Journal of Biotechnology 139 (2009) 102–107 Contents lists available at ScienceDirect Journal of Biotechnology journal homepage: www.elsevier.com/locate/jbiotec Nanoparticle-supported multi-enzyme biocatalysis with in situ cofactor regeneration Wenfang Liu a,b , Songping Zhang a , Ping Wang c,∗ a National Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of Sciences, Beijing 100080, China School of Chemical Engineering and Environment, Beijing Institute of Technology, Beijing 100081, China c Department of Bioproducts and Biosystems Engineering and Biotechnology Institute, University of Minnesota, 2004 Folwell Ave., 208 Kaufert Lab, St. Paul, MN 55108, United States b a r t i c l e i n f o Article history: Received 17 March 2008 Received in revised form 29 September 2008 Accepted 29 September 2008 Keywords: Nanoparticles Enzyme immobilization Multi-enzyme biotransformation Cofactor regeneration Bioprocessing Biosynthesis a b s t r a c t Although there have been a long history of studying and using immobilized enzymes, little has been reported regarding the nature of immobilized cofactors. Herein we report that cofactor NAD(H) covalently attached to silica nanoparticles successfully coordinated with particle-immobilized enzymes and enabled multistep biotransformations. Specifically, silica nanoparticle-attached glutamate dehydrogenase (GLDH), lactate dehydrogenase (LDH) and NAD(H) were prepared and applied to catalyze the coupled reactions for production of ␣-ketoglutarate and lactate with the cofactor regenerated within the reaction cycle. It appeared that particle–particle collision driven by Brownian motion of the nanoparticles provided effective interactions among the catalytic components, and thus realized a dynamic shuttling of the particle-supported cofactor between the two enzymes to keep the reaction cycles continuing. Total turnover numbers (TTNs) as high as 20,000 h−1 were observed for the cofactor. It appeared to us that the use of particle-attached cofactor promises a new biochemical processing strategy for cofactor-dependent biotransformations. © 2008 Elsevier B.V. All rights reserved. 1. Introduction Cofactor-dependent oxidoreductases constitute an important group of enzymes that promise highly selective synthesis of chiral compounds such as chiral alcohol, hydroxyl acids or amino acids (Hummel, 1999). Naturally occurring cofactors like NAD(H) and NADP(H) generally act as electron carriers facilitating such redox biotransformations and are consumed at stoichiometric ratios. Native cofactors are often much more expensive than the enzymes and their regeneration and reuse are critical for any preparative applications. Compare to other regeneration methodologies such as chemical and electrochemical reactions, enzyme-catalyzed cofactor regeneration offers selective and mild reactions and has been pursued extensively. Such enzymatic regeneration generally requires a cofactor effectively shuttle among different enzymes to keep the regeneration cycles continuing. Although enzymatic regeneration of free cofactors have been demonstrated for many biotransformation reactions, it has been a long-standing challenge in realizing cofactor regeneration with the enzymes and cofactor both immobilized (Liu and Wang, 2007). ∗ Corresponding author. Tel.: +1 612 624 4792; fax: +1 612 625 6286. E-mail address: [email protected] (P. Wang). 0168-1656/$ – see front matter © 2008 Elsevier B.V. All rights reserved. doi:10.1016/j.jbiotec.2008.09.015 Nevertheless, several different approaches have been explored to realize cofactor regeneration in immobilized reaction systems. Cofactor retention by using microcapsules (Chang et al., 1982; Ilan and Chang, 1986; Yu and Chang, 1981a,b, 1982) or membrane reactors (Howaldt et al., 1990; Ikemi et al., 1990a,b; Kitpreechavanich et al., 1985; Kulbe et al., 1990; Lin et al., 1997, 1999; Nidetzky et al., 1996, 1994; Obón et al., 1996, 1998; Röthig et al., 1990) has been the most widely adopted method. The cofactors essentially act in form of free cofactors in such membrane-restricted reaction systems. However, it has been always challenging to balance between the permeability of the substrates or products and the retention of the enzymes and cofactors, especially with cofactors of small sizes. Enlarging the size of cofactors by chemical modification with water soluble polymers can alleviate this problem to certain extent (Davies and Mosbach, 1974; Devaux-Basseguy et al., 1997; Furukawa et al., 1980; Larsson and Mosbach, 1974; Stengelin and Patel, 2000; Wandrey and Bossow, 1986; Yamazaki et al., 1976); however, such modifications may also deactivate cofactors (Larsson and Mosbach, 1974; Zappelli et al., 1976, 1975). Compare to membrane-contained systems, solid supportattached insoluble cofactor and enzymes are much easier to reuse and may afford more flexible reactor design. Early trials with support-attached cofactor–enzyme systems generally failed. Wykes et al. (1975) prepared immobilized NAD+ by coupling it with a hexamethylamine derivative of agarose using W. Liu et al. / Journal of Biotechnology 139 (2009) 102–107 dicyclohexyl-carbodiimide, while lactate dehydrogenase (LDH) and yeast alcohol dehydrogenase (YADH) were immobilized on DEAEcellulose matrices. The results showed that both immobilized enzymes and immobilized cofactor were active when they were tested separately with their free counterparts, but no activity could be detected with immobilized NAD+ and immobilized dehydrogenases. In another effort, Gestrelius et al. co-immobilized NADH along with horse liver alcohol dehydrogenase (HLADH) on cyanogen bromide-activated Sepharose 4B to catalyze the reduction of lactaldehyde (Gestrelius et al., 1975). The immobilized system successfully catalyzed the desired reaction and the cofactor was also able to be regenerated with the same enzyme by feeding the reaction system with a secondary substrate, ethanol. However, the cofactor could not be regenerated when a second enzyme LDH was applied. In a later work, LDH was co-immobilized by using glutaraldehyde (GA) to Sepharose-bound NAD+ –HLADH complex, and moderate cofactor regeneration activity was reported with such an immobilized system (Månsson et al., 1979). A successful example for immobilized enzyme-coupled regeneration of immobilized cofactor was reported by Yamazaki and Maeda (1982). An NAD+ derivative carrying a vinyl group was copolymerized into a polyacrylamide gel inside which enzymes were physically entrapped. The rate of cofactor regeneration of such an immobilized system was reported to be 14 h−1 . Recently, cofactor and enzymes were covalently immobilized utilizing nano-porous structure of porous silica glass (El-Zahab et al., 2004). LDH and a regenerating enzyme glucose dehydrogenase (GDH) were coimmobilized along with NADH via spacers of different sizes. The coupled reactions catalyzed by the co-immobilized LDH and GDH were achieved, indicating immobilized NAD(H) shuttled between co-immobilized enzymes. However, recycling rate of cofactor was still low (with total turnover number (TTN) up to 102). All the above approaches have been developed by confining the catalyst systems into a limited space. Again, that is likely to be associated with mass transfer limitations. One alternative approach is to use particle-immobilized systems, where active enzyme–cofactor interactions can be realized through particle–particle collisions, while the reaction system is more open to substrates in the reaction media (Wang, 2006). Mobile nanoparticle systems based on hetero-bifunctional polymer particles (Du et al., 2005) and artificial nanotransport systems created from microspheres and motor protein (Yokokawa et al., 2008) have been successfully demonstrated. The mobility of nanoparticles were also applied to enable multistep biotransformations in a recent work with polystyrene particle (500 nm in diameter)-attached cofactor NAD(H) along with four enzymes that were also immobilized on particles for the synthesis of methanol from carbon dioxide (El-Zahab and Wang, 2008). However, only moderate TTN was achieved (<1 h−1 ). In a previous study we have demonstrated that the size of particles can impact the activity of the surface-attached enzymes by controlling the frequency of collision (Jia et al., 2003), and smaller particles could afford higher specific enzyme activities because of their higher mobility. In the current work, we apply silica nanoparticles of 30 nm in diameter as the supports to immobilize enzymes and cofactor to examine the effectiveness of cofactor regeneration with particleattached systems. As a model system, glutamate dehydrogenase (GLDH) and lactate dehydrogenase and their cofactor NAD+ were immobilized separately on the nanoparticles for this study. 103 1.1.1.27, Type XI, salt-free lyophilized powder), NAD+ and NADH were purchased from Sigma Chemical Co. (St. Louis, USA). Sodium pyruvate and l-glutamic acid were purchased from Acros Organics (Gell, Belgium). The latter was neutralized with sodium hydroxide before using. Silica nanoparticles with an average diameter of 30 ± 5 nm and a specific surface area of 200 ± 20 m2 /g were purchased from Zhjiang Hongsheng Science & Technology (Zhoushan, China). ␥-Glycidoxypropyl trimethoxysilane (GPS) was provided as a gift from Nanjing Shuguang Chemicals (Nanjing, China). Other chemicals including toluene, triethylamine (Et3 N), acetone, sodium phosphate, citric acid, triethanolamine, hydrochloric acid, sodium hydroxide, NH4 Cl, NH4 OH, Tris and HEPES were all of analytical grade. 2.2. Activation of silica nanoparticles Silica nanoparticles were activated according to modified procedure as reported previously (Lin et al., 2001). A typical procedure included the addition of 1 g silica nanoparticles into 49 mL toluene. After sonication for 30 min, 0.15 mL Et3 N and 1 mL GPS were then added into the suspension. The activation reaction was carried out with reflux and stirring at 115 ◦ C for 3 h under N2 atmosphere. After being air-cooled to room temperature, the particles were recovered via filtration and then washed with acetone for several times. The amount of epoxide groups tethered to the particles was determined by an acid–base titration method (Sundberg and Porath, 1974). The titration was typically conducted with a hydrochloric acid after reacting the activated and dried silica nanoparticles (0.5 g) with 5 mL sodium thiosulfate solution (1.3 M) for 2 h. The loading of epoxide groups was measured to be 0.6 mmol/g-particle. 2.3. Immobilization of enzyme and cofactor 2. Materials and methods Enzymes were immobilized onto the silica particles by forming covalent bonds through the epoxide group on the surface of the particles. Typically 100 mg silica and 2.4 mg enzyme (either GLDH or LDH) were mixed in 1.5 mL pH 7.5 phosphate buffer (0.1 M) at 4 ◦ C under shaking (200 rpm). The reaction was allowed to last 24 h before the particles were removed from the solution via centrifugation (13,000 × g). The particles were washed at least three times with 25 mL of 0.1 M Tris–HCl buffer (pH 7.5) solution each time till no protein was detected in the washing solution. Enzyme loading on the particles was determined based on the difference of the protein content in the solution (including the washing solution) before and after immobilization as measured using Bradford assay. Typical loading of GLDH was found to be 13 ± 0.2 mg-enzyme/g-particle, while that for LDH was 20 ± 0.2 mg/g. These results are comparable to those reported previously for enzymes covalent attached to nanostructures (El-Zahab et al., 2004; Kim et al., 2006), yet lower than those physically absorbed onto polymeric beads where loadings around 4.4% (w/w) were achieved (Le and Means, 1998). The procedures for cofactor (NAD+ ) immobilization and subsequent purification were similar to that of the enzymes except the materials were applied with a different ratio: 10 mg cofactor was added for each 5 mg activated silica particles. The modified particles were also washed using 1 M NaCl solution in addition to the washing with buffer solution in order to remove any physically absorbed cofactor molecules. Immobilized loading of NAD+ was found to be rather high, 0.4 g-cofactor/g-particle, approaching 100% of the epoxide group on the surface of the particles. 2.1. Materials 2.4. Enzymatic reactions GLDH from bovine liver (EC: 1.4.1.3, Type III, lyophilized powder with a protein content of 70%), LDH from rabbit muscle (EC: Unless specified otherwise, enzymatic reactions were conducted in 0.1 M Tris–HCl buffer (pH 7.5) at room temperature under 104 W. Liu et al. / Journal of Biotechnology 139 (2009) 102–107 Fig. 1. A postulated reaction mechanism for silica nanoparticles-supported enzyme–cofactor catalyst system (NAD+ and NADH: oxidized and reduced format of the cofactor nicotinamide adenine dinucleotide; GLDH: glutamate dehydrogenase; LDH: lactate dehydrogenase). shaking (130 rpm), with the amount of each catalytic component was controlled to reach the desired molar ratio. A typical reaction may include the use of 10 mg GLDH-carrying particles, 1 mg LDH nanoparticles and 0.4 g NAD+ -particles applied in 0.8 mL reaction solution containing 20 mM glutamate and 10 mM pyruvate. The reaction rate of the couple reactions was monitored by measuring the production rates of the reaction products. Aliquots of 80 L were taken periodically for HPLC analysis after centrifugation at 20,000 × g for 10 min to remove the catalysts. A Waters HPLC system equipped with a Supelcosil C-18 column (250 mm × 4.6 mm) was applied with 0.05 M sodium phosphate solution of pH 3.0 as the mobile phase at a flow rate of 0.5 mL/min. Analyses were conducted with triplicates, standard errors were generally within 5%. As the characterization of particle’s dispersion in the reaction solution, the effective diameter of silica nanoparticles suspended in the solution was measured using a dynamic laser light-scattering particle size analyzer (Brookhaven 90Plus, USA). 3. Results and discussion 3.1. Coupled reactions with in situ regeneration of particle-attached NAD(H) Fig. 1 depicts the postulated interactions among the enzymes and cofactor involved in the reaction system. Cofactor regeneration cycle is realized through the action of two enzymes, LDH and GLDH. The translocation of the cofactor between the two enzymes is essential to the desired coupled reactions. Free enzymes and cofactors generally assume good Brownian motion mobilities in a homogeneous reaction environment for efficient biotransformations. Nanoparticle-attached enzymes, albeit being immobilized on insoluble solid supports, may possess similar mobilities through the Browniang motion of the particles and thus enable reactions with velocities that are in some cases close to those of homogeneous reactions with free enzymes (Jia et al., 2003). For the current reaction system, the mobility of particles is expected to generate particle–particle interactions that allow the surface-exposed cofactor coordinate with the enzymes and thus driving forward the reactions. The silica nanoparticle-supported enzyme–cofactor system examined in this work appears to follow such a reaction mechanism. Data reported in Fig. 2 compare the reaction system to soluble free enzymes and cofactor. To avoid possible leaching of the enzymes and cofactor from the particles, an extensive washing procedure including the use of salted solutions has been applied during the preparation of the immobilized catalysts. It was also observed through our analytical procedure that reactions were effectively stopped upon the removal of silica particles via centrifugation, further supporting the observed activities of the particle-attached enzymes and cofactor. The reaction rates achieved with the immobilized catalyst system were comparable to those of free catalyst system when the initial concentration of the cofactor was low (Fig. 2). However, the maximum reaction velocity (vmax ) of the immobilized system was only about 50% of that of the free system. Unlike the free catalyst system, the immobilized catalyst reach cofactor saturation at a very low cofactor concentration (1 M), indicating a low apparent Michaelis constant (KM ). Interestingly, the immobilized system showed a higher vmax than the reactions with either only the enzymes or the cofactor was immobilized. Since the particles were also able to adsorb free enzymes or cofactor, we believe the slowed reactions of the partially immobilized catalyst systems have been resulted from the reduced availability of the free catalytic components in the solution. The silica particles can generally absorb a good amount of enzymes or cofactor onto their surfaces. Although certain binding sites have been occupied with covalently attached catalytic species, there are still binding sites open on the particles for physical adsorption. Those physical binding sites were able to absorb enzymes and cofactor during the immobilization procedure; however, subsequent washing and purification steps after immobilization will then leave those sites open again for future adsorption. Fig. 2. Effect of initial cofactor concentration on reaction velocity. Volume of reaction solution was controlled to be 0.8 mL, the amount GLDH- and LDH-attached particles were 0.13 and 0.02 mg; and the concentrations of glutamate and pyruvate were 20 and 10 mM, respectively. Reaction velocity is defined as mol-product/min. W. Liu et al. / Journal of Biotechnology 139 (2009) 102–107 105 Table 3 Effect of buffer solution on the TTN of particle-attached NAD(H). Reactions were conducted with particles carrying an equivalent amount of 0.3 M of cofactor. Both substrates, glutamate and pyruvate, were applied at a concentration of 30 mM. Reactions were allowed to last 2 h. For all buffer solutions examined were set for pH 7.5 with a total salt concentrations as 0.1 M. Buffer systems TTN Na2 HPO4 –NaH2 PO4 Na2 HPO4 –KH2 PO4 Na2 HPO4 –citric acid Triethanolamine–HCl Tris–HCl NH4 Cl–NH4 OH HEPES–NaOH Fig. 3. Total turnover number (TTN) of particle-attached cofactor NAD(H) as a function its initial concentration. (TTN was determined for a reaction time of 8 h, defined as moles of product normalized with respect to the moles of cofactor applied. Reaction conditions are the same as that in Fig. 2.) Examination on the total turnover number of the cofactor achieved with the particle-immobilized catalyst system indicated that very dynamic cofactor–enzyme interactions have been realized. As shown in Fig. 3, TTN for a reaction time of 8 h reached as high as 2800 (or equivalent to ∼350 h−1 ) when the initial concentration of the cofactor was low (0.3 M). Since the reaction reaches cofactor saturation at a low NAD+ concentrations, increasing the amount of NAD+ did not improve the overall reaction rate, but led to TTNs decreasing with a ratio proportional to the reciprocal of the cofactor concentration (Fig. 3). However, higher TTNs can be achieved by increasing the concentrations of the substrates or the amount of enzymes. Table 1 summarizes the data of TTN for a reaction time of 1 h but with much higher concentrations of enzymes and substrates. When glutamate and pyruvate concentration both increased to 30 mM, a TTN of 15,700 h−1 was achieved. Further increase in substrate concentration led to decreased percentage conversions of the substrates, indicating the reaction was approaching substrate saturation. 1,200 740 450 16,000 18,000 6,700 17,000 We further examined the effect of enzyme ratio on the efficiency of cofactor regeneration by fixing the concentration of silica-attached NAD+ at 0.3 M. As shown in Table 2, both initial reaction rate and the TTN of NAD+ decreased as the GLDH increased. This result was surprising since additional amounts of enzymes should not inhibit the reaction even if not promote the reaction. Apparently other factors instead of enzyme ratio are predominant at the current reaction conditions. As to be discussed in the following, the total amount of particles in the solution has in fact a stronger impact on the performance of the particle-supported reaction system. 3.2. Factors that control the performance of particle-attached NADH The physicochemical properties of the reaction solution may have a strong impact on the particle-supported catalyst system. For that, we especially examined the effect of the properties of buffer solution and total amount of particles, as both may impact the dispersion, aggregation and motion of the particles. Table 3 shows the effect of different types of buffer systems set at pH 7.5 on the TTN of silica-attached NAD(H). As a result, TTN was generally low when phosphate buffer solutions were applied, similar to the observations reported by others for NAD(H) with phosphate buffer solutions (Chenault and Whitesides, 1987). However, high TTNs (above 15,000 within 2 h) were observed with other buffer systems tested with Tris–HCl buffer gave the highest TTN. We further examined the effect of pH value and the concentration of the Tris–HCl buffer system. Within the range of pH values tested (varied from Table 1 TTN of the coupled reactions with particle-attached cofactor and enzymes with different substrate concentrations. The reactions were conducted with 10 mg GLDH particles, 1 mg LDH particles, NAD particles with amount of cofactor equivalent to 0.3 M in 0.8 mL buffered reaction solution for 1 h. Pyruvate (mM) Glutamate (mM) Initial reaction rate (mol/min) 2.5 5 10 15 20 25 30 30 20 20 20 20 20 20 20 30 0.019 0.030 0.070 0.120 0.227 0.433 0.460 0.418 TTN of silica-supported NAD+ 585 1,100 3,290 6,600 9,500 14,200 15,000 15,700 Glutamate conversion (%) Pyruvate conversion (%) 1.0 1.8 5.5 11.0 15.9 23.7 25.1 17.4 7.8 7.3 11.0 14.7 15.9 19.0 16.7 17.4 Table 2 Effect of mass ratio of particle-attached enzymes on the TTN of the cofactor. The reactions were conducted with NAD particles of an amount equivalent to 0.3 M cofactor, 20 mM glutamate and 10 mM pyruvate in 0.8 mL buffered reaction solution for 1 h. Silica bearing GLDH (mg) Silica bearing LDH (mg) Mass ratio of GLDH to LDH Initial reaction rate (mol/min) TTN of silica-attached NAD+ 1 5 10 20 1 1 1 1 0.6 3.2 6.5 13.5 0.097 0.079 0.070 0.058 4200 3600 3300 2300 106 W. Liu et al. / Journal of Biotechnology 139 (2009) 102–107 Fig. 4. Effect of pH value on the TTN of particle-attached NAD(H) with particleattached enzymes. The reactions were conducted with 0.1 M Tris–HCl buffer solution for 1 h. Volume of reaction solution was 0.8 mL with GLDH- and LDH-particles were applied at 1 mg each; the amount NAD-particles was controlled to maintain a cofactor of 0.3 M; both glutamate and pyruvate were applied at 30 mM. 7.3 to 8.0, determined by the preferred pH of GDH and LDH), the reaction appeared to be insensitive to changes in pH value (Fig. 4). Instead, the concentration of Tris salt in the buffer solution showed a stronger impact (Fig. 5). It appeared lower salt concentrations are preferred with TTN reached 20,000 h−1 at 10 mM. Particle mobility is a key factor in realizing the regeneration of the cofactor and coupled reactions with the immobilized catalytic system. Higher concentration of particles is generally desired to improve the collision frequency and thus the overall reaction rate; however, particles also tend to aggregate at higher concentrations. Although the surface-attached enzyme and cofactor molecules improve the compatibility of the particles with the aqueous solution and help them disperse, they are also “sticky” to each other and aggregation will be more likely to form at higher concentrations. We examined this issue by studying the reaction rate as a function of concentration of total particles. As shown in Fig. 6, TTN of the cofactor maintained high when the solid concentration was low (with liquid–solid mass ratio above 200 in Fig. 6), whereas it dropped sharply as the solid concentration further increased Fig. 6. Effect of liquid–solid mass ratio on the TTN of particle-attached NAD(H). () TTN of the cofactor realized with 10 mg GLDH particles and 1 mg LDH particles in various amount of liquid solution (0.5–3 mL, pH 7.5), with all the other reaction conditions the same as those in Fig. 4. () The effective diameter of particles and their aggregates in the reaction solution determined via light scattering. (in the low value region of the liquid–solid mass ratio). That suggested a critical phase transition of the particles took place when the liquid–solid ratio reduced to 200. Our particle size detection using light scattering also supported such a transition as the apparent particle size increased sharply as the liquid–solid mass ratio decreased, indicating severe particle aggregation took place at that solid concentration region (Fig. 6). 4. Conclusions GLDH, LDH and their cofactor NAD(H) were covalently immobilized separately on the surface of silica nanoparticles and were applied successfully for coupled biotransformation reactions with in situ cofactor regeneration. As expected, the mobility of the particles is critical to realizing dynamic enzyme–cofactor interactions, and efficient biotransformations can be achieved when the particles well dispersed in the solution. 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