DNA Structure and Replication Structure of DNA DNA is composed of a two strands of nucleotides each containing a deoxyribose sugar, a phosphate, and a nitrogenous base These structures then twist together to form a double helix shape like a twisted ladder Structure of DNA Structure of DNA The bases of one DNA strand are paired to the bases of the other A purine (2 rings) is ALWAYS paired with a pyrimidine (1 ring) Adenine pairs with thymine and guanine pairs with cytosine Structure of DNA Why can’t A bond with C or T with G? Structure of DNA Hydrogen bonds hold the strands together Single hydrogen bonds are weak, but the collective bonding strength of DNA makes it a very stable molecule Structure of DNA The sequence of bases on any one strand of DNA varies greatly between species but the opposite strand will always complement the first strand 5’-ATGCCGTTA-3’ 3’-TACGGCAAT-5’ Structure of DNA The two strands of DNA are said to be antiparallel parallel in opposite directions The direction of the strands are very important when enzymes interact with the DNA as they tend to read or copy DNA in only one direction DNA Replication DNA replication is the process by which a cell makes an exact copy of its DNA The main stages of replication are the same in both prokaryotic (bacteria) and eukaryotic (plant and animal) cells DNA Replication Replication is semiconservative which means that two parent strands are separated and two daughter strands are created using them Hydrogen bonds between the bases break completely allowing the DNA helix to unzip DNA Replication Each of the parent strands acts as a template to create a complementary strand Separating the Strands DNA is separated using the enzyme DNA helicase DNA helicase unwinds the helix by breaking hydrogen bonds between the bases To prevent the bonds from re-forming, proteins binds to the DNA molecule keeping the strands apart Separating the Strands The point where the strands have separated is known as the replication fork The leading strand moves toward the replication fork and the lagging strand moves away from the replication fork Building the Complementary Strands New strands of DNA are synthesized using an enzyme called DNA polymerase III (DNA pol III) DNA pol III links together free nucleotides that are complementary to the template strand Building the Complementary Strands A short piece of single stranded RNA called a primer is attached to the template strand This gives DNA pol III somewhere to start making the new DNA strand DNA pol III only works in ONE direction (5’ → 3’) Building the Complementary Strands The leading strand (towards replication fork) is synthesized continuously during DNA replication The lagging strand (away from replication fork) is synthesized in short fragments that are later joined together - these short fragments are known as Okazaki fragments Building the Complementary Strands The lagging strand requires multiple RNA primers to complete replication These primers are then cut from the lagging strand and replaced by DNA nucleotides using DNA polymerase I (DNA pol I) DNA ligase also is used to link the backbones of the fragments together DNA Repair As new DNA strands are synthesized and new nucleotides are added on, errors can occur DNA pol I and DNA pol III act as quality control checkers by proofreading the newly synthesized strands If there is an error, they will cut it out and replace it with the correct base Repair must occur immediately to ensure it is not passed on Questions Page 666 #1-5, 7
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