Identification of non-parthenogenetic and euploid blastocysts from one pronuclear zygote for embryo transfer by single nucleotide polymorphism (SNP) array 1Institute Tan K1, Zhang SP1, Gong F2, Xiong B2, Lu CF2, Lu GX1, Lin G1 of Reproductive & Stem cell Engineering, Central South University;2Reproductive & Genetic Hospital of CITIC-XIANGYA. Changsha, 410078 STUDY QUESTION: One pronuclear (1PN) oocyte has high developmental potential but is routinely excluded for embryo transfer due to its possible parthenogenetic origin and increased risk for aneuploidy. SNP array is now widely used for aneuploidy screening. Could SNP array also help to distinguish parthenogenetic origin of 1PN oocyte? SUMMARY ANSWER: The blastocysts from parthenogenesis (either with or without extrusion of second polar body) exhibit low degree of heterozygosity (below 2%) when compared to blastocysts from normal fertilized oocyte (range from 3.0%-9.35%) after SNP analysis. This characteristic is efficient to select nonparthenogentic embryo for transfer and resulted in normal live birth. WHAT IS KNOWN ALREADY: Parthenogenetic stem cell (pSC) lines have unique SNP signature (highly homozygous or pericentromeric homozygous) when compared to stem cell lines derived from normal fertilized zygote (highly heterozygous). But currently no data indicate whether this signature could be translate into preimplantation genetic screen to distinguish parthenogenetic origin for 1PN embryos. STUDY DESIGN, SIZE AND DURATION: This was an experimental study to compare the SNP signature and the degree of heterozygosity of 4 pSC lines and 5 blastocysts from parthenogenesis with 200 normal fertilized embryos, followed by cases report. PARTICIPANTS/MATERIALS, SETTING, METHODS: Small cell samples from 4 pSC lines and 5 parthenogenetic blastocysts were processed for whole genome amplification (WGA) and SNP array analysis. The SNP signature and heterozygosity were analyzed by CNAT 4.0 and compared to previously generated SNP data of 200 blastocysts. The established criteria were utilized for 8 1PN blastocysts for selection. MAIN RESULTS AND THE ROLE OF CHANCE: The typical homozygous distribution patterns were not observed in pSC lines and parthenogenetic blastocysts under the detection of low density SNP array after WGA, but the samples from parthenogenesis have reduced rate of heterozygosity, range from 0.5~1.5%, when compared to 3.0~9.35% of 200 normal fertilized blastocysts. Thereafter, 8 1PN-derived blastocysts were analyzed by SNP array to determine the chromosomal constitution and the rate of heterozygosity for transfer. Two highly homozygous and diploid blastocysts were identified and further validated by imprinted gene expression to be parthenogenesis, which indicates that 1PN oocytes may originated from parthenogenetic activation with the extrusion of second polar body and undergo diploidization in subsequent cleavages. To date, one blastocyst confirmed to be normal were transferred and resulted in a healthy birth. LIMITATIONS, REASONS FOR CAUTION: The clinical value for identification of 1PN-derived embryos resulted from parthenogenesis by SNP array needs to be further validated by larger sample size. WIDER IMPLICATIONS OF THE FINDINGS: Our result suggested a new application of SNP array for preimplantation genetic screen. STUDY FUNDING/COMPETING INTEREST(S): National Science foundation of China 81222007.The authors have no competing interests to declare. TRIAL REGISTRATION NUMBER: Not applicable. KEYWORDS: one pronuclear zygote, single nucleotide polymorphism, Parthenogenesis, loss of heterozygosity, preimplantation genetic screening The CN state and the LOH result of 2 1PN blastocysts. (a,c) CN states, (b,d) LOH probability. The left blastocyst originate from normal fertilization but has lost of chr11(Arrow). Although the right blastocyst has normal CN state, the clear of the hetersplashes indicate of the homozygosity.
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