Available online at www.sciencedirect.com ScienceDirect Prokaryotic cell division: flexible and diverse Tanneke den Blaauwen Gram-negative rod-shaped bacteria have different approaches to position the cell division initiating Z-ring at the correct moment in their cell division cycle. The subsequent maturation into a functional division machine occurs in vastly different species in two steps with appreciable time in between these. The function of this time delay is unclear, but may partly be explained by competition for Lipid-II between proteins involved in length growth that interact directly with the Z-ring early in the maturation phase and the proteins involved in septum synthesis. A second possible activity of the early Z-ring might be the monitoring of or the active involvement in DNA segregation through proteins such as ZapA and ZapB/MatP and their homologues. Addresses Bacterial Cell Biology, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands Corresponding author: den Blaauwen, Tanneke ([email protected]) Current Opinion in Microbiology 2013, 16:738–744 This review comes from a themed issue on Growth and development: prokaryotes Edited by Thomas G Bernhardt and Waldemar Vollmer For a complete overview see the Issue and the Editorial Available online 28th September 2013 1369-5274/$ – see front matter, # 2013 Elsevier Ltd. All rights reserved. http://dx.doi.org/10.1016/j.mib.2013.09.002 Introduction Escherichia coli has been the dominant Gram-negative organism to study cell division and its mode of division has therefore become the default. The increased genetic accessibility, cultivability of bacterial species and the fluorescent protein revolution have given access to other organisms that show quite some variation in their approach to binary fission. From these studies the question emerges whether the variation concerns only the preparation for division or also the core of the molecular mechanism. Cell division in E. coli is initiated by the polymerization of the tubulin homolog FtsZ in a ring-like structure at mid cell. This ring recruits the proteins that are required for the synthesis of the septum during division. Binary fission requires the cell to define its middle, to know when to initiate division and to regulate the concerted invagination of the envelope with timely segregation of the chromosomes. This review discusses the various solutions Gram-negative Current Opinion in Microbiology 2013, 16:738–744 (and some Gram-positive) species have found to reliably handle these three problems. Spatial regulation of the Z-ring Negative regulation The polymerization of the tubulin homologue FtsZ at midcell in rod-shaped bacteria is thus far recognized as the first step in the initiation of binary fission. The polymers assemble into a ring-like structure that will guide the cell envelope synthetic machinery during the synthesis of the septum to create two new cell poles. The concentration of FtsZ molecules in the gamma-proteobacterium Escherichia coli is on average 4.5 mM [1,2]. With a critical concentration for polymerization of 1–2 mM [3], the polymerization of FtsZ has to be inhibited continuously and everywhere in the cell until the cell is ready to divide. This is achieved by the combined action of the Min system, which inhibits polar Z-ring formation and by the nucleoid occlusion system that prevents the formation of FtsZ polymers near the nucleoids. The Min system consists of the FtsZ inhibitor MinC [4], which is bound to the cytoplasmic membrane by the ATPase MinD. In the ATP bound form MinD dimerizes and binds cooperatively to the cytoplasmic membrane with an amphipathic helix, whereas in the ADP bound form, MinD is cytoplasmic. The third protein of the min system, MinE is also associated with the cytoplasmic membrane and stimulates the ATPase activity of MinD forcing it to release from the membrane [5]. The MinCD concentration is highest at one of the cell poles. Consequently, their release causes movement of the min proteins to the opposite cell pole during which MinD exchanges ADP for ATP and binds again cooperatively to this cell pole. The MinE stimulated release of MinCD from this pole causes subsequently the opposite movement, which results in an oscillation of the MinCD proteins between the two poles of the cell every 20–50 s [6–9] (Figure 1A). Consequently, FtsZ cannot establish a stable Z-ring close to the cell poles. In the absence of the Min system, FtsZ is able to form polar Z-rings and DNA-less mini cells are produced. Two mechanisms could contribute to the nucleoid occlusion effect. The first is an active enzymatically regulated mechanism. SlmA is a TetR-like DNA binding protein with approximately 50 binding sites regularly distributed on the chromosome with the exception of a region flanking the DNA replication terminus called the Ter macrodomain [10,11]. The SlmA dimer interacts with helices on the surface exposed face of the FtsZ C-terminal domain blocking higher ordered structures but not protofilament formation [10,12]. SlmA binds to DNA as a dimer of dimers and can spread over the DNA preventing FtsZ www.sciencedirect.com Prokaryotic cell division: flexible or diverse den Blaauwen 739 Figure 1 (a) MinE D1 ParB/S MinCD - + FtsZ holdfast + TipN MipZ + + D2 - ParA oscillating Min system nucleoid (b) stalked cell D3 and nucleoid occlusion - - - MipZ gradient, FtsZ displaced - + - (c) flagellum D4 ZapAB + - MatP segregation registration Current Opinion in Microbiology Prevention of premature polymerization of FtsZ into the division ring. (A) In E. coli MinC (red) inhibits FtsZ polymerization. MinD (red) is bound to the membrane in the ATP bound state and recruits MinC. MinE (purple band) binds to the membrane upon interaction with MinD and stimulates the ATPase activity of MinD causing its release from the membrane and concomitantly that of MinC [5]. Because of the absence of MinCD in the other half of the cell, the proteins diffuse to the opposite pole. On its way MinD loads an ATP molecule, which allows the protein to dimerize, collect minC, and bind to the membrane of the opposite pole. Here, the MinE stimulated release starts again. As a results the Min proteins oscillate from one pole to the other inhibiting FtsZ polymerization everywhere until the cell has reached sufficient length to have a non-inhibitory MinC concentration at mid cell. The Min oscillation is probably one of the most computer-simulated bacterial systems known [8,9]. (B) The nucleoid (grey) inhibits the formation of higher order FtsZ structures because of the presence of an oligomeric configuration of SlmA proteins bound to the DNA as a dimer of dimers [10– 13,14]. (C) Because SlmA has no DNA binding sites in the chromosomal Ter macrodomain, the Z-ring can be formed over chromosomes that are not completely segregated. The binding of ZapA and ZapB (green) to the Z-ring facilitates their interaction with the chromosomal Ter macrodomain condensing protein MatP (yellow) [55,56]. The Z-ring is either able to sense the status of chromosome segregation through ZapB or ZapB might be actively involved in DNA segregation one way or another. (D1) In C. crescentus the origin of DNA replication is bound to the stalked pole by ParB/parS (blue). The FtsZ inhibiting protein MipZ (green) binds as well to DNA as to ParB. Here, a gradient from ParB extending over the nucleoid is formed because the ATP-bound dimeric form of MipZ has a higher affinity for DNA than for ParB whereas the ADP-bound monomeric form of MipZ has a higher affinity for ParB. [25]. (D2) When the DNA origins are replicated, the new origin and new ParB/parS are pulled towards the flagellar pole by ParA polymers bound to the TipN protein (black) [22,23]. (D3) This causes MipZ to be distributed in a gradient in the cell that is highest at the poles and lowest at the division site like the Min proteins in E. coli. MipZ displaces FtsZ (orange) still present from the previous division in the non-stalked pole. (D4) When the cell has reached sufficient length to have a local minimum of MipZ proteins and the FtsZ gene is duplicated and methylated [26], which allows the synthesis of new FtsZ proteins, a Z-ring can be formed. protofilament association [13,14]. The second, passively regulated mechanism might involve cotranslational translocation of proteins across the cytoplasmic membrane [15]. About 30% of E. coli proteins have an envelope destination and the crowded continuum between the chromosome, mRNA, and the protein translocon might physically block stable FtsZ polymer formation. However, at the moment no conclusive experimental evidence is available to validate this hypothesis. In conclusion, the Z-ring will not be formed at mid cell until the cell has www.sciencedirect.com reached a length where the Min proteins concentration is sufficiently low at mid cell to allow FtsZ polymerization and the nucleoids have been segregated to an extend that only the chromosomal Ter macrodomains remain at mid cell. The equally well-investigated Gram-positive rod-shaped bacterium Bacillus subtilis has a non-oscillating Min system consisting of the MinC, MinD, MinJ and DivIVA proteins. B. subtilis first synthesizes a new septum, which Current Opinion in Microbiology 2013, 16:738–744 740 Growth and development: prokaryotes is cleaved at a later point in the cell cycle. The DivIVA protein is a curvature sensitive membrane protein [16,17] that binds to the old cell poles and the new septa. MinJ recruits MinC and MinD to DivIVA, where MinC prevents additional Z-ring formation. Cleavage of the septum causes the collapse of the DivIVA structure in a number of patches, which are still sufficient to prevent Zring formation near these poles [18]. The NOC protein [19], which is not homologous to SlmA, is responsible for nucleoid occlusion. Like SlmA, its DNA binding sites are dispersed over the chromosome but absent from the Terdomain [20]. Thus far it has not been possible to detect a direct interaction of NOC with FtsZ suggesting that it inhibits division by another mechanism than SlmA [21]. An inhibitive gradient-nucleoid occlusion all-in-one system has evolved in the alpha-proteobacterium Caulobacter crescentus. Its nucleoid is bound to the stalk pole by ParB that binds to parS DNA sequences in the vicinity of the origin of replication [22,23]. MipZ is a MinD-type ATPase that binds DNA nonspecifically as a dimer in the ATP bound state and that also interacts with ParB [24]. Upon DNA replication, the new origin of replication is segregated actively by ParA that polymerizes between the new ParB/parS origin regions and the TipN protein attached to the opposite or flagellar cell pole of the crescent-shaped cell [22,23] (Figure 1D). In this process MipZ is pulled along to the flagellar cell pole where it displaces FtsZ, which has remained at this poll since the previous division. As a result both poles are now occupied by the FtsZ polymerization inhibiting MipZ, which leaves the mid cell position free for the assemblage of the Z-ring provided that the nucleoids are sufficiently segregated to have a minimal MipZ concentration at mid cell [25]. Additionally, by coupling the expression of FtsZ and MipZ to the full methylation state of the promoter region of their genes, their expression is coordinated with chromosome replication [26]. Positive regulation The rod-shaped delta-proteobacterium Myxococcus xanthus has opted for a system that positively regulates the formation of the Z-ring at mid cell using again a MinD-like ATPase; PomZ [27]. PomZ localizes to the future site of division before FtsZ and is assumed to recruit FtsZ via another unidentified protein. Although the GTPase activity of purified M. xanthus FtsZ could be measured, FtsZ polymers have not been described in the literature. Therefore, protofilament formation of detectible length might require a positive regulator in M. xanthus. Positive regulation of FtsZ ring formation has been reported for some Gram-positive species as well [28,29]. Recently, a rod-shaped Gram negative gammaproteobacterium that lives in symbiosis with the nematode Laxus oneistus has been described to divide longitudinal instead of transverse [30]. The young nondividing cells of this sulfur-oxidizing marine bacterium Current Opinion in Microbiology 2013, 16:738–744 were shown to contain hardly any FtsZ, whereas the dividing cells showed a clear Z-ellipsoid along their length axes (Figure 2C). This might therefore be another example of positive Z-ring regulation. Sloppy positioning Many Gram-negative bacteria position their Z-ring very precisely. For instance, E. coli positions its septum at 50 3% (N.O.E. Vischer and T. den Blaauwen, unpublished) of its cell length and C. crescentus positions the division site slightly off mid cell at 53.7 0.1% [23]) of its cell length. The helix-shaped epsilon-proteobacterium Helicobacter pyloris positions its Z-ring with very little precision [31] and might correct for difference in daughter cells size by regulating growth speed of the individual daughter cells, as does Mycobacterium tuberculosis [32,33] and Corynebacterium glutamicum [34] that position their Zring in the 25–75% region of their cell length. In conclusion, multiple mechanisms exist that lead to a satisfactory Z-ring positioning. Is this diversity propagated in the maturation of the division machinery and in the molecular mechanism to synthesize the septum or do all routes converge to the same mechanism? Timing of the assembly of the division protein complex Division requires the participation of a large number of proteins that are collectively termed the divisome. These proteins can be functionally discriminated in Z-ring organizing proteins, proteins involved in peptidoglycan construction and regulatory proteins with a less clear function. The timing in the cell division cycle of the mid cell localization of divisome proteins has been investigated in E. coli, either by synchronization [1] or by growing cells such that their cell age can be related to cell length [35,36] (Figure 2A). In C. crescentus cell age can be determined by synchronization of the cell division cycle (Figure 2B) and in the rod-shaped Gram-positive Bacillus subtilis by timelapse movies of out growing spores [37]. Alternatively, for the American football-shaped Gram-positive Streptococcus pneumonia cell age is deduced from cell size selection after imaging of the cells [38,39]. In the four very unrelated species investigated, the assembly of the division machinery occurs in at least two distinct time-separated steps. One is the polymerization of the FtsZ-ring with a number of Zring associated proteins such as FtsA, ZipA, ZapA, ZapB, and EzrA. About 20% of the cell cycle later the proteins that are associated with septum synthesis such as the FtsQLB complex, FtsK, PBPs, FtsW, and FtsN localize. Apparently, a broad consensus exists about the necessity for timeseparated assembly of the division machinery. Interaction between the proteins responsible for elongation and cell division Evidence is accumulating that proteins, which are normally involved in cell elongation, assemble at mid cell in www.sciencedirect.com Prokaryotic cell division: flexible or diverse den Blaauwen 741 Figure 2 (a) 100/0% (b) 19-30% 80% 40-55% 60% 100% swarmer cell 20% Escherichia coli holdfast 25-38% stalked cell 60% flagellum 48-52% Caulobacter crecentus (c) ? Laxus oneistus symbiont Current Opinion in Microbiology The cell division cycle of three gram-negative species with different approaches to cell division are schematically presented. (A) In the gammaproteobacterium E. coli the Z-ring (orange circle) is formed at about 25–38% of a division cycle of 85 min. Between 48 and 52% of the cycle the majority of the proteins involved in septum synthesis and coordination of the invagination of the three layered cell envelope have arrived at mid cell (purple circle) and at 60% a clear beginning of a constriction can be discriminated by phase contrast microscopy [1,35,36]. (B) The alphaproteobacterium C. crescentus has a free-living form, the swarmer cell, and a sessile-form the stalked cell. During a division cycle of 120 min the Z-ring and associated proteins localize at the division site between 19 and 30% of the cycle and the septum synthesizing proteins localize between 40 and 55%. Division commences at 60% of the division cycle [41]. (C) The Laxus oneistus symbiotic gamma-proteobacterium stands with one pole on the epidermis of the marine nematode and growths in width. At an unknown point in its division cycle it places a Z-ring along its length axes and divides longitudinally to ensure that each of the two daughter cells will bind to the worm [30]. It is not known whether these bacteria show a similar delay in divisome maturation as the other two species in this figure. close association with the Z-ring formation. In E. coli, the actin homologue MreB that recruits the proteins involved in elongation, the peptidoglycan transpeptidase PBP2 and the lipid-II synthase MurG localize at mid cell before the Z-ring is fully established [35,40]. In C. crescentus FtsZ localization is followed by MreB and MurG and the Z-ring associated proteins [41,42]. In the absence of the late localizing cell division proteins, such as the FtsQLB complex [43], the PBP3FtsW complex [44] and FtsN, E. coli synthesizes a band of peptidoglycan at the position of the Z-ring [45] whereas C. crescentus synthesizes a much broader band of new peptidoglycan [46]. Since the Z-ring cannot synthesize peptidoglycan, a logical function for the mid cell localization of MreB, PBP2 and MurG, would be the synthesis of a band of so-called ‘preseptal’ peptidoglycan or PIPS [45,47]. Curiously, PIPS has been shown to be present in cells that lack almost all known proteins involved in peptidoglycan synthesis or hydrolysis including the MreBCD proteins and only FtsZ, ZipA and www.sciencedirect.com either PBP1a or PBP1b and possibly PBP2 were required [48]. Interestingly, in the presence of an MreB mutant that is not able to interact with FtsZ but that is functional in elongation, a mature divisome is formed that is not able to synthesize peptidoglycan [40]. Another function of the presence of the elongation proteins at mid cell could be the positioning of the Lipid-II synthesizing protein complex [42,49] and possibly the bifunctional class A PBPs. The presence of Lipid-II and a band of newly synthesized peptidoglycan could attract the protein complex required for septal peptidoglycan synthesis leading to the functional maturation of the division machinery. PBPs of several bacterial species localize/delocalize because of the presence/absence of their substrate [35,50,51,52]. Function of two-step assemblage of the division machinery At least three rod-shaped and one American footballshaped bacterial species are known to mature their Current Opinion in Microbiology 2013, 16:738–744 742 Growth and development: prokaryotes divisome in two clearly separated steps in time. What is the purpose of this delay? It seems unlikely that this time period is required to synthesize preseptal peptidoglycan, since C. crescentus and E. coli synthesize vastly different amounts of preseptal peptidoglycan during this delay in divisome assembly. One additional function might be to contribute to chromosome segregation into the two daughter cells to prevent their bisection by cell division. In Enterobacteriaceae and Vibrionaceae species, ZapA and ZapB have, apart from their putative Z-ring stabilizing function [53,54], at least a second and potentially much more important function: The Ter macrodomain in these species is compacted by MatP that binds to approximately 23 matS sequences in this chromosome region [55,56]. During DNA replication and segregation, the termini of the E. coli chromosomes end up in the middle of the cell. ZapA recruits ZapB to the Z-ring, where ZapB is able to interact with MatP and respond to the status of DNA segregation [57]. Although detailed information of many bacterial species is lacking, the present knowledge of bacterial cell division suggests that many roads lead to a satisfactory positioning of the Z-ring. The next step towards maturation of the division machinery seems to be more conserved and requires communication between the elongasome and the Z-ring, preseptal peptidoglycan synthesis and a chromosome segregation (monitoring) system. Further research on the diversity of bacterial species will help to disentangle local variation from the core business of binary fission. Acknowledgements This work was supported by the DIVINOCELL project of the European Commission (FP7-Health-2007-B-223431). I thank Leendert Hamoen for critically reading the manuscript. References and recommended reading Papers of particular interest, published within the period of review, have been highlighted as: of special interest of outstanding interest 1. 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Willemse J, Borst JW, de Waal E, Bisseling T, van Wezel GP: Positive control of cell division: FtsZ is recruited by SsgB during sporulation of Streptomyces. Genes Dev 2011, 25:89-99. 29. Rodrigues CDA, Harry EJ: The Min system and nucleoid occlusion are not required for identifying the division site in Bacillus subtilis but ensure its efficient utilization. PLoS Genet 2012, 8:e1002561. 30. Leisch N, Verheul J, Heindl NR, Gruber-Vodicka HR, Pende N, den Blaauwen T, Bulgheresi S: Growth in width and FtsZ ring longitudinal positioning in a gammaproteobacterial symbiont. Curr Biol 2012, 22:R831-R832. A rod-shaped gamma-proteobacterium genetically very similar to E. coli synthesizes its septum parallel to its length axes instead of perpendicular. Consequently, the Z-ring is initially an ellipsoid with a length axe of about 2 mm instead of a circle with a diameter of 1 mm. This observation challenges the present models on FtsZ polymerization. 31. Specht M, Dempwolff F, Schätzle S, Thomann R, Waidner B: Localization of FtsZ in Helicobacter pylori and consequences for cell division. J Bacteriol 2013, 195:1411-1420. 32. Singh B, Nitharwal RG, Ramesh M, Pettersson BMF, Kirsebom LA, Dasgupta S: Asymmetric growth and division in Mycobacterium spp.: compensatory mechanisms for nonmedial septa. Mol Microbiol 2013, 88:64-76. Using GFP-FtsZ, DAPI, and fluorescent vancomycin to detect peptidoglycan growth, the asymmetric division of Mycobacteria is analyzed. It appears that this species segregates the two daughter chromosomes after the septum synthesis is initiated and that it compensates for the asymmetric division by unequal polar growth. 33. Joyce G, Williams KJ, Robb M, Noens E, Tizzano B, Shahrezaei V, Robertson BD: Cell division site placement and asymmetric growth in mycobacteria. PLoS ONE 2012, 7:e44582. Using fluorescent proteins fusions to determine peptidoglycan growth and septum placement these authors conclude that the Z-ring is placed at mid cell but that the daughter cells grow at different speed. The length of the bacterium at which the Z-ring is positioned seems not to be relevant. 34. Donovan C, Schauss A, Krämer R, Bramkamp M: Chromosome segregation impacts on cell growth and division site selection in Corynebacterium glutamicum. PLoS ONE 2013, 8:e55078. 35. van der Ploeg R, Verheul J, Vischer NOE, Alexeeva S, Hoogendoorn E, Postma M, Banzhaf M, Vollmer W, den Blaauwen T: Colocalization and interaction between elongasome and divisome during a preparative cell division phase in Escherichia coli. Mol Microbiol 2013, 87:1074-1087. MreB and PBP2 are shown to localize simultaneously at mid cell together with the Z-ring. The peptidoglycan transpeptidases PBP2 and PBP3, essential for elongation and division, respectively are shown by FRET to directly interact exclusively at mid cell. 39. Morlot C, Zapun A, Dideberg O, Vernet T: Growth and division of Streptococcus pneumoniae: localization of the high molecular weight penicillin-binding proteins during the cell cycle. Mol Microbiol 2003, 50:845-855. 40. Fenton AK, Gerdes K: Direct interaction of FtsZ and MreB is required for septum synthesis and cell division in Escherichia coli. EMBO J 2013 http://dx.doi.org/10.1038/emboj.2013.129. Site directed mutagenesis confirms that MreB interacts with FtsZ and that this interaction it is essential for septum formation. 41. Goley ED, Yeh Y-C, Hong S-H, Fero MJ, Abeliuk E, McAdams HH, Shapiro L: Assembly of the Caulobacter cell division machine. Mol Microbiol 2011, 80:1680-1698. An excellent detailed study on the timing of the localization of many proteins involved in cell division in C. crescentus. 42. 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