSO) 0.2 mL ATP Converter 1 vial Developer Mix (Lyophilized) 1 vial ATP Standard (1 µmol; Lyophilized) 1 vial * Store kit at -20°C, protect from light. Warm ATP Assay Buffer to room temperature before use. Briefly centrifuge all small vials prior to opening. ATP PROBE: Ready to use as supplied. Warm to room temperature prior to use to melt frozen DMSO. Store at -20°C, protect from light and moisture. Use within two months. ATP CONVERTER, DEVELOPER MIX: Dissolve in 220 µl ATP Assay Buffer separately. Aliquot and store at -20°C. Use within two months. 5 ab83355 ATP Assay Kit (Colorimetric/Fluorometric) ATP STANDARD: Dissolve in 100 µl of distilled water to generate 10 mM stock solution. Keep cold while using. Store at -20°C. B. Additional Materials Required • Microcentrifuge • Pipettes and pipette tips • Fluorescent or colorimetric microplate reader • 96 well plate • Orbital shaker 6 ab83355 ATP Assay Kit (Colorimetric/Fluorometric) 4. Assay Protocol 1. Sample Preparation: 6 a) Tissue (1-10 mg) or cells (1 x 10 ) can be lysed in 100 µl of ATP Assay Buffer. b) Due to the lability of ATP, for more accurate assays, the sample should be quick frozen using liquid N2 or dry ice if it is to be assayed at a later date. It is also recommended that the sample be homogenized using perchloric acid. Alternatively, 10kDa spin columns (ab93349) can be used to get rid of interfering enzymes present in the sample. c) Centrifuge ice cold at 15,000 x g for 2 minutes to pellet insoluble materials. d) Collect supernatant and add 2-50 µl to 96-well plate, bring final volume to 50 µl/well with ATP Assay Buffer. For unknown samples, we suggest testing several doses of your sample to make sure the readings are within the standard curve range. 2. Standard Curve Preparation: a. For the colorimetric assay: Dilute 10 µl of the ATP Standard with 90 µl of dH2O to generate 1 mM ATP standard, mix well. Add 0, 2, 4, 6, 8, 10 µl into a series 7 ab83355 ATP Assay Kit (Colorimetric/Fluorometric) of wells and adjust volume to 50 µl/well with ATP Assay Buffer to generate 0, 2, 4, 6, 8, 10 nmol/well of ATP Standard. b. For the fluorometric assay: Further dilute the ATP Standard to 0.01- 0.1 mM with dH2O (Detection sensitivity is 10-100 fold higher with the fluorometric than with the colorimetric assay). Follow the procedure as for the colorimetric assay. 3. ATP Reaction Mix: Mix enough reagent for the number of samples and standards to be performed: For each well, prepare a total 50 µl Reaction Mix: Colorimetric Assay Fluorometric Assay ATP Assay Buffer 44 µl 45.8 µl ATP Probe 2 µl 0.2 µl* ATP Converter** 2 µl 2.0 µl Developer Mix 2 µl 2.0 µl * Note: For the fluorometric assay, use 1/10 of the probe to reduce fluorescence background. **Note: Glycerol phosphate generates background. If significant amount of glycerol phosphate is suspected in your sample, a glycerol phosphate background control may be performed by replacing the 2 µl ATP converter with 2 µl of ATP Assay Buffer. In the absence of ATP converter, the assay detects only glycerol 8 ab83355 ATP Assay Kit (Colorimetric/Fluorometric) phosphate, but not ATP. The glycerol phosphate background should be subtracted from ATP reading. 4. Mix well. Incubate at room temperature for 30 minutes, protect from light. 5. Measure OD at 570 nm for colorimetric assay or Ex/Em = 535/587 nm for fluorometric assay in a microplate reader. The signals are stable for over two hours. 5. Data Analysis Correct background by subtracting the value derived from the zero ATP standard from all standard and sample readings. Plot the standard curve. Apply ATP sample readings to the standard curve. ATP concentration can then be calculated: Concentration = Ts / Sv nmol/µl or mol/ml or mM Where: Ts is ATP amount in the reaction well from standard curve (nmol). Sv is the sample volume added into sample wells (µl). ATP molecular weight: 507.18 g/mol. 9 ab83355 ATP Assay Kit (Colorimetric/Fluorometric) 10 ab83355 ATP Assay Kit (Colorimetric/Fluorometric) 6. Troubleshooting Problem Reason Solution Assay not working Assay buffer at wrong temperature Assay buffer must not be chilled - needs to be at RT Protocol step missed Plate read at incorrect wavelength Unsuitable microtiter plate for assay Unexpected results Re-read and follow the protocol exactly Ensure you are using appropriate reader and filter settings (refer to datasheet) Fluorescence: Black plates (clear bottoms); Luminescence: White plates; Colorimetry: Clear plates. If critical, datasheet will indicate whether to use flat- or U-shaped wells Measured at wrong wavelength Use appropriate reader and filter settings described in datasheet Samples contain impeding substances Unsuitable sample type Sample readings are outside linear range Troubleshoot and also consider deproteinizing samples Use recommended samples types as listed on the datasheet Concentrate/ dilute samples to be in linear range 11 ab83355 ATP Assay Kit (Colorimetric/Fluorometric) Samples with inconsistent readings Unsuitable sample type Samples prepared in the wrong buffer Samples not deproteinized (if indicated on datasheet) Cell/ tissue samples not sufficiently homogenized Too many freezethaw cycles Samples contain impeding substances Samples are too old or incorrectly stored Lower/ Higher readings in samples and standards Not fully thawed kit components Out-of-date kit or incorrectly stored reagents Reagents sitting for extended periods on ice Incorrect incubation time/ temperature Incorrect amounts used Refer to datasheet for details about incompatible samples Use the assay buffer provided (or refer to datasheet for instructions) Use the 10kDa spin column (ab93349) Increase sonication time/ number of strokes with the Dounce homogenizer Aliquot samples to reduce the number of freeze-thaw cycles Troubleshoot and also consider deproteinizing samples Use freshly made samples and store at recommended temperature until use Wait for components to thaw completely and gently mix prior use Always check expiry date and store kit components as recommended on the datasheet Try to prepare a fresh reaction mix prior to each use Refer to datasheet for recommended incubation time and/ or temperature Check pipette is calibrated correctly (always use smallest volume pipette that can pipette entire volume) 12 ab83355 ATP Assay Kit (Colorimetric/Fluorometric) Problem Reason Solution Standard curve is not linear Not fully thawed kit components Wait for components to thaw completely and gently mix prior use Pipetting errors when setting up the standard curve Incorrect pipetting when preparing the reaction mix Air bubbles in wells Concentration of standard stock incorrect Errors in standard curve calculations Use of other reagents than those provided with the kit Try not to pipette too small volumes Always prepare a master mix Air bubbles will interfere with readings; try to avoid producing air bubbles and always remove bubbles prior to reading plates Recheck datasheet for recommended concentrations of standard stocks Refer to datasheet and re-check the calculations Use fresh components from the same kit For further technical questions please do not hesitate to contact us by email ([email protected]) or phone (select “contact us” on www.abcam.com for the phone number for your region). 13 ab83355 ATP Assay Kit (Colorimetric/Fluorometric) 14 UK, EU and ROW Email: [email protected] Tel: +44 (0)1223 696000 www.abcam.com US, Canada and Latin America Email: [email protected] Tel: 888-77-ABCAM (22226) www.abcam.com China and Asia Pacific Email: [email protected] Tel: 108008523689 (中國聯通) www.abcam.cn Japan Email: [email protected] Tel: +81-(0)3-6231-0940 www.abcam.co.jp Copyright © 2012 Abcam, All Rights Reserved. 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