Directions for Use Rapid RNA Gel Running Buffer, 10X Code Description Size 1B1373-500ML Rapid RNA Gel Running Buffer, 10X 500 mL General Information VWR Life Science AMRESCO’s Rapid RNA Gel Running Buffer, 10X is a direct replacement for MOPS buffer, which is typically used in denaturing formaldehyde RNA gels. It is specially formulated to allow application of higher voltages during electrophoresis without causing overheating or gel distortion. RNA can be resolved twice as fast without adding any additional protocol steps or new equipment purchases. Faster gel results Easy-to-use replacement for standard MOPS buffer Storage/Stability Store at room temperature (18 to 26°C). Product Use Limitations For research use only. Not for therapeutic or diagnostic use. AMRESCO, LLC Corporate Headquarters, 28600 Fountain Parkway, Solon, OH 44139 Directions for Use Protocol/Procedure Caution: Formaldehyde is toxic. Prepare formaldehyde gels in a fume hood to avoid inhalation and wear appropriate protective equipment. Preparation of Formaldehyde RNA Gel (100 mL) 1. Suspend agarose (1 – 2%) in 88.2 mL deionized water in a 250 mL conical flask. 2. In a microwave oven, heat the above mixture to a boil until the agarose has dissolved completely. USE CAUTION, MIXTURE IS EXTREMELY HOT! 3. Let solution cool to 60 – 70°C and then add 10 mL of Rapid RNA Gel Running Buffer, 10X and mix thoroughly. 4. Carefully add 1.8 mL of 37% formaldehyde and mix thoroughly. 5. Pour the melted agarose into a horizontal agarose gel casting unit and insert comb. 6. Prepare 1X Rapid RNA Gel Running Buffer by diluting 1 part Rapid RNA Gel Running Buffer, 10X with 9 parts nuclease-free water. 7. After the gel has completely solidified, remove the comb and completely submerge the gel in 1X Rapid RNA Gel Running Buffer. 8. Mix RNA samples with RNA loading buffer. 9. Heat denature samples for 10 minutes at 65°C. 10. Load samples into wells and run gel in 1X Rapid RNA Gel Running Buffer at 15 – 18 V/cm until sufficient separation has been achieved. AMRESCO, LLC Corporate Headquarters, 28600 Fountain Parkway, Solon, OH 44139 Directions for Use Frequently Asked Questions Questions Answers Why do I see smears/or no RNA on my gel? 1. RNase contamination in samples, prepare fresh RNA. 2. Smears may result from overloading, load < 30 µg RNA. 3. No RNA – not enough sample loaded or impure RNA is not quantitated correctly. 4. No RNA – diffusion, image immediately after electrophoresis. 5. RNA ran off gel, use shorter run time. 6. Insufficient staining. Is a gel run with Rapid RNA Gel Running Buffer compatible with Northern Blotting? Why didn’t my RNA leave the loading well? Yes 1. Improper well formation. Pour a new gel and repeat. 2. Overloaded RNA. Load < 30 ug RNA. For Technical Support Toll Free: 1-800-610-2789 (USA & Canada) Fax: (440) 349-0235 Email: [email protected] AMRESCO, LLC A VWR Company Corporate Headquarters 28600 Fountain Parkway Solon, Ohio USA 44139-4300 Tel: 440/349-1199 Fax: 440/349-1182 www.amresco-inc.com Rapid RNA Gel Running Buffer, 10X ZY0697 Rev. 1 01/2016 © Copyright 2010 by AMRESCO, LLC All Rights Reserved. AMRESCO® is a registered trademark of AMRESCO, LLC AMRESCO, LLC Corporate Headquarters, 28600 Fountain Parkway, Solon, OH 44139
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