CH16 01/30/2014 0:7:29 Page 361 j 361 16 Extracellular Hemoglobins from Annelids, and their Potential Use in Biotechnology Franck Zal and Morgane Rousselot Abstract This chapter highlights the diversity of invertebrate hemoglobin structures, and gathers together up of 100 years of research data. Among invertebrates, annelid hemoglobin structures have been the most widely studied, probably due to their typical symmetric shapes and sizes that allow direct observations to be made using transmission electron microscopy. Hemoglobin seems to be present in all phyla, which suggests a very ancient origin. Using the hemoglobin of the marine annelid Arenicola marina, the French biotechnology startup HEMARINA is developing medical 16.1 Introduction All aerobic cells require oxygen and nutrients to fuel their energetic and growth requirements. They find these elements in their environment for biomolecule synthesis, and discard the degradation products of their metabolism. However, multicellular organisms are not directly in contact with the external environment where oxygen is available, and in this context two physical mechanisms exist for the transportation of the respiratory gases (oxygen and carbon dioxide), namely diffusion and convection. Diffusion mechanisms are effective only over small distances (millimeters or less), and so the process plays an important role only in unicellular organisms. If the distance between the external and internal media is important, however, then a convection process will be substituted in place of diffusion. Yet, these two processes may intervene at either the same time or separately during the circulation and respiration processes. The primary function of the circulation process involves the requirements for oxygen and nutrients, as well as the elimination of carbon dioxide and metabolic waste. Consequently, the circulating fluids establish important ties between distant specialized cellular populations and the external environment via the intermediate of the exchange organs. In this context, blood has a key position as it contains specialized molecules known as respiratory pigments. These exist either intracellularly or extracellularly, and are able to bind oxygen in a reversible fashion, which increases considerably the ability of the blood to carry these gases. products. The first generations of blood substitutes (hemoglobin oxygen carriers) were manufactured using intracellular hemoglobin (human and bovine) in order to function outside the red blood cells. However, HEMARINA technologies are based on a natural extracellular hemoglobin. This circulatory pigment, which is present in the blood vessels of A. marina, has evolved over a million years and is able to function extracellularly. Currently, two main products are under development at HEMARINA, namely HEMO2life1 (for organ preservation) and HEMOXYCarrier1 (as a universal oxygen carrier). During evolution, three different categories of oxygen carriers were selected, each of which retained a characteristic color (Table 16.1). Of these pigments, hemoglobin (Hb), with a typical red color, is the most familiar and is present in almost all phyla, whereas chlorocruorin, which is very similar to the Hb, is characterized by a green color and exists in four families of polychete annelids. Hemocyanin, a blue pigment, is currently present in certain mollusks and arthropods, while hemerythrin, which is pink in color occurs more sporadically among the animal kingdom (Figure 16.1). The heme-containing pigments are the most common among life kingdom as they are found in 33% of zoological classes (Toulmond, 1992); yet, surprisingly, these pigments are also present in plants (Landsmann et al., 1986; Bogusz et al., 1988; Fuchsman, 1992). Although the molecules are characterized by an important diversity of molecular weight and structure (Royer, 1992; Terwilliger, 1992), the active site is always similar and is constituted by a protoporphyrinic tetrapyrrolic ring (Mr ¼ 616.5 Da) that has an iron atom at the center (Fe2þ) (Figure 16.2). This Fe–protoporphyrin complex constitutes the heme molecule. The same active site is also found in other enzymes, such as cytochromes, catalases and peroxidases. In the case of hemoglobin the iron atom is only bound by an amino acid from the polypeptide chain, the proximal histidine. The complex constituted by the active site and the polypeptide chain forms the basic functional unit that is able to bind oxygen only in a reversible fashion. Two categories of heme-containing groups exist, but in both cases the heme molecule is a chelate of iron associated with Outstanding Marine Molecules: Chemistry, Biology, Analysis, First Edition. Edited by Stephane La Barre and Jean-Michel Kornprobst. Ó 2014 Wiley-VCH Verlag GmbH & Co. KGaA. Published 2014 by Wiley-VCH Verlag GmbH & Co. KGaA. CH16 01/30/2014 362 j 0:7:29 Page 362 16 Extracellular Hemoglobins from Annelids, and their Potential Use in Biotechnology Table 16.1 Classification and localization of the different respiratory pigment across the animal and plant kingdoms. Pigments (localization) Phylum Mr (Da) Active sites Na) Intracellular Hemerythrin Without heme Sipunculida Brachiopoda Annelida Priapula 40–110 103 2 Fe atoms 2 Arthropoda Mollusca 4 105 to 3 106 3 106 to 9 106 2 Cu atoms 6–48 70–160 65 103 1 Fe atom 4 17–130 103 1 Fe atom 1–8 1 Fe atom 1 Fe atom 1 Fe atom 1 Fe atom 1 1 1 1 1 Extracellular Hemocyanin Intracellular Hemoglobin stricto sensu Hemoglobin of invertebrates dissolved in their body fluids Hemoglobin cytoplasmic Myoglobin Hemoglobin Leghemoglobin Neurhemoglobin Extracellular Hemoglobins Erythrocruorin Chlorocruorin With heme Vertebrate Mollusca Echinodermata Annelida Echiuria Vertebrate Invertebrate Bacteria Leguminous plants Annelida Platyhelminthes Nematyhelminthes Nemerta Mollusca Arthropoda Annelida Vestimentifera Pogonophora Annelida 17 103 to 12 106 4 105 To 4 106 3 106 to 4 106 1 to >8 >8 >8 a) N ¼ no. of active sites capable of binding an oxygen molecule. a protoporphyrin IX which is termed ferroprotoheme and CH2); this complex is the contains two vinyl groups (CH most common (Falk, 1975), but in ferrochlorocruoroporphyrin or chlorocruoroheme the vinyl group is replaced by a formyl group (CH¼O) (Fischer and Seemann, 1936) (Figure 16.2). The latter group is present only in the chlorocruorins. It is possible to distinguish between five different categories of globin chains (for a review, see Vinogradov et al., 1993): Single-domain chains are the most common in the animal kingdom. They comprise about 145 amino acids and have an active site, and their existence is documented as three different Hbs, namely intracellular, extracellular, or cytoplasmic. These chains can associate to create monomeric, dimeric, tetrameric or polymeric Hbs. Truncated single-domain chains that contain about 116–121 amino acids. Chimeric single-domain chains have Mr 40 kDa, are cytoplasmic, and are characterized by an N-terminal region that is able tobind a heme group and a C-terminal with several functions. The chimeric bi-domain chains (40 kDa) are created by the covalent association of two domain chains, one of which bears a heme group. Linear chimeric multidomain chains created by the covalent association of several globin domains. The main aim of this chapter is to describe the invertebrate hemoglobins known to date, and briefly to review the extracellular Hbs obtained from annelids. The details also provided of two therapeutical applications from Arenicola marina Hb. 16.2 Annelid Extracellular Hemoglobins With numerous reviews having been produced on annelid extracellular hemoglobins (EHbs) and chlorocruorins, the interest of the international “invertebrate hemoglobinist” community was directed towards this remarkable family of molecules (Mangum, 1976a; Mangum, 1976b; Antonini and Chiancone, CH16 01/30/2014 0:7:29 Page 363 16.2 Annelid Extracellular Hemoglobins j 363 Figure 16.1 Occurrence of the respiratory pigments among the major phyla and classes (Toulmond and Truchot, 1993). The color dots indicate the type of respiratory pigments eventually present. Red ¼ hemoglobins; green ¼ chlorocruorins; purple ¼ hemerythrins; blue ¼ hemocyanins. The absence of a dot means that no respiratory pigment has yet been detected. However, the presence of dot does not mean that all of the group’s species possess the respiratory pigment mentioned. With kind permission by La Recherche. 1977; Weber, 1978; Chung and Ellerton, 1979a; Garlick, 1980; Vinogradov et al., 1980c; Vinogradov, Kapp, and Ohtsuki, 1982; Vinogradov, 1985a; Vinogradov, 1985b; Gotoh and Suzuki, 1990; Riggs, 1990; Terwilliger, 1992; Lamy et al., 1996). The EHbs are present in the three annelids classes, namely polychetes, oligochetes, and achetes. The molecules are very large biopolymers with high molecular weights in the range of 3000– 4000 kDa, and corresponding sedimentation coefficients of 54–61 S, respectively. Each molecule consists of an assembly of about 200 polypeptide chains that belong to between six and eight different types that are usually grouped into two categories: Functional chains, which possess an active site that is able to bind oxygen reversibly, and correspond to globin chains with Mr-values of about 15 and 18 kDa. Linker chains, which possess very few or no heme groups and play an important role in the assembly of one-twelfth of the molecule. These chains have Mr-values of between 22 and 27 kDa. Some authors have revealed the importance of glycans on the assembly of EHbs from Perinerreis aibuhitensis, and have termed this mechanism “carbohydrate gluing” (Ebina et al., 1995; Matsubara et al., 1996; Yamaki et al., 1996). However, this mechanism cannot be universal as not all of these molecules are glycosylated (e.g., Arenicola marina EHb; Zal et al., 1997a, 1997b). The EHbs of annelid are likewise characterized by an acidic isoelectric point and low heme and iron contents, about two-thirds of that observed for other hemoglobins, and corresponding to the presence of one mole of heme per 20000– 27000 Da of protein. This result indicated that not all of the CH16 01/30/2014 364 0:7:32 j Page 364 16 Extracellular Hemoglobins from Annelids, and their Potential Use in Biotechnology COO– COO– (a) CH2 CH2 CH2 HC C C C C C C C C H C CH3 C H3 C C C C C CH N N CH2 C Fe C C C C CH3 H2C C H CH2 CH2 H C C C C N C N C N C C N C C H CH3 CH Fe C C C HC C C CH2 CH2 CH2 N N HC H2C H C COO– COO– (b) C C CH3 C C O CH3 H H Figure 16.2 Heme structure (Toulmond and Truchot, 1993). (a) Ferroprotoporphyrin or ferroprotoheme (porphyrin IX) corresponding to the hemoglobin oxygen-binding site; (b) Ferrochlorocruoroporphyrin, corresponding to the chlorocruorin oxygen-binding site. One of the vinyl groups (CH CH2) of O). With kind permission by La Recherche. molecule (a) takes over from a formyl group (CH polypeptide chains possessed a heme group (Vinogradov, Kapp, and Ohtsuki, 1982; Vinogradov, 1985a; Vinogradov, 1985b). 16.3 Architecture Interest in the global structure of these molecules first emerged during the 1960s, some 30 years after the molecular weights of the pigments had been determined. The initial studies involved observations using transmission electron microscopy (TEM), and the first micrographs were obtained from Arenicola marina (Roche, Bessis, and Thiery, 1960a; Roche, Bessis, and Thiery, 1960b). The images revealed hexagonal structures with diameters of 22–26 nm, where each molecule was constituted by two superimposed hexagons with a height of 11–17 nm (Levin, 1963; Roche, 1965). This structure was typically referred to as a hexagonal-bilayer (HBL). Each hexagon was composed of an assembly of six elements with a water-drop shape (Kapp and Crewe, 1984; Van Bruggen and Weber, 1974), and were also referred to as having a hollow globular structure (HGS) (De Haas et al., 1996a, 1996b, 1996c, 1996d) or one-twelfth. The molecule was built up by 12 of these subunits, each of molecular weight ca. 250 kDa, being association one with another. Subsequently, these observations were extended to other molecules belonging to other annelid species, and revealed compounds of similar dimensions (Table 16.2). Table 16.2 Dimension of several extracellular hemoglobins measured from TEM images. Species High (nm) Polycheta Nephthyidae Nephtys incisa Nereidae Tylorrynchus heterochaetus 19.8 1.2 Perinereis aibuhitensis Arenicolidae Arenicola marina Abarenicola affinis Opheliidae Euzonus mucronata Ophelia bicornis Travisia japonica Eophilia tellinii Eunicidae Eunice aphroditois a (nm)a) 18.2 19.2 1.2 20.0 1.8 7.5 0.8 16.0 0.8 16.0 14.8 19.7 17.0 25.5 0.8 24.0 20 27.5 25.5 17.0 17.5 16.0 19.0 25.5 26.0 23.5 28.0 17.9 0.3 26.3 0.3 b (nm)b) Stainingc) References 31.6 1.1 AU Messerschmidt et al., 1983 28.4 30.1 0.8 29.4 0.8 30.0 30.4 28.4 30.0 27.5 Suzuki, Kapp, and Gotoh, 1988 Kapp et al., 1982 Matsubara et al., 1996 PT PT PT AU PT Levin, 1963 Roche, 1965 Breton-Gorius, 1963 Toulmond et al., 1990 Chung and Ellerton, 1982 MA, PT AU PT AU Terwilliger et al., 1977 Mezzasalma et al., 1985 Fushitani et al., 1982 Cejka et al., 1989 AU Bannister, Bannister, and Anastasi, 1976 CH16 01/30/2014 0:7:32 Page 365 16.3 Architecture Cirratulidae Cirriformia sp. Terrebelidae Pista pacifica Thelepus crispus Ampharetidae Amphitrite ornata 17.0 24.0 AU Van Gelderen, Shlom, and Vinogradov, 1981 17.0 0.3 17.0 0.3 25.0 0.5 25.0 0.5 MA, PT MA, PT Terwilliger and Koppenheffer, 1973 Terwilliger and Koppenheffer, 1973 10.5 21.8 29.0 PT AU Mangum, 1976 Chiancone et al., 1980 30.4 MA, PT AU Terwilliger and Terwilliger, 1984 Toulmond et al., 1990 AU St€ockel, Mayer, and Keller, 1973 Kapp and Crewe, 1984 Alvinellidae Alvinella pompejana 19.7 24.5 27.0 21.1 16.0 31.2 Oligocheta Tubificidae Tubifex tubifex Lumbricidae Lumbricus terrestris Eisenia fetida Limnodrilus gotoi Maoridrilus montanus Megascolecidae Pheretima communis Pheretima hilgendorfi Acheta Hirudidae Haemopis sanguisuga j 365 20.0 16.0 0.7 16.0 23.7 20.0 0.9 21.5 17.5 16.5 14.0 16.0 0.7 30.0 26.5 0.0 26.5 16.7 16.7 15.2 1.4 26.0 AU AU PT PT AU PT Levin, 1963 Levin, 1963 Roche, 1965 Ben Shaul, 1974 Kapp et al., 1982 Kapp and Crewe, 1984 Frossard, 1982 Frossard, 1982 Ochiai and Enoki, 1981 Yamagishi et al., 1966 Ellerton, Bearman, and Loong, 1987 26.0 26.0 PT PT Ochiai and Enoki, 1979 Ochiai and Enoki, 1979 24.4 2 AU Wood, Mosby, and Robinson, 1976 28.2 0.8 31.3 26.0 26.0 25.0 22 1.2 25.0 37.0 29.9 0.8 AU PT PT AU a) Distance between two parallel sides. b) Maximal molecule diameter. c) AU ¼ uranyl acetate; PT ¼phosphotungstate, MA ¼ ammonium molybdate. The hexagon center is generally devoid of subunits and was constituted by a hole of about 7–8 nm diameter; however, some annelid EHbs were shown to possess a central subunit, such as Oenone fulgida (Van Bruggen and Weber, 1974), Nepthys hombergii (Wells and Dales, 1976), Nepthys incisa (Wells and Dales, 1976; Messerschmidt et al., 1983; Vinogradov and Kapp, 1983), Ophelia bicornis (Ghiretti-Magaldi et al., 1985; Mezzasalma et al., 1985; Cejka et al., 1991, 1992), Maoridrilus montanus (Ellerton et al., 1987), Glossoscolex paulistus (El Idrissi Slitine, Torriani, and Vachette, 1990), Eophila tellinii (Cejka et al., 1989), Euzonus mucronata (Terwilliger et al., 1977b), and Arenicola marina (Zal et al., 1997a, 1997b) (Figure 16.3). The existence of a central subunit suggested that this was similar or equivalent to another one-twelfth of the native molecule, although to date no central subunit has been isolated and/or characterized. GhirettiMagaldi et al. (1985) also postulated that the subunit for Ophelia bicornis would differ from the other one-twelfth, while Messerschmidt et al. (1983) proposed that the central subunit for Nephtys incisa was too small to correspond to one-twelfth of the native molecule. Figure 16.3 Three-dimensional cryomicroscopic structure of Arenicola marina EHb. Ludovic Jouan, 2003. CH16 01/30/2014 366 j 0:7:33 Page 366 16 Extracellular Hemoglobins from Annelids, and their Potential Use in Biotechnology The use of TEM revealed a symmetric structure, and consequently several quaternary structure models were proposed. However, in order to construct an accurate model, knowledge is required of three parameters: (i) the molecular weight of the biopolymer in its native condition; (ii) the number and relative amounts of subunits and polypeptide chains that constituted the molecule; and (iii) the accurate molecular weight of each component. Access to these parameters was gradually achieved due to the emergence of new technologies such as mass spectrometry and multiangle light-scattering, which were first applied by one of the present chapter authors (F.Z.). A sixfold axis of symmetry was identified by using X-ray diffraction with a resolution of 6 A (Royer and Hendrickson, 1988), although the existence of minor components was suggested without this symmetry. The same observation was made several years later by Boekema and van Heel (1989), when using electron microscopy with a resolution of 20 A. An analysis using small-angle X-ray scattering of Lumbricus terrestris EHb – the most extensively studied molecule – revealed the presence of a central subunit that was not visible with TEM (Pilz, Schwarz, and Vinogradov, 1980), in contrast to Tylorrynchus heterochaetus where the subunit was visible (Pilz et al., 1988). The same conclusion was drawn in the case of Arenicola marina and Glossoscolex paulistus EHbs (Wilhelm, Pilz, and Vinogradov, 1980; El Idrissi Slitine, Torriani, and Vachette, 1990). A threedimensional reconstruction of Lumbricus EHb confirmed these results when using scanning transmission electron microscopy (STEM), and suggested that the mass could correspond to onetwelfth at the molecule center (Crewe, Crewe, and Kapp, 1984). Alternatively, Vinogradov et al. (1986) suggested that the mass could correspond to the linker chains. The same observation was made via a three-dimensional reconstruction of the molecule by cryomicroscopy (Schatz et al., 1995; Taveau et al., 1999), but these authors suggested that only immunolabeling could confirm the exact nature of the central subunit. The major conclusions deduced by Schatz et al. (1995) were the presence of a sixfold axis of symmetry, in agreement with Royer and Hendrickson (1988), and a threefold axis of symmetry at the one-twelfth level. The latter level of symmetry was also confirmed by Martin et al. (1996a) after crystallization and observa tion of the subunit at 2.9 A resolution. 16.4 Model of Quaternary Structures Molecular weight determinations using the primary sequence permitted the realization of several models of quaternary structure for these EHbs. However, several approaches were employed to understand the different component assemblages inside the biopolymers (Table 16.3). 16.4.1 Electron Microscopy Based on TEM images which showed molecular symmetry, Rossi-Fanelli et al. (1970) proposed a model for Lumbricus terrestris EHb (Figure 16.4). This model was inspired by the Figure 16.4 First quaternary structure model proposed for Lumbricus terrestris extracellular haemoglobin. Reused from Rossi-Fanelli et al., 1970 with kind permission from Elsevier. Table 16.3 Main structural models proposed in the literature for the extracellular hemoglobins of annelids and Vestimentifera. Species No. of globin chains No. of linker chains Methods Assembly for the one-twelftha) References Tylorrynchus heterochaetus Tylorrynchus heterochaetus Perinereis aibuhitensis Arenicola marina Lumbricus terrestris Lumbricus terrestris Lumbricus terrestris Macrobdella decora Alvinella pompejana Alvinella pompejana Riftia pachyptila 192 144 192 156 192 144 144 144 144 120 144 24 36 24 42 24 36 36 42 60 72 36 HPLC ESI-MS HPLC ESI-MS HPLC HPLC ESI-MS ESI-MS ESI-MS ESI-MS ESI-MS (T þ M)4 þ L2 (T þ M)3 þ L3 (T þ M)4 þ L2 (T þ M9) þ L3.5 (T þ M)4 þ L2 (T þ M)3 þ L3 (T þ M)3 þ L3 (D þ M2)3 þ L3.5 (T þ M)3 þ L5 (T þ M2)2 þ L6 (D þ M)4 þ L3 Suzuki et al., 1990a Green et al., 1995 Matsubara et al., 1996 Zal et al., 1997a Ownby et al., 1993 Vinogradov et al., 1991 Martin et al., 1996b Weber et al., 1995 Zal et al., 1997b Zal et al., 1997b Zal et al., 1996a a) M ¼ monomeric globin chain; D ¼ covalent dimer of globin chains; T ¼covalent trimer of globin chains; L ¼ linkers chains. CH16 01/30/2014 0:7:33 Page 367 16.4 Model of Quaternary Structures j 367 Figure 16.5 Proposed model for Lumbricus terrestris extracellular hemoglobin using transmission electron microscopy. (a) Face view; (b) Internal bracelet constituted by D1 (central ring) and D2 (external ring) subunits, where the twelfths of the molecule were fixed. With Courtesy by J.C. Taveau, 1991. findings of Guerritore et al. (1965), who were first to establish a structure of chlorocruorine from Spirographis. In this model, the polymer was constituted by an HBL structure with a maximum diameter of 26.5 nm, where each hexagon was composed of six identical triangular subunits (A in Figure 16.4), located at each corner. Each of the subunits was built from three smaller subunits (B in Figure 16.4), assembled in a triangle. The molecular weights were estimated as 270 kDa for A and 92 kDa for B. The model proposed for the Lumbricus terrestris EHb by Vinogradov et al. (1986) is known as the “bracelet model,” and is constituted by the assembly of monomers M and trimers T with Mr-values of 16 and 50 kDa, respectively. The cohesion of this structure was produced by a central ring constituted by two other dimeric subunits that were devoid of heme, D1 and D2, with Mr-values of 31 and 37 kDa, respectively. The assembly of these subunits was modeled by Taveau (1991), based on TEM images (Figure 16.5). 16.4.2 Estimation of Heme Number and Minimal Molecular Weight The minimal molecular weight of the native EHb, using either the heme or the number of iron atoms, revealed a value of about one mole of heme per 27 000 Da of protein. This value was higher than for the smaller subunit found on EHb, determined either by electrophoresis or by using the primary sequences. These observations confirmed that not all of the polypeptide chains possessed a heme group, in contrast to vertebrate Hbs. The mean mass of 27 000 Da corresponded to one heme for about 1.5–2 globin chains. Waxman (1971) suggested a model for the EHb of Arenicola cristata in which two polypeptide chains of the three would be able to bind a heme group. Some years later, Hendrickson and Royer (1986) proposed a unique model for EHb molecules, based on similar aspects of TEM images. In the latter model the molecule was proposed to have been built by the assembly of three different chains, of which two (a and b) would contain a heme group, in agreement with the findings of Waxman Figure 16.6 Proposed model for all annelid hexagonal-bilayer hemoglobin. (a) Trion constituted by three polypeptide chains, two with the similar tertiary structure of the myoglobin (a and b) and one chain different (c); (b) Hexatrion built by the association of six trions; (c,d) Localization of these chains on the whole hexagonal-bilayer hemoglobin (c, profile view; d, face view). Reused from (Hendrickson, 1983) with kind permission from Elsevier. (1971). The molecule would be characterized by the same folding as Mb but with the third (c) chain being different. The three chains would be associated in trimer or “trion” fashion, with six trions associated to a “hexatrion,” which itself would be associated by 12 to create the EHb molecule (Figure 16.6). This model described a biopolymer with Mr 3880 kDa, constructed from an association of 216 chains of which 144 would possess heme. The deficiency in the stoichiometry of one mole of heme per polypeptide chain proved to be a major result, and allowed an understanding of the quaternary structure of these huge molecules. However, the scientific community found this result very difficult to accept, and both Antonini and Chiancone (1977) and Garlick (1980) concluded that these results may have been due to purification artifacts. Subsequently, the absence of stoichiometry was admitted without real proof, although Fushitani et al. (1982a) rejected this hypothesis using high-performance liquid chromatography (HPLC). In fact, these authors showed that the polychete EHb from Travisia japonica was assembled from five components with Mr-values ranging between 14 and 18 kDa, each of which contained one heme, although the minimal molecular weight was about 23 000 Da (Fushitani et al., 1982a; Fushitani et al., 1982b; Fushitani, Morimoto, and Ochi, 1983) (Table 16.4). When Suzuki et al. (1983) were able to isolate (by HPLC) only six heme-components from the EHb of Perinereis brevicirris, their result was in agreement with that of Fushitani et al. (1982a). Subsequently, all of these results were challenged, and following the determination of the primary sequences of three globin chains involved in the trimer subunit of Lumbricus EHb, Fushitani and Riggs (1988) recalculated the heme CH16 01/30/2014 368 j 0:7:33 Page 368 16 Extracellular Hemoglobins from Annelids, and their Potential Use in Biotechnology Table 16.4 Minimum molecular weight (Da) obtained by iron or heme content, or by electrophoresis (SDS–PAGE). Minimal Mr Species Polycheta Nephtys incise Tylorrhynchus heterochaetus Perinereis cultifera Arenicola marina Arenicola cristata Abarenicola affinis Abarenicola pacifica Euzonus mucronata Travisia japonica Travisia fetida Eunice aphroditois Marphysa sanguinea Pista pacifica Thelepus crispus Alvinella pompejana Oligochaeta Tubifex tubifex Glossoscolex paulistus Lumbricus terrestris Maoridrilus montanus Eisenia fetida Pheretima communissima Acheta Haemopis grandis Haemopis sanguisuga Dina dubia ND ¼ not determined. Fe or Heme SDS–PAGE 22 400 26 500 23 700 23 613 26 100 23 525 24 700 23 370 23 000 23 400 26 700 27 589 24 454 23 400 11 000 12 000 13 000 14 000 13 000 13 700 15 800 12 500 14 000 14 600 14 600 14 000 15 000 15 000 13 900 21 000 25 250 24 500 23 900 24 700 25 430 13 000 ND 12 400 13 500 14 800 14 500 24 000 24 800 21 200 13 000 12 600 12 000 percentage. Their results suggested that all three chains possessed heme and a proportion of about 32.5 kDa of protein without heme per one-twelfth of the molecule that remained (Fushitani and Riggs, 1988). Using the HPLC data, Gotoh and Suzuki (1990) proposed a quaternary model for Tylorrynchus heterochaetus EHb which, according to these results, would consist of an assembly of four globin chains. This model described a molecule built by assembling 192 globin chains. Later, Suzuki et al. (1990a) sequenced two linker chains without heme from the Tylorrynchus EHb, and confirmed that not all polypeptide chains in EHb would contain a heme group, thus rejecting in facto their previous model. 16.4.3 Small-Angle Light Scattering The model proposed by El Idrissi Slitine (1991) for Arenicola marina was obtained by the assembly of 186 basic spherical units of 21 A radius. This radius was calculated as being the distance between the next two spherical units, and was inferior to the units’ own diameter. This model was based on three different levels: (i) a “peripheral structure” made from 14 elemental spheres set out in three stairs (4/6/4); (ii) a “central structure” formed by six spheres arranged in this way (1/4/1); and (iii) a “contact structure” constituted by two spheres, which occupied the free space between the peripheral and central structures (Figure 16.7). This model described a molecule built by the assembly of 12 “peripheral structures” linked together by 12 “contact structures”; this assemblage surrounded a protein material, the density of which could not be attributed exactly to a complete one-twelfth (El Idrissi Slitine, Torriani, and Vachette, 1990). This model described Figure 16.7 Model proposed for the extracellular hemoglobin from Arenicola marina, based on small-angle X-ray scattering data. P ¼ peripheral structure; C ¼ central structure; L ¼ contact structure. Courtesy of Fouzia El Idrissi Slitine, 1991. CH16 01/30/2014 0:7:34 Page 369 16.4 Model of Quaternary Structures a molecule of 168 chains, of which 144 globin chains and 24 linker chains were devoid of heme. 16.4.4 Low- and High-Pressure Liquid Chromatography and SDS–PAGE To date, the details of two major quaternary models for Lumbricus terrestris EHb have been reported. For both models, each twelfth is constituted only by the globin chain, and the twelfths were tied together by the intermediate of linker chains that possessed no or little heme. The first of these models was proposed by Vinogradov et al. (1986), and described a molecule assembled from 12 subunits (“dodecamers”) and constituted 12 globin chains (Vinogradov et al., 1991; Sharma et al., 1996). The molecule was composed of 144 globin chains, associated with 36 linker chains. Although, the names of the different components have changed with time, at this point the first nomenclature will be used. For Vinogradov’s model, a monomer M (i.e., d) with a Mr of 16 750 Da possessing a heme group was associated with a trimer subunit T (i.e., a, b, c) with a Mr of about 50 000 Da; together, this complex constituted a tetramer. The trimer complex constituted the covalent assembly of three globin chains with Mr about 16 000 Da, and hence each twelfth or dodecamer was constituted by the assembly of three tetramers (3 (M þ T)). These twelfths were tied together in the native molecule by two different monomers D1 and D2 of Mr about 31 and 32 kDa, respectively. D1 and D2 were suspected of being devoid of heme, and to have a protein bracelet at the molecule centers. The bracelet model was based on TEM images as well as dissociation–reassociation experiments (Kapp et al., 1984, 1987; Mainwaring et al., 1986; Vinogradov, 1986; Vinogradov et al., 1986), and contained 200 polypeptide chains with a global Mr of 3800 kDa. In addition, the model could explain the heterogeneity of the results observed with SDS–PAGE, as the molecule could be cleaved randomly at different levels (Figure 16.8). The second model proposed for Lumbricus terrestris was built by assembling 192 globin chains (i.e., a, b, c, d) and 24 linker chains (i.e., three majors L1, L2 and L3 and one minor L4) (Fushitani and Riggs, 1988; Ownby et al., 1993; Zhu et al., 1996). For this model, each twelfth would be constituted by a dimer of tetramer [(a,b,c,d)2] that would be able to dimerize to create a tetramer of [(a,b,c,d)4]. The molecule would be constituted in the following way: [(a,b,c,d)4,L2] 12, where a, b, c and d corresponded to globin chains, and L to linker chains. This conceptual model would have a Mr of 3800 kDa, as for the bracelet model (Fushitani and Riggs, 1988; Riggs, 1990). 16.4.5 Electrospray Ionization-Mass Spectrometry A more accurate technique, electrospray ionization-mass spectrometry (ESI-MS), was successfully applied to some HBL Hbs, allowing the determination of their complete polypeptide chain composition. The EHbs examined were from Macrobdella decora (Weber et al., 1995), Tylorrynchus heterochaetus (Green et al., 1995), Lumbricus terrestris (Martin et al., 1996b), Riftia pachyptila (Zal et al., 1996a), and Arenicola marina (Zal et al., 1997a, 1997b). The models of these molecules, obtained by ESI-MS, were compared to those obtained with HPLC in Table 16.3. The model obtained for Arenicola marina EHb HBL, using ESIMS data, is shown in Figure 16.9. The one-twelfth protomer would be constituted by the following assembly [(3a1)(3a2)2T], where T corresponds to either T3, T4, or T5. T1 and T2 were probably located at the molecule center, as noted in previous studies. (a) (b) T3 T5 T4 T T T4 T5 T3 Figure 16.8 Cleavage possibility of the extracellular hemoglobin from Lumbricus terrestris, according to the bracelet model proposed by Vinogradov et al. (1986). This scheme explains the heterogeneity of SDS– PAGE results. (a) Face view (T ¼ trimer; M ¼ monomer; D1 (V) and D2 (VI) ¼ linker chains; (b) Profile view. V and VI correspond with the first nomenclature used to name these chains. Courtesy of S. Vinogradov. j 369 a2 a2 a1 a1 a1 T a2 a2 a2 a2 Figure 16.9 Model of Arenicola marina HBL Hb, adapted from Waxman (1971). (a) Drawing of typical HBL Hb, top view. Each one-twelfth is constituted by one trimer (T2, T3 and T4), as noted by Waxman (1971), with nine monomeric chains. The two trimers (T), for example, T1 and T1 or T1 and T2 at the center of the HBL structure, are represented as viewed on the TEM image; (b) Detail of a one-twelfth, showing the arrangement of monomeric chains (Zal et al., 1997a). CH16 01/30/2014 370 j 0:7:34 Page 370 16 Extracellular Hemoglobins from Annelids, and their Potential Use in Biotechnology 16.5 Biotechnology Applications 16.6 Organ Preservation As noted briefly above, many research groups worldwide have investigated the annelid EHb, demonstrating the great interest in this molecule among the international scientific community. Among these groups, the more active in the field in France was led by Prof. Andre Toulmond and was located initially in Paris on the University Paris VI campus (Pierre-etMarie-Curie University). In 1993, this laboratory moved to the Marine Biological Station Roscoff (Finistere, France), and Prof. Toulmond became the Director of this very old and famous center (founded in 1872 by Prof. Henri de LacazeDuthiers, at the Sorbonne University), between 1993 and 2003. Franck Zal, a PhD student of Andre Toulmond, began to work on Arenicola marina in 1993, and described in detail the structure of several EHbs. Zal discovered that the Hb molecule of Arenicola marina (HbAm) had all the characteristics of a “universal oxygen carrier” that medics had been seeking for several decades for therapeutic applications. HbAm has exceptional properties: In 2005, almost 93 000 organ transplants were conducted worldwide, and the number of transplants is growing each year by 5%. For example, 25 000 transplants were conducted in the US alone in 2003. In France, the annual number of transplants is constantly growing, having risen from 3115 in 1998 to 4946 in 2011. During the latter year about 300 people died in France due to a lack of transplants, whilst in 2012 some 10 400 patients were awaiting transplant. The success of organ transplantation has resulted in a rapid increase in the discrepancy between the number of patients waiting to be transplanted and the number of transplants available. The available solutions include splitting an organ between several receivers (e.g., liver), xenotransplantation (using organs from animals, mostly cardiac valves or islets of Langerhans from pigs), or the culture of organs from stem cells. Unfortunately, as these solutions are only at the exploratory stages, a much better solution might be to extend the duration of organ preservation after collection from a cadaver, by using hypothermic continuous reperfusion so as to minimize organ loss. The main objective of organ preservation is to extend the period of ex vivo viability of an organ, allowing for its transfer from the removal center to the transplant center. Under classical static organ conservation conditions, the conservation times possible before ischemia sets in differ widely and depend on the organ concerned. For example, the kidney, heart, liver, lungs and pancreas are very sensitive to cold ischemia. The limited life span of transplants is due to deleterious effects induced by interruption of the blood circulation (ischemia) which, at 37 C, causes a rapid cellular necrosis of the removed organ. Ischemia can be retarded by refrigerating the organ, as a decrease in temperature causes a decline in cellular energy requirements (the O2 requirement at 5 C is only 5% of that at 37 C). Ischemia in hypothermia (cold ischemia) starts as soon as the washed organ is refrigerated, and continues until it is reperfused in the recipient. Cooling does not completely stop cellular metabolism, but does slow down the speed of enzymatic reactions and delays cellular death. However, the use of cold ischemia is time-limited, as the absence of a sufficient supply of O2 causes a metabolic shift towards anaerobic glycolysis. This leads to the generation of lactic acid with cellular acidification from the rupture of lysosomal membranes and cellular destruction by the liberated proteolytic enzymes. The results is an accumulation of various toxins, including cytotoxic free radicals, that are passed to the receiver during organ reperfusion. It is naturally extracellular and polymerized. Its molecular weight is 50-fold that of human Hb. It has functional O2-binding and -liberating properties similar to those of human Hb (HbA inside the red blood cell). Each HbAm molecule can bind 156 molecules of oxygen, compared to four in the case of human HbA It has naturally antioxidative properties. Historically, and before this discovery, two approaches had been investigated to develop universal oxygen carriers: (i) a chemical method using perfluorocarbons; and (ii) biological methods using human or bovine Hb (Ketcham and Cairns, 1999; Gulati, Barve, and Sen, 1999; Winslow, 2000. In March 2007, Dr Franck Zal and Dr Morgane Rousselot created the French biotechnology company, HEMARINA, in order to develop and promote the molecule HbAm, which was seen to possess all of the characteristics necessary to become the leading third-generation blood substitute. In addition to the data outlined above, the principal characteristics of HbAm are that: The functional properties are totally independent of secondary molecules, such as 2,3-DPG. The molecule functions without any chemical modification, and with no additional treatment. The molecule has a functional capability at temperatures between 4 C and >30 C, which is a major and essential advantage. The absence of any vasoconstrictor effects is in contrast to all other products developed to date and referred to as hemoglobin oxygen carriers (HBOCs) (Tsai et al., 2012). Although several major applications for HbAm have already been identified, attention here will be focused on only two, namely organ preservation pending transplantation and the development of an innovative oxygen carrier. 16.6.1 Preservation Solutions The deleterious effects of cold ischemia can be attenuated through the use of preservation solutions, which allow the reduction of cellular edema by maintaining the extracellular osmotic pressure, thus preventing intracellular acidosis and reducing reperfusion injuries due to free radical accumulation. CH16 01/30/2014 0:7:34 Page 371 16.7 Anemia Some years ago, the ANSM (Agence National de Securite du Medicament) questioned the efficiency of organ preservation solutions. 16.6.2 Hypothermic Continuous Reperfusion In general, following its removal a transplant can be conserved by simple immersion in a preservation solution at 4 C. This static technique is simple and inexpensive; however, due to the urgency of the situation related to lack of organs and to the degree of ischemia of organs currently being transplanted, a hypothermic continuous reperfusion technique has been developed. This dynamic technique, which is presently being applied to kidney transplants, requires sophisticated and expensive equipment. Currently, two main dynamic systems have been developed, the performances of which are similar. Unfortunately, the use of perfusion equipment is limited to a small number of centers in Europe, and the preliminary results do not indicate a significantly better performance than static methods. Because it is functional in the natural environment at low temperature, HbAm was manufactured by HEMARINA as the product HEMO2life1 which, when added to several clinical storage media, insured oxygenation of the organs. The recovery of organ grafts maintained in media with HEMO2life1 and then transplanted into pig models was shown to be excellent (Figure 16.10). HEMO2life1 is currently at the final stage of registration, with efficiency having already been demonstrated for kidney, lung, and heart. HEMO2life1 also possesses naturally an intrinsic superoxide dismutase (SOD) activity on HbAm, which allows it to protect the cells against oxidative damage caused by an accumulation of free radicals liberated during cold ischemia. HEMO2life1 could also increase the efficiency of dynamic systems for the conservation of kidneys, and probably also for other organs with shorter preservation times (e.g., heart, liver, pancreas, lung). j 371 16.7 Anemia According to a World Health Organization reports, one in ten people admitted to hospital requires a blood transfusion. The majority of these cases are anemia, due to a decrease in Hb levels following the loss or reduced production of red blood cells (RBCs). A loss of RBCs may be due to hemorrhage during a trauma (accidents, injuries, burns) or during surgery (coronary artery bypass, organ transplants, hip replacement, etc.). Anemia can also be caused by hemolytic anemia (e.g., drepanocytosis). A reduced RBC production may occur in cases of global medullary insufficiency and bone marrow cancer, as well as being a side effect of radiotherapy or chemotherapy. The aim of transfusing RBC concentrates is to maintain or to restore a sufficient level of Hb. Typically, 50% of all RBCs are transfused to patients aged >65 years, and demographics show that, in developed countries, this age category will double over the next 30 years. Certain types of surgery that are becoming increasingly common require an essential number of RBCs (e.g., up to 100 RBC units for one liver transplantation). Moreover, these trends are also observed in emerging countries (India, China, Brazil), and it is agreed that worldwide RBC demands to treat anemia will continue to increase. As an example, in 2009 the number of RBCs transfused was about 93 million units, which represents an increase of 33% compared to 2003. Moreover, this situation is not expected to improve with demands continuing to increase, especially when associated with a stagnation or even regression in donations. Today, the exclusion criteria for donors are expanding due to emergent risks relating to transfusions (Nile virus, severe acute respiratory syndrome, prions, chikungunya virus, etc.), and this is causing a regression in the number of regular donors. Experts in the field maintain that the shortage in blood products worldwide is 100 million liters per year, and these requirements are constantly increasing. Figure 16.10 Kidney function following reperfusion. Porcine kidneys were cold-flushed and preserved for 24 h with UW or HTK supplemented with M101 at a concentration of 0 g l1 (UW and HTK groups) or 5 g l1 (UW þ M101 and HTK þ M101 groups). Follow-up was performed on the day before transplantation (D-1) and after transplantation (at 1 h ¼ R60; from day 1 to day 14 ¼ D1 to D14; and 1 month ¼ M1). Values shown are mean SEM., p <0.05 versus UW; y, p <0.05 versus HTK; n ¼ 5. UW ¼ University of Wisconsin organ preservation solution, patented by the university (also called VIASPAN); HTK ¼ Histidine-tryptophan-ketoglutarate organ preservation solution (also called Custodiol); M101 ¼ Molecule 101, the development name given by HEMARINA to the hemoglobin of Arenicola marina. CH16 01/30/2014 372 j 0:7:34 Page 372 16 Extracellular Hemoglobins from Annelids, and their Potential Use in Biotechnology 16.7.1 Hemoglobin Oxygen Carriers Initially, HBOCs were developed in response to this blood shortage. The short half-life of HBOCs (ranging from several hours to 2–3 days) compared to RBCs (120 days) means that they are only suitable for use in acute anemia (programmed surgery, traumatology), though these represent 60% of current prescriptions for RBCs. Today, experts estimate that oxygen transporters will not replace RBCs from donors for the treatment of anemia. In the case of HBOCs, this is due to the very large amounts of active material that must be produced, the limited sources of raw materials, and the costs related to chemical modifications. Perfluorinated compounds (PFCs) are limited in their therapeutic applications, as only small quantities can be used because of their high retention, and the need for concomitant use of an oxygen mask. Nevertheless, HBOCs can represent an additional therapy for certain applications, notably normovolemic hemodilution and emergencies relating to hemorrhagic shocks. 16.7.2 Normovolemic Hemodilution Normovolemic hemodilution has been recommended for decades. The principle is simple: blood is taken from the patient who will undergo surgery and replaced by filling liquids (colloids and crystalloids) in order to maintain the intravascular volume. After surgery, the blood that had been removed is re-transfused to the patient. Dilution of the circulating blood reduces the number of RBCs lost by hemorrhage during the intervention, which in turn reduces the need for homologous transfusions postoperatively. This has a double advantage, in that homologous RBC stocks are saved, and there is an avoidance of exposure to homologous blood, which carries a sizeable residual risk. In France today, three accidents occur for every 1000 homologous transfusions. These problems occur mainly due to blood typing errors (donor or receiver) or to sanitary issues (bacteria or viruses below detection levels during tests). Available data on normovolemic hemodilution show, however, that the objective targeted by this strategy (a reduction in homologous blood use) is rarely attained under most surgical conditions. The mathematical modeling of normovolemic hemodilution indicates that the chances of reaching this goal are much higher if the volume of blood removed is high before preoperative blood losses. However, in practice this theoretically optimal hemodilution is rarely achieved because of issues relating to individual tolerance levels of patients. 16.7.2.1 HEMOXYCarrier® HEMARINA is currently developing a product called HEMOXYCarrier1, which contains HbAm, for such applications. The coadministration of HEMOXYCarrier1 with filling liquids would allow a greater degree of hemodilution in order to obtain a higher efficiency of this practice. HEMOXYCarrier1, which is highly soluble and stable when diluted, should temporarily mediate the lack of oxygen inherent in the simple use of a filling solution. Anemia can be caused by intense and brutal bleeding after a trauma, typically accidents, gunshot wounds or rupture of the vascular system (aneurysm). The tolerance of certain vital organs (brain, heart) to a massive reduction in O2 supply is weak. Trauma situations generally occur outside hospitals and are managed by mobile emergency units, and often the blood group of the victim is not known. The stocks of O blood (universal donor) carried by emergency vehicles are insufficient to compensate for important losses and, in the worst cases, only filling solutions are used. In this situation, emergency units require a product that is compatible with all blood groups, and easy to store and use. This type of product would be of special interest for the treatment of victims of natural catastrophes and of war casualties. The intravenous administration of HEMOXYCarrier1 permitted a rapid, efficient and simple restoration of the oxygenation capacity affected during massive blood loss in an animal model, without any side effects (Rousselot et al., 2006; Tsai et al., 2012). This molecule is stable at ambient temperature and can also be lyophilized. Moreover, its properties would allow mobile emergency units to dispose of sufficient products to meet important and unpredictable demands. Preclinical studies performed on rodents have shown that the systemic injection of this molecule does not generate immunogenicity and allergic reactions, and does not provoke any vasoconstrictive effects. It has been possible to directly visualize the efficiency of the molecule on hypoxic tissues immediately after systemic perfusion (Rousselot et al., 2006; Tsai et al., 2012; T. Le Gall et al., unpublished results). 16.8 Conclusion To summarize, as opposed to the development of first- and second-generation HBOCs that modify intracellular hemoglobin (human or bovine) in order to function extracellularly, a natural extracellular hemoglobin from the invertebrate Arenicola marina (HbAm) was used. This circulatory pigment, which is present in the blood vessels of the invertebrate, has evolved over millions of years and is able to function extracellularly. It was shown, using vertebrate animal models, that this molecule does not induce vasoconstriction, which was the major secondary effect of the last generation of HBOCs. As a consequence, HbAm can be considered a lead molecule for the future development of an oxygen carrier for ischemia or anemia applications. In this respect, two products are currently under development by the HEMARINA company, namely HEMO2life1 for organ preservation, and HEMOXYCarrier1 as a universal oxygen carrier. 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(1996) Stoichiometry of subunits and heme content of hemoglobin from the earthworm Lumbricus terrestris. J. Biol. Chem., 271, 29999–30006. About the Authors Franck Zal is the cofounder of HEMARINA and recognized internationally for his studies in the field of the respiratory pigments of invertebrates. He received his PhD degree with honors in oceanography in 1996 from the University of Paris VI (Pierre-et-Marie-Curie), where his doctoral research focused on the structure–function relationships of the annelid extracellular hemoglobin. He then spent three years abroad as part of a post-doctoral program, two years at the University of Santa Barbara in California (USA), and one year at the University of Antwerp (Belgium). For his work, he received in 2001 the CH16 01/30/2014 376 j 0:7:35 Page 376 16 Extracellular Hemoglobins from Annelids, and their Potential Use in Biotechnology bronze medal of CNRS (French National Research Center). Dr Zal is the author of over 70 publications in international peer-reviewed scientific journals, the author of ten patents, and has made presentations at over 100 international scientific meetings. He was also the head of an academic research group working on marine ecophysiology at a marine station in Brittany, CNRS-UPMC. In 2007, he decided to create HEMARINA, a marine biotechnology start-up located in Morlaix (Finistere, France). The Capital Magazine identified this company in France as the most promising biotechnology company. HEMARINA won almost all prizes for innovative enterprise in France, and especially the great prize of the Senat in France in 2007. Franck is also the cofounder of the Enterprise club Bretagne Biosciences and was vice-president of France Biotech. Morgane Rousselot PhD is cofounder of HEMARINA, and in charge of the operational aspects of Hemarina research and development programs. In 2001, she was employed for a year in the Research and Development Analytical Chemistry Department of GlaxoSmithKline in the UK. In 2002, she obtained a degree in Chemical Engineering (Dipl^ ome d’Ingenieur) at ENSCMu (Ecole Nationale Superieure de Chimie de Mulhouse) with qualifications in Chemistry-Biology-Healthcare. During the same year she obtained her master’s degree in Interface Chemistry-Biology and molecular modeling. She received her PhD with honors in biochemistry in 2006 from the University of Paris VI (performed at the Station Biologique of Roscoff), where her doctoral research focused on the properties of Arenicola marina hemoglobin (HbAm) and its potential use as a blood substitute. In 2006, she obtained a grant “Jeune Createur d’Entreprise” delivered by Bretagne Innovation in order to create the Biotechnology society Hemarina. She possesses strong expertise in analytical chemistry and structural biology). Dr Rousselot is the author of eight publications in international peer-reviewed scientific journals, the author of four patents, and has made presentations at over 10 international meetings. India Contact: Life Technologies (India) Pvt. Ltd. 306, Aggarwal City Mall, Opposite M2K Pitampura, Delhi – 110034 (INDIA). Ph: +91-11-42208000, 42208111 Mobile: +91-9810521400, Fax: +91-11-42208444 Email: [email protected] Website: www.lifetechindia.com
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