runview NEW For combs and accessories, see page 8 Base unit with integrated power supply runVIEW is an innovative new system which can be used to maximise the efficiency of DNA recovery from runSAFE, EtBr and SYBR stained gels by minimising the number of steps involved in post electrophoretic purification. runVIEW consists of an multiSUB CHOICE gel chamber with special bluVIEW lid, containing an orange spectral emission filter within its viewing pane, plus a base unit with integrated power supply and blue LED gel illuminator. Simple DNA recovery Using runVIEW for gel-free DNA recovery is simple: 1. Cast a gel with two identical rows of wells using one of the matching pairs of 3mm combs supplied. Transfer to the tank, remove the combs, and add buffer just to cover the gel and fill the wells. Load DNA (‘loading tier’). 2. Replace the lid and apply the power. Turn on the blue LED and see the DNA samples migrate in real-time. 3. When the DNA bands of interest enter the second row of wells (‘extraction tier’), stop the power, remove lid and harvest the DNA by pipette. Once the DNA bands of interest enter the ‘extraction’ tier, simply stop the power supply, remove the lid and harvest the DNA by pipette. Extraction fan ensures clear viewing area, free from condensation runVIEW tank with bluVIEW lid Track DNA without harmful UV Biocom “run” Blue light is safe and has none of the detrimental effects of UV transillumination, including mutagenesis which can compromise cloning efficiency, while runVIEW’s capacity to provide real-time visualisation of electrophoresis enables DNA to be tracked as it migrates through the gel. This allows the user to judge precisely when the band of interest is ready for extraction. series represents Save on time-consuming gel elution techniques Running DNA into a well containing buffer effectively purifies the DNA of agarose, eliminating the need for timeconsuming gel excision and purification techniques that also result in sample loss. Once harvested, the DNA needs only to be cleaned by a straightforward ethanol precipitation when it is ready for further digestion or ligation. No expensive commercial gels runVIEW works with standard EtBr, SYBR Green and SYBR Safe gels cast within the 15x7, 15x10 or 15x15cm CHOICE gel trays, and therefore does not require expensive precast gels and accessories. a safer alternative to the use of UV irradiation and ethidium bromide, both of which are known to have harmful mutagenic effects. A self-contained system The base unit, which houses the in-built power supply and blue LED gel illuminator, is compact, dual-voltage and portable, and allows electrophoresis, gel visualisation and extraction to be performed at the bench, without the inconvenience of having to transport gels to a darkroom elsewhere within the laboratory. REAL-TIME GEL ELECTROPHORESIS Blue LED gel illuminator Typical Applications Real-time size fractionation and recovery of nucleic acids runVIEW and runDOC, see pages 16, 17 15 REAL-TIME GEL ELECTROPHORESIS runview • Power supply integrated within the base unit – adjustable in precise 1V or 1mA increments to a maximum 150V or 300mA constant voltage or current output; timer function to 999 minutes for extended runs • Specialist combs for specialist applications double-sided 1mm preparatory combs (1-/2-sample and 4-/16sample standard) included for nucleic acid recovery, plus four multichannel compatible 20/28-sample combs for rapid screening of nucleic acids from 96-well thermal cycler blocks and microtitre plates. Extra thick 3mm preparatory combs also included for enhanced DNA recovery • Upgrade to real-time existing MSCHOICE users may customise their system by purchasing the base station and bluVIEW lid • Versatile - power supply and gel illuminator may be used with other gels and electrophoresis systems After gel pouring and sample loading, simply lift and position the runVIEW tank with bluVIEW lid within the base unit • COMPREHENSIVE – INCLUDES EVERYTHING* REQUIRED TO PERFORM HORIZONTAL REAL-TIME GEL ELECTROPHORESIS • CONVENIENCE – COMBINES THE HIGH RESOLUTION CAPABILITY WITHIN A SINGLE COMPACT BENCH TOP UNIT • VISIBILITY – EXTRACTOR FAN IN LID ELIMINATES CONDENSATION, TO ALLOW • OPTIONAL GEL DOCUMENTATION SYSTEM FITS DIRECTLY OVER THE BASE UNIT AND GEL TANK FOR IMAGING AT THE END OF THE ELECTROPHORESIS RUN • VALUE – COSTS 30-50% LESS THAN INDIVIDUAL COMPONENTS; GEL TANK, POWER SUPPLY AND TRANSILLUMINATOR REAL-TIME OBSERVATION OF BAND MOVEMENT runVIEW Viewing Hood Technical Specifications runVIEW Viewing Base Unit Blue Light Wavelength 470nm Voltage / Resolution 25-150V / 1V Current / Resolution 300mA / 1mA Power 30W Operating Mode Constant Voltage or Current Timer Safety Device Operating Temperature Dimensions Rated Voltage 1-999 minutes with alarm No load detection Ambient to 40°C 29 x 22 x 8cm 100-240V, 50/60Hz runVIEW Gel System Gel Dimensions (W x L) runVIEW Lid Design 15 x 7, 15 x 10 & 15 x 15cm VLID1 - bluVIEW lid - bluVIEW lid – Amber (runSAFE & SYBR stains); Built-in extractor fan powered by base unit Unit Dimensions (W x D x H) Combs 500ml Comb Thickness 26.5 x 17.5 x 9cm 2 x extra thick 3mm preparatory combs double sided, 4 & 16MC and also 20/28MC. 2 x 1mm doubled sided combs, 4 & 16MC and 4 x double sided combs 20 & 28MC 1mm, 3mm Buffer volume ORDERING INFORMATION RVMSCHOICE7 RVMSCHOICE10 RVMSCHOICE15 RVMSCHOICETRIO RVSTATION RVBSBVLID RVLID1 RVLID2 RVHOOD 16 runVIEW System complete with 15 x 7cm gel tray, one set of casting dams and 8 combs runVIEW System complete with 15 x 10cm gel tray, one set of casting dams and 8 combs runVIEW System complete with 15 x 15cm gel tray, one set of casting dams and 8 combs runVIEW System complete with 15x7cm, 15x10 & 15x15 gel trays, one set of casting dams and 8 combs runSTATION complete with RVGELDOC and RVMSCHOICETRIO MS15-1/2-1 Comb 1 & 2 sample, 1mm thick runVIEW Base Station & bluVIEW Lid MS15-4/10MC-1 Comb 4 & 10MC sample, 1mm thick runVIEW bluVIEW lid - Orange (EtBr), optional runVIEW bluVIEW lid - Amber (runSAFE), standard MS15-20/28MC-1 Comb 20 & 28MC sample, 1mm thick MS15-4/2M-3 Comb 4 sample 2 Marker, 3mm thick runVIEW Viewing Hood MS15-6/2M-3 Comb 6 sample 2 Marker, 3mm thick *except chemicals and reagents GEL DOCUMENTATION runDOC runDOC is a portable, lightweight gel documentation system designed exclusively for use with runVIEW. runDOC comprises a darkroom hood and a high resolution digital camera to capture images of nucleic acid gels stained with EtBr, SYBR and runSAFE. Its 12.1 megapixel camera with 2GB memory card allows storage of images in RAW and JPEG formats. Hood is positioned over the runVIEW tank and base unit to create a light-tight environment suitable for image capture The runDOC darkroom is placed quickly and easily over the runVIEW gel tank located on the runVIEW base unit, which includes an integrated power supply and blue LED gel illuminator. The blue LED illuminator provides the excitation source for the DNA gel located within the tank, and following excitation the light emitted is then visualised using either one of the bluVIEW lid options (supplied and used with the runVIEW gel tank) or the runDOC filter slide. The interchangeable filter slide and bluVIEW filter options offer full flexibility: amber filter for runSAFE, SYBR and green fluorescence; and orange filter for EtBr and red fluorescence. runDOC may be also used like an ordinary gel documentation system - by placing the gel tray directly on the runVIEW base station, which acts as a transilluminator. runDOC is available as a complete system with laptop and software. NE W runSAFE • runSAFE – general purpose stain for DNA ranging from 50bp markers to large super-coiled plasmid • runSAFE-PLUS500 – for DNA larger than 500bp in size; CAMERA TYPE 5X OPTICAL / 4X DIGITAL ZOOM 12.1MP EFFECTIVE PIXELS 640X480 UP TO 4000X3000 IMAGE SIZE SENSOR 1/1.7” TYPE HIGH SENSITIVITY CMOS RAW, JPEG FILE FORMAT COMPUTER INTERFACE USB 2.0 HI-SPEED (MINI- B-JACK) VIDEO OUT NTSC / PAL 8GB SD MEMORY CARD STORAGE MEDIA LENS 6.1-30.5 MM FOCAL LENGTH MAXIMUM APERTURE F/1.8(W)-F/2.9(T) 15-1/4000S SHUTTER SPEED EMISSION FILTER OPTIONS ORANGE FILTER FOR ETBR; RUNDOC FILTER SLIDE AMBER FILTER FOR SYBR AND RUNSAFE BLUVIEW-ORANGE FOR ETBR; BLUVIEW LID OPTIONS* BLUVIEW-AMBER FOR SYBR AND RUNSAFE DARK ROOM CAMERA HOLDER MATERIAL POLYOXYMETHYLENE (POM) DARKROOM MATERIAL EBONY ACRYLIC DIMENSIONS / WEIGHT 40X34X19.5CM (HXWXD) / 0.8KG POWER RECHARGEABLE LI-ION BATTERY AND PLUG-IN CHARGER OPTIONAL MAINS CABLE CHARGER *ONLY WITH RUNVIEW runSAFE Range - Less DNA damage, improved cloning efficiency Plasmid PCR Products • SAFE – ALL FOUR RUNSAFE STAINS HAVE ULTRA-LOW TOXICITY (LC>5000MG/KG) AND LACK CELL PERMEABILITY 10000 1000 • CONVENIENT – CFU The runSAFE Range comprises four non-mutagenic stains that produce instant visualisation of DNA bands upon irradiation with blue light or UV in agarose or polyacrylamide gels. Each stain is conveniently supplied in a 6x loading dye which is mixed with 5 parts double-stranded DNA before loading onto an agarose or polyacrylamide gel. The individual colour constituents within each loading dye track electrophoresis run progression, and indicate the extent of band separation and resolution by comigrating with DNA bands of known molecular size, which varies according to the gel percentage. All four stains are non-toxic, safe for the environment and can be disposed of in the regular laboratory waste without using expensive decontamination methods. Each stain is sensitive and binds DNA to detect as little as 0.2ng DNA per band within a gel; while gel imaging is best performed using the amber emission filter found of the bluVIEW lid or runDOC filter slide. The runSAFE Range comprises the following: Technical Specifications 100 Blue LED System 10 0 15 30 45 Exposure Time (sec) 60 120 Slower migrating species, indicative of a linear or relaxed circular vector, resulting from DNA nicking or strand breaks, are significantly reduced in DNA plasmid mixed with runSAFE and exposed to blue light. The concentration of nicked DNA plasmid increases significantly after 8’ of exposure to EtBR and UV irradiation. • runSAFE-2000 – for DNA vectors and inserts ranging from 500-2000bp; • runSAFE-500 – for small DNA fragments, PCR products, sequence tracts and primers less than 500bp. EACH STAIN IS SUPPLIED AS A READY TO USE 6X LOADING DYE; SIMPLY ADD 1 PART STAIN TO 5 PARTS DNA, MIX AND LOAD YOUR GEL • FAST – NO TIME-CONSUMING POST-STAINING OR DE- STAINING OF GELS IS REQUIRED. • SENSITIVE – VERY LOW BACKGROUND STAINING OF THE GEL; DETECTS AS LITTLE AS 0.2NG DNA PER BAND • FLEXIBLE – USED WITH EACH STAIN MAY BE OR UV LIGHT BLUE ORDERING INFORMATION RVGELDOC-F2 Amber Filter for runDOC (runSAFE and SYBR stains) runVIEW Gel Documentation Hood with 12.1MP camera CAMCHARGER Optional Mains Charger Cable for 12.1MP camera runVIEW Gel Documentation Hood with camera, laptop RVSTATION runSTATION complete with RVGELDOC and RVMSCHOICETRIO & 1D Analysis Software RVGELDOC-F1 Orange Filter for runDOC (Ethidium Bromide) RVGDCOMPLETE runVIEW Package including RVGELDOCSYS and RVMSCHOICETRIO runSAFE Description Tracking Dyes Size Range RUNSAFE runSAFE Stain, 1ml Bromophenol Blue, Xylene Cyanol FF, Orange G 50bp – 20Kb RUNSAFE-PLUS500 runSAFE-PLUS500 Stain, 1ml Bromophenol Blue, Xylene Cyanol Blue >500bp RUNSAFE-2000 runSAFE- 2000, 1ml Xylene Cyanol Blue, Orange G 500-2000bp RUNSAFE- 00 runSAFE-500, 1ml Orange G <500bp RVGELDOC RVGELDOCSYS 17
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