Cuticle Affects Calculations of Internal CO2 in Leaves Closing Their Stomata Jun Tominaga1,2 and Yoshinobu Kawamitsu1,* 1 Regular Paper Faculty of Agriculture, University of the Ryukyus, Okinawa, 903-0213 Japan The United Graduate School of Agricultural Science, Kagoshima University, Kagoshima, 890-8580 Japan 2 *Corresponding author: E-mail, [email protected]; Fax, +81-98-895-8734. (Received April 19, 2015; Accepted July 18, 2015) Analyzing the assimilation rate (A) relative to the CO2 concentration inside leaves (Ci) has been a useful approach for investigating plant responses to various environments. Nevertheless, there are uncertainties in calculating Ci when stomata close, restricting the application. Here, A–Ci curves were traced in sunflower (Helianthus annuus L.) leaves using a method for directly measuring Ci. The method was incorporated into an LI-6400 open gas exchange system, and stomata were closed by feeding 10 mM ABA through petioles. The conductance to CO2 was derived from the directly measured Ci and compared with the conductance from the water vapor flux (i.e. the standard calculation). When stomata were open, measured and calculated Ci gave similar A–Ci curves. When stomata were closed, the curves differed because measured Ci departed from the calculated value. This difference caused the calculation to trace an artifactual limitation of photosynthesis. The direct measurement avoided this problem and followed the curve for leaves with open stomata. Largely because of the cuticle, the calculation overestimated CO2 entry into the leaf because the cuticle transmitted more water vapor than CO2, and the calculation relied on water vapor. Consequently, the standard calculation gave conductances larger than those from directly measured Ci. Although the cuticle conductance to water vapor remained constant as stomata closed, it increasingly contributed to the overestimation of Ci. The system provided here is not affected by these cuticle properties and thus is expected to open up the opportunity for A–Ci analysis in plant physiology. Keywords: ABA Gas exchange Helianthus annuus L LI6400 Photosynthesis Stomata. Abbreviations: A, assimilation rate; Ca, ambient CO2 concentration; Ci, CO2 concentration inside leaves; Ci(c), calculated Ci; Ci(m), directly measured Ci; E, transpiration rate; gbw, boundary layer conductance to water vapor; gCO2, conductance to CO2; gCO2(c), gCO2 estimated with property of conductance to water vapor; gCO2(m), gCO2 calculated from Ci(m); gcw, cuticle conductance to water vapor; gsw, stomatal conductance to water vapor; gsw0 , strict sense of stomatal conductance to water vapor; gw, conductance to water vapor; IRGA, infrared gas analyzer; PPFD, photosynthetic photon flux density. Introduction In leaves of terrestrial plants, most gas exchange with the atmosphere depends on diffusion through stomatal pores. Diffusion is a passive physical process and can be regulated when stomata open or close. Closure prevents excessive amounts of water diffusing outward, but at the same time hinders CO2 diffusing inward because the stomata are the common gates for both gases. This leads to a decrease in the CO2 inside leaves (Ci) and a diminished rate of photosynthesis due to a shortage of substrate. The photosynthetic CO2 response curve in which assimilation (A) is determined as a function of Ci, namely the A–Ci curve, has been widely used to assess photosynthetic performance in various environments. Because the Ci is a result of diffusion already passed through stomata, changes in the curve must indicate non-stomatal limitation of photosynthesis (Boyer 1971, Farquhar and Sharkey 1982, Graan and Boyer 1990). The method allows the limitations on photosynthesis to be analyzed separately from stomatal effects; however, to trace the curve correctly, the Ci needs to be determined accurately. Basically, Ci is routinely calculated from the outward diffusion of water vapor (Moss and Rawlins 1963, Jarman 1974, von Caemmerer and Farquhar 1981, Boyer and Kawamitsu 2011). The calculations assume a common gas phase path for CO2 and water vapor (i.e. stomata). However, there is evidence that both gases can move across the cuticle although at a lower rate than through stomata (Boyer et al. 1997, Boyer 2015). This can potentially bias the calculation (Boyer et al. 1997, Meyer and Genty 1998, Boyer 2015). Patchy stomatal closure (Terashima et al. 1988, Mott 1995) also might be a problem because the calculations assume a uniform distribution of stomatal apertures (Buckley et al. 1997). The calculations become more affected as the stomata close because these influences increase accordingly. While stomata are open, the calculation appears reasonably accurate. Sharkey et al. (1982) and Boyer and Kawamitsu (2011) measured Ci directly and compared it with that measured with the standard gas exchange parameters. The two measurements were similar for open stomata and the similarity was recently supported when a direct measurement system for Ci was incorporated into a LI-6400 open gas exchange apparatus (Tominaga and Kawamitsu 2015). In the present work, we applied this Plant Cell Physiol. 56(10): 1900–1908 (2015) doi:10.1093/pcp/pcv109, Advance Access publication on 23 July 2015, available online at www.pcp.oxfordjournals.org ! The Author 2015. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists. All rights reserved. For permissions, please email: [email protected] µ µ Plant Cell Physiol. 56(10): 1900–1908 (2015) doi:10.1093/pcp/pcv109 Fig. 1 Ambient CO2 (Ca), measured internal CO2 [Ci(m)] and calculated internal CO2 [Ci(c)] on a leaf with stomata open. A cup was attached to this leaf, but the measurements were simultaneous on the same leaf area. In Ci(c), the data for about 1 min immediately after the change in Ca were removed due to extreme values. Data are typical for six replications. method to sunflower leaves whose stomata were being closed by feeding 10 mM ABA. The results showed that calculated Ci [Ci(c)] departed from measured Ci [Ci(m)] in these conditions. Results Leaves with open stomata To measure Ci directly, the bottom half of the leaf chamber fluorometer (LI-6400-40; Li-Cor) was replaced with a handmade chamber (cup; see the Materials and Methods). The cup enclosed the same cross-sectional area inside the gaskets (2 cm2) as the standard bottom half. While the bottom cup measured CO2 concentration equilibrated with that in the intercellular spaces of the leaf [Ci(m)], the upper half simultaneously measured standard gas exchange parameters and calculated internal CO2 [Ci(c)]. In some experiments, measurements were carried out with the standard bottom half for the chamber, allowing gas exchange through both surfaces of the leaf (free leaf), which contrasted with the cup-attached leaf allowing gas exchange only through the adaxial surface. In the free leaf, only the Ci(c) could be determined. When stomata were open, measured and calculated Ci responded similarly to the change in external CO2 concentration (Fig. 1). The Ci(m) slightly lagged behind the Ci(c). At an ambient CO2 concentration (Ca) of 400 mmol mol1, A was about 25 mmol m2 s1 and the Ci(c) was 280 ± 10 mmol mol1 and slightly higher than the Ci(m) of 268 ± 13 mmol mol1. This indicated that CO2 gradients were present internally due to finite CO2 conductance in the intercellular space (Sharkey et al. 1982). Although the cup-attached leaf would enhance these gradients as it limits the CO2 entry from one side (Parkhurst et al. 1988, Parkhurst and Mott 1990), comparable A–Ci curves were obtained regardless of whether the cup was attached or not (Fig. 2A). A saturated at about 800 mmol mol1 for both measurements, although the free leaf had slightly higher Ci(c) than Ci(m). When the cup was attached, the conductance to water vapor (indicated as gsw in Fig. 2B) was maintained at >70% of that for the free leaf, perhaps because stomata µ Fig. 2 (A) Data of Fig. 1 showing assimilation (A) for the leaf and plotted as an A–Ci curve. Measured internal CO2 [filled circles, Ci(m)] and calculated internal CO2 [open circles, Ci(c)] are indicated for the cup-attached leaf, and for the same leaf area after the measurement with the cup (triangles, Free). (B) Conductance to water vapor (gsw) calculated for the leaf in Fig. 1 using data for Ci(c) (open circles) with the cup attached or the free leaf without a cup (triangles). A representative experiment from three replications is shown. opened wider when the cup suppressed gas exchange from one side (Boyer and Kawamitsu 2011). Similarly to the free leaf, the gsw was diminished as Ca increased above the ambient concentration (Fig. 2B). So, the stomata closed somewhat when CO2 increased. These results confirmed that the equilibrated CO2 in the cup [i.e. Ci(m)] was at the end of the gaseous diffusion path for CO2 and was dominantly controlled by stomata. Also, the cup scarcely altered diffusion into the leaf. Leaves with closed stomata In contrast to leaves with open stomata, Ci(m) differed from Ci(c) when stomata closed (Fig. 3). After the petiole was cut under water, gsw and A dropped as stomata closed temporarily (Fig. 3A). The gsw and A gradually recovered to 90–110% of the original within <2 h. After recovery, ABA was added to the water, and gsw and A dropped similarly but did not recover. Ci(m) also decreased (Fig. 3B), suggesting that CO2 was depleted rapidly by photosynthesis while the photosynthetic demand for CO2 was retained (Lauer and Boyer 1992). The Ci(m) did not 1901 µ µ µ J. Tominaga and Y. Kawamitsu | Internal CO2 measured directly in leaves Fig. 3 (A) Assimilation rate (A) and stomatal conductance for water vapor (gsw) at various times after excising the petiole under water followed by 10 mM ABA to close the stomata. (B) Measured internal CO2 [Ci(m)] and calculated internal CO2 [Ci(c)] when ambient CO2 (Ca) is varied for the leaf in (A). A cup was attached to this leaf, but the measurements were simultaneous on the same area in (A) and (B). Note the large difference in Ci(m) and Ci(c) after ABA was fed. The data for about 1 min immediately after the change in Ca were removed due to extreme values. Data are typical for six replications. respond to the change in Ca as much as in leaves with open stomata (compare Figs. 1 and 3). At the higher Ca range above 900 mmol mol1, Ci(m) hardly followed the further increase in Ca because stomata closed more tightly at the higher Ca (gsw in Fig. 3A). When stomata began to close more tightly, Ci(m) actually became slightly depleted, causing the traces to be skewed (in the inset of Fig. 3B). On the other hand, the Ci(c) continued to increase with increasing Ca (Fig. 3B) and became markedly different from Ci(m). It was also seen that the Ci(c) became erratic as stomata closed. While the leakage of the gas exchange system potentially alters the calculation (Rodeghiero et al. 2007), it could not explain the departure of Ci(c) here (Supplementary Fig. S1). As a consequence of this difference, two distinguishable A– Ci curves appeared when stomata closed (Fig. 4A). The Ci(c) departed from Ci(m) as Ca increased, and the A–Ci(c) curve was far below the original before feeding ABA (Fig. 4A). In contrast, 1902 the Ci(m) gave a curve like that before feeding (Fig. 4A). Similar results were obtained in all replications (n = 10), and the maximum Ci(m) was no more than 200 mmol mol1 when Ca was at the highest (2,000 mmol mol1). Conductance to CO2 [gCO2(m)] could be estimated from the measured Ci and compared with that [gCO2(c)] derived by the water vapor with the standard calculation (see the Materials and Methods). As shown in Fig. 4B, the gCO2(c) was larger than the gCO2(m), but declined with increasing external CO2, suggesting that the stomata still responded to CO2 as for the leaves without ABA treatment. ABA closed stomata to varying degrees (i.e. gCO2) between replications (Supplementary Fig. S2). The depression of the Ci(c) slope became greater when stomata closed more tightly (compare Fig. 4A and Supplementary Fig. S2). In order to confirm that the difference between Ci(m) and Ci(c) was not an artifact of our measurement system, we conducted an experiment with a single leaf in which A–Ci curves µ µ Plant Cell Physiol. 56(10): 1900–1908 (2015) doi:10.1093/pcp/pcv109 µ µ Fig. 4 (A) Data of Fig. 3 plotted as an A–Ci curve. (B) CO2 conductance (gCO2) plotted at various concentrations of ambient CO2 (Ca). Different curves are obtained from directly measured [filled circles, Ci(m)] or calculated [open circles, Ci(c)] concentrations of CO2. Arrows indicate the data before feeding ABA to close the stomata. A representative experiment from 10 replications is shown. were taken (i) on the free leaf with open stomata; (ii) on the same leaf but with cup attached and ABA fed (i.e. cup-attached leaf with closed stomata); and subsequently (iii) on the same but free leaf (i.e. free leaf with closed stomata). Step (ii) was the same as in the previous experiment shown in Fig. 3. When stomata were closed with ABA, A saturated with CO2 at a lower rate (Fig. 5A, +ABA) than when stomata were open (Fig. 5A, –ABA). However, for Ci(c) the saturated rate extended to higher Ci than indicated by Ci(m). The Ci(c) curve led to the misconception that there was non-stomatal limitation of photosynthesis (Fig. 5A, +ABA for free leaf). The Ci(m) curve was superimposed on that for the free leaf with stomata open (Fig. 5A), indicating no non-stomatal limitation of photosynthesis. These results were reflected in the conductances. When stomata closed, both the gCO2(m) and gCO2(c) were lower than the gCO2(c) for open stomata (Fig. 5B). However with stomata closed, gCO2(m) was always lower than gCO2(c) (Fig. 5B). As Ca rose, stomata closed more tightly (Fig. 5B and inset) and eventually became so low that A did not increase despite 2,000 mmol mol1 outside the leaf (Fig. 5A). Note that the µ µ Fig. 5 (A) Comparison of A–Ci curves when stomata are open (–ABA) or closed (+ABA) and the internal CO2 was calculated. Included in the comparison are internal CO2 concentrations directly measured with an attached cup [filled circles, Ci(m) + ABA]. Note that several filled data points lie on top of each other at A of 14 mmol m2 s1. (B) Conductance to CO2 (gCO2) at various concentrations of ambient CO2 (Ca) for the leaf in (A). Data were obtained in a series of measurements for a single leaf (see text). Arrows indicate the data before feeding ABA. A representative experiment from four replications is shown. slope of the Ci(c) curve in Fig. 5A was not depressed after the ABA application (+ABA for free leaf) as much as that shown in Fig. 4A whose stomata closed more tightly. Also, the free leaf illustrated a Ci(c) curve similar to the corresponding cupattached leaf (data not shown). These results confirm the previous experiment showing that ABA closed stomata without changing the A–Ci curve. It further indicates that a substantial problem exists in calculated Ci with closed stomata (Fig. 5A, +ABA). Estimation of cuticle conductance to water vapor According to Boyer et al. (1997) and Boyer (2015), the amount of CO2 moving through the cuticle is much smaller than for water vapor. Consequently, the CO2 can be considered to diffuse essentially through only stomata, while water vapor moves 1903 µ J. Tominaga and Y. Kawamitsu | Internal CO2 measured directly in leaves µ µ Fig. 6 (A) Conductance to CO2 (gCO2) from measured internal CO2 [Ci(m)] or calculated from water vapor flux [Ci(c)] at various concentrations of ambient CO2 (Ca) when stomata were closed with ABA. (B) Cuticle conductance to water vapor (gcw) in (A) calculated from Equation (10). Data are means ± SE (n = 10). through the cuticle plus stomata. Expressing the difference between the calculated and measured conductances to CO2 thus approximates the cuticle conductance to water vapor as shown in Equation (10). In agreement, the gCO2(c) was consistently larger than the gCO2(m) by, on average, 10–40% over the range of Ca (Fig. 6A). Assuming that the difference of conductance to CO2 resulted solely from the cuticle component, the cuticle conductance to water vapor (gcw) estimated from Equation (10) ranged from 5 to 9 mmol m2 s1 in most of the Ca range except 30 mmol m2 s1 at the lowest Ca of 30 mmol mol1 (Fig. 6B). At the lowest Ca, the gCO2(m) decreased to some extent while the gCO2(c) did not. It was probable that small errors in the measurement of Ci(m) (e.g. leakage) contributed to the larger gcw at the lowest Ca. In turn, we incorporated the gcw values to correct Ci(c) and test if the correction would allow Ci(c) to approach Ci(m). Generally, corrected Ci(c) approached Ci(m) (Fig. 7). Upon a Ca of >600 mmol m2 s1, however, it gradually became lower than it should be [i.e. lower than Ci(m)]. This was attributed to the gcw which assumed no CO2 transfer across the cuticle [Equation (9)]. Though it was much slower for CO2 to move 1904 Fig. 7 Typical examples of correction for cuticle conductance to water vapor (gcw) in A–Ci(c) curves. The calculation was corrected with the estimated gcw at each measurement by estimating the strict sense of stomatal conductance to water vapor (gsw0 ) according to Equation (6). (A) Data for Fig. 4A and (B) another experiment are shown. The corrected Ci(c) gradually became lower than the Ci(m) as ambient CO2 (Ca) increased. across the cuticle than for water vapor (Boyer 2015), CO2 must be forced into the leaf through the cuticle to some extent as the external concentration increased. This created overcorrection of conductance for CO2. In fact, decreasing gcw values down to approximately 9 % gave a closer approximation of Ci(m). Discussion Diffusion of CO2 and water vapor in leaves In this work, the CO2 concentration inside leaves was directly measured as well as calculated by the standard method from the water vapor flux. The measurements were simultaneous on the same leaf area and made in a commercially available open system for determining the gas exchange of leaves. The system was slightly modified to include the direct measurement and, by making determinations on the same area of leaf, a close comparison was possible. The data showed that the internal CO2 became progressively different in the two measurements as open stomata began to close. Plotting the assimilation Plant Cell Physiol. 56(10): 1900–1908 (2015) doi:10.1093/pcp/pcv109 against the internal CO2 concentration (A–Ci curve) gave different conclusions. Leaves with closed stomata either had no change in photosynthetic capacity [A–Ci(m)] or had a large change [A–Ci(c)]. This created a problem for interpreting gas exchange measurements. It suggests that great caution should be used when measuring A–Ci curves on leaves with closing stomata. Importantly, both methods gave essentially the same A–Ci curve when stomata were open. Generally, the standard calculation considers stomata as the dominant path for CO2 and water vapor (Moss and Rawlins 1963, von Caemmerer and Farquhar 1981). While this can be essentially true when stomata are open, water vapor and CO2 also move through the cuticle. The CO2 moves slowly, probably because it has to move through the water in the epidermal cells in addition to cuticle wax before entering the intercellular spaces of the leaf. In contrast, water moves only through the waxes and is more rapid (Boyer 2015). As a result, basing the standard calculation on water movement overestimates CO2 entry. It is proposed that the differences in Ci(m) and Ci(c) as well as the differences in gCO2(m) and gCO2(c) are attributable to this difference in cuticle transport. The values for the cuticle conductance to water vapor were calculated from these differences in cuticle transport and were 5–30 mmol m2 s1, i.e. comparable with those reviewed by Kerstiens (1996) for 200 plant species. Because the method involved cup attachment, it could be used only with amphistomatous species, but may be an alternative to conventional sealing methods (Tominaga and Kawamitsu 2015). In dehydrating leaves, water transport across the cuticle decreased when leaf water potentials decreased (Boyer et al. 1997, Burghardt and Riederer 2003). Boyer (2015) recently found that the cuticle tightened when turgor was lost and the leaf shrank at these low potentials. The permeability diminished for both CO2 and water, suggesting that anything affecting stomatal closure and in turn leaf turgor will affect cuticle properties. This was not the case for the present study as stomata were closed by ABA alone (i.e. without associated reductions in leaf water potential or turgor), which is consistent with the constant gcw at various Ci (Fig. 6B). Any other factor affecting the calculated or directly measured conductances might cause them to differ in Equation (10). Because the conductance to CO2 in the intercellular airspace is finite, vertical gradients of CO2 must be present in a leaf. As a result, the Ci(m) may be lower than the actual one. We tested this possibility using sunflower leaves with stomata open, and estimated the conductance of the mesophyll to be 1,200 mmol m2 s1 (Tominaga and Kawamitsu 2015). This is large compared with the other conductances controlling CO2 diffusion into the leaf and suggests that Ci(m) was only slightly lower than the actual value in the free leaf (Fig. 2). Because the gradients must be created by the mesophyll assimilation activity that in turn was affected by the substrate concentration, it gradually disappeared as Ci decreased. The standard calculation also assumes lateral uniformity over the leaf surface (i.e. uniform stomatal aperture, leaf temperature and metabolic capacity) and in the leaf (i.e. uniform CO2 distribution). Patchy stomatal closure would diminish this uniformity (Terashima et al. 1988, Buckley et al. 1997, Meyer and Genty 1998). Internal water vapor is assumed to be nearly saturated (i.e. uniform) regardless of stomatal apertures (Farquhar 1978). In contrast, CO2 diffuses so little through the cuticle that it may be considered to move into leaves almost entirely through stomata. Given patchy stomatal closure, internal CO2 may not be distributed uniformly inside the leaf [CO2 diffusion would be restricted in the lateral direction (Terashima et al. 1988, Terashima 1992, Morison et al. 2005)]. Consequently, A would vary from patch to patch depending on the local Ci. Also, leaf temperature [i.e. the factor determining wi in Equation (1)] might not be distributed uniformly over the leaf surface with patchy stomatal closure (West et al. 2005), which potentially would alter the calculation as well. In contrast, the Ci(m) reasonably represented actual A–Ci curves even with severely closed stomata. If patchy stomatal closure occurred, this result could not have been obtained because the Ci(m) would presumably average across patches (i.e. provide a uniform value) while the calculated Ci(c) would not. The lack of change in A–Ci curves with closed stomata most probably suggests that the overestimation was caused by the water transfer across the cuticle (Meyer and Genty 1998) rather than patchiness. It was indeed surprising that a small cuticle conductance can make such a large overestimation in the calculations; however, because the cuticle contributes increasingly to leaf conductances as stomata close, the overestimation was more critical when stomata were closed than when they were open. Barrier against CO2 diffusion Because the cuticle barrier to CO2 diffusion is substantial when stomata close, photosynthesis could not recover to the original rates with elevated CO2 outside of the leaf because the stomata closed more tightly. In order to overcome this problem, Graan and Boyer (1990) used a gas exchange system to increase external CO2 around the leaf to the %-level, allowing CO2 to penetrate the leaf despite closed stomata, whereupon the photosynthetic activity increased. In their experiment, Ca was increased to 3,000 mmol mol1 to recover the photosynthetic rate for ABA-fed leaves. Similarly, we estimated from Equation (8) with minimum gCO2(m) (5–12 mmol m2 s1) that Ca has to increase to 2,300–5,200 mmol mol1 to recover A (25 mmol m2 s1). Saturating A requires still further increases in external CO2 concentration. So far, these high CO2 concentrations cannot be achieved with commercially available gas exchange systems (ADC Bioscientific 2004, Walz 2005, Li-Cor Biosciences 2008). Applications of the system Calculated Ci traced an artifactual non-stomatal limitation of photosynthesis when stomatal conductance to water vapor was low. The problem appears to be caused by including cuticle water loss while scarcely any CO2 is transported through the cuticle. Moreover, the water loss varies when leaf turgor (i.e. water status) varies. Furthermore, the correction for the cuticle water loss seems insufficient unless the property for CO2 transfer is known (Fig. 7). The direct measurement of Ci can avoid 1905 J. Tominaga and Y. Kawamitsu | Internal CO2 measured directly in leaves those complexities. Although the system provided here has the potential to open up the opportunity for A–Ci analysis for plant physiology, it critically relies on the LI-6400 open gas exchange system. A great advantage is its simplicity and availability to many scientists. Its limitations are the leakage, the moderate range of external CO2 concentrations and restriction to hypostomatous leaves. As for the leakage, using a larger chamber (e.g. 2 3 cm chamber) instead of the 2 cm2 fluorometer chamber might moderate the potential effect (Rodeghiero et al. 2007). Materials and Methods Plant material Plant materials were the same as those used for a detailed description of the method (Tominaga and Kawamitsu 2015). Sunflower (Helianthus annuus L. cv. Hybrid sunflower from Kaneko Seeds Co., Ltd.) plants were grown in a glasshouse located in the Faculty of Agriculture, University of the Ryukyus, Okinawa, Japan (26 150 N, 127 45E; altitude 127 m). In December 2013, seeds were germinated in a fertilized seeding soil with 380, 290 and 340 mg l1 of N:P:K (Takii & Co., Ltd.). After 10 d, seedlings were transplanted and grown in 4 liter plastic pots containing a soil mixture consisting of 1 : 1 : 1 soil : peat : sand. The plants were automatically watered three times each day and were fertilized weekly with 500 ml of Hoagland’s nutrient solution composed of 4 mM KNO3, 6 mM Ca(NO3)24H2O, 2 mM MgSO47H2O, 2 mM KH2PO4, 0.5 mM CuSO45H2O, 10 mM MnSO4H2O, 2 mM ZnSO47H2O, 25 mM H3BO3, 0.5 mM H2MoO4 and 0.5 mM Fe(III)-EDTA. Fluorescent light was supplemented when the photosynthetic photon flux density (PPFD) above the plants fell below 800 mmol m2 s1. Daylength in the glasshouse was extended to 15 h to prevent flowering. The day and night temperatures ranged between 17 and 24 C and 13 and 22 C, respectively. Only upper fully expanded leaves (130–180 cm2) from 7to 8-week-old plants were used. Gas exchange systems The gas exchange system was described earlier (Tominaga and Kawamitsu 2015). The entire system resembled that developed by Sharkey et al. (1982) in which leaf gas exchange was measured in the open flow (LI-6400XT; Li-Cor), but included a direct measurement of Ci from Boyer and Kawamitsu (2011) in which Ci was determined in a closed system (Fig. 8A). The latter involved a small cup incorporated into an integrated fluorescence chamber head (LI-640040; Li-Cor) (Fig. 8B). Because the apparatus was also used for the other experiments, we used this small chamber which can be particularly prone to leaks (see below) among the chambers provided by the manufacturer (Rodeghiero et al. 2007). When leaf gas exchange was measured, the cup was attached to the abaxial surface of the amphistomatous leaves, and CO2 in the cup was equilibrated with that in the stomatal pores adjacent to the airspace (i.e. directly inside the abaxial surface). The equilibrated air was gently circulated with a small fan to an infrared gas analyzer (IRGA; LI-840A; Li-Cor) in a closed loop without pulses. The smooth and continuous air movement in the loop led to stable and fast responses of the equilibrated CO2. This helped to retain the fast response and environmental control of the LI-6400 system. While the directly measured internal CO2 [Ci(m)] was continuously traced, normal CO2 and water vapor exchange through the same section of adaxial surface were simultaneously detected in the open gas exchange system, which allowed the internal CO2 to be calculated by the standard method [Ci(c)]. Consequently, both Ci(m) and Ci(c) were obtained in a single measurement with a cup-attached leaf. The CO2 concentration was regulated with pure CO2 in a tank connected to the LI-6400 console and with CO2-free air primarily passed through soda lime. Humidity was controlled by a dew point generator (LI-610; Li-Cor) in the CO2-free air. We modified the system to attain low CO2 concentration (<50 mmol mol 1) according to Li-Cor Biosciences (2010). Both IRGAs for LI6400 and LI-840A were calibrated using the same standard gases. For LI-6400, calibration was performed with 0 and 400 mmol CO2 mol1 air, whereas for LI-840A additional 2,000 mmol CO2 mol1 air was used for the higher CO2 range. 1906 A–Ci curves A–Ci measurements were made using either the cup or the standard bottom half as shown in Fig. 1. After clamping on the leaf, at an ambient CO2 concentration (Ca) of around 400 mmol mol1, photosynthesis and Ci(m) became steady within 40–60 min depending on the leaf. Thereafter, the photosynthesis response to varying Ci was measured. The Ca was lowered stepwise down to 30 mmol mol1 and then returned to 400 mmol mol1 to re-establish the initial steady-state value of photosynthesis. The Ca was then increased stepwise up to 1,400–2,000 mmol mol1. For each curve, 8–10 measurements were made. After steady-state photosynthesis and Ci(m) were achieved at each Ca, which usually occurred within 10–20 min (Fig. 1), standard gas exchange parameters were measured. After these measurements were completed, the standard bottom half was used for measurements every 10 min at each Ca step (free leaf). Steady-state photosynthesis tended to be achieved more rapidly with the standard bottom half (usually within 10 min). After stomatal closure was induced (see below), it required more time for photosynthesis and Ci(m) to reach steady state, especially at higher Ca. Photosynthesis was measured at a PPFD of 800 mmol m2 s1, which was 80–90% saturating for A and prevented photoinhibition by often prolonged measurements. All measurements were carried out at a leaf temperature of 25 C and a leaf to air vapor pressure difference (VPD) of 1.0–2.0 kPa, using a constant flow rate of 250 mmol s1. In the early morning, plants were taken from the glasshouse to the laboratory (room temperature of 25 C). There, plants were illuminated with fluorescent lamps that delivered a PPFD of 150–400 mmol m2 s1 at leaf height. The plants were acclimated under the light at least 1 h before the measurement started. Stomatal closure Stomata were closed by feeding ABA through a petiole. The petiole was excised under degassed water in a 100 ml glass cup, and photosynthesis was measured in the excised leaf. After photosynthesis was recovered and became steady, the stomata were closed by mixing 100 mM ABA with the water in the cup to give a final concentration of 10 mM. The (±)-cis, trans-ABA was purchased from Sigma. The stock solution was made by bringing the pH to 10–11 with KOH to dissolve the ABA, then neutralizing to pH 7 with HCl (Lauer and Boyer 1992). Calculation of photosynthesis parameters and cuticle conductance to water vapor Water vapor conductance (gw) was calculated according to von Caemmerer and Farquhar (1981): gw ¼ Eð1wÞ wi wa ð1Þ where E is the transpiration flux (mol m2 s1), wi and wa are the respective water vapor concentrations of the intercellular spaces inside the leaf and the bulk air outside of the leaf boundary layer, and w is the average water vapor concentration in these two locations (mol mol1). The wi was assumed to be saturating at leaf temperature. The gw would be decomposed as: 1 1 1 ¼ + gw gsw gbw ð2Þ where, in series, gsw and gbw are the stomatal and the boundary layer conductance to water vapor (mol m2 s1), respectively. The boundary layer conductance for each side of the leaf chamber was 4.64 mol m2 s1 (calibrated for the LI-6400-40 chamber by Li-Cor Biosciences 2008). The conductance to CO2 [gCO2(c)] was estimated with the property of conductance to water vapor as: 1 1:6 1:37 ¼ + gCO2ðcÞ gsw gbw ð3Þ where 1.6 and 1.37 are the ratio of diffusivities of CO2 and water vapor in air and in the boundary layer, respectively (von Caemmerer and Farquhar 1981). Analogous to Equation (1), gCO2(c) can be expressed as: gCO2ðcÞ ¼ ðA+cEÞ Ca CiðcÞ ð4Þ Plant Cell Physiol. 56(10): 1900–1908 (2015) doi:10.1093/pcp/pcv109 A B Fig. 8 (A) Schematic diagram of the gas exchange system with internal CO2 (Ci) directly measured. In the cup attached to the abaxial surface, the CO2 equilibrated with that in the stomatal pores adjacent to the airspace, whereas the gas exchange occurs in the open gas exchange system (LI-6400XT; Li-Cor) attached to the adaxial surface. The equilibrated CO2 concentration [i.e. Ci(m)] was measured in the closed loop with the IRGA (LI-840A; Li-Cor) while the micro blower (109P0412H309; Sanyo Denki Co., Ltd.) allowed the air to circulate gently around the loop (300 ml min1). The condenser ensured atmospheric pressure and that the loop path and the cup would be free of condensation. (B) The cup specially designed for the bottom half of an integrated fluorescence chamber head (LI-6400-40; Li-Cor), having a round airspace with 2 mm depth surrounded by the black neoprene gaskets (LI-6400-41; Li-Cor) which shares the same leaf area (2 cm2) with the upper half. Leaf temperature was measured with a fine 0.13 mm chromel–constantan thermocouple (CHCO-005; Omega Engineering) appressed to the underside of the leaf by the flexed stainless wire in the cup. The bypass to the exhaust for the open path allowed matching the two IRGAs during measurements. The approximate total volume of the closed system was 100 ml (including LI-840A) with a total path length of 1.8 m. where A is the CO2 flux (mol m2 s1) and Ca is the CO2 concentration outside of the boundary layer (mol mol1). The cE value represents the interaction of CO2 diffusing into the leaf with water vapor diffusing out to the air (von Caemmerer and Farquhar 1981). The Ci(c) was then given as: gCO2ðcÞ E=2 Ca A ð5Þ CiðcÞ ¼ gCO2ðcÞ +E=2 According to Boyer et al. (1997) and Boyer (2015), water vapor is also transpired through the cuticle, and the influence of cuticle conductance to water vapor (gcw) cannot be neglected as stomata close. The gcw value is included in gsw as: gsw ¼ gsw 0 +gcw ð6Þ 0 where gsw is the strict sense of stomatal conductance to water vapor, and in parallel with cuticle conductance (Jarvis 1971). Substituting Equation (6) into Equation (3) gives: 1 gCO2ðcÞ ¼ 1:6 1:37 + gsw 0 +gcw gbw ð7Þ It should be noted that in Equation (7) the gas diffusivity ratio of 1.6 is applied to the cuticle conductance despite the fact the cuticle is solid. This gives the cuticle effect as the equivalent gas phase conductance in order to examine how the cuticle alters the gas phase calculation of gCO2(c). In contrast to gCO2(c) in Equation (4), the conductance to CO2 [gCO2(m)] was also calculated from the directly measured Ci [Ci(m)] regardless of water vapor flux because the equilibrated CO2 in the cup already experienced the interaction with water vapor (Boyer and Kawamitsu 2011, Boyer 2015): gCO2ðmÞ ¼ A Ca CiðmÞ ð8Þ Although the gCO2(m) contains the cuticle conductance to CO2, the cuticle transmits 1/20th to 1/40th as much CO2 as water vapor (Boyer et al. 1997, Boyer 2015). Assuming that the cuticle conductance to CO2 was negligibly small, the gCO2(m) would be expressed as: 1 1:6 1:37 ¼ + gCO2ðmÞ gsw 0 gbw ð9Þ Considering the large boundary layer conductance in the total conductance to CO2, the last term on the right-hand side of Equations (7) and (9) may be neglected. The boundary layer conductance accounts for 7% of the total conductance to CO2 when gCO2 is 250 mmol m2 s1 (i.e. stomata opened relatively), and <1% when gCO2 is <50 mmol m2 s1 (i.e. stomata closed relatively). Then the difference between the Equations (7) and (9) gives the cuticle conductance to water vapor as: ð10Þ gcw ¼ 1:6 gCO2ðcÞ gCO2ðmÞ Correction for leakage Tests and corrections for the leakage of CO2 and water vapor into and out of the gas exchange apparatus have been applied as described elsewhere (Tominaga and Kawamitsu 2015). Briefly, the chamber was tested for leaks with various sealants in addition to the rubber gasket supplied by Li-Cor, according to Flexas et al. (2007). The effects of neither the sealants nor the cup attachment were indicated, so the rubber gasket was used in further leak tests and in this work. The leakage in the direct Ci measurement system (i.e. closed loop) was separately evaluated by monitoring the CO2 concentration in the closed loop after a CO2 injection. No leak was detected, and the system was considered leak free in this experiment (i.e. no correction for leakage). A leak in the Li-Cor open gas exchange system was corrected by estimating the CO2 and water vapor diffusion molar flow rate, KCO2 and KH2O, respectively, following Rodeghiero et al. (2007). Average values of 0.21 mmol s1 for KCO2 and 2.0 mmol s1 for KH2O were obtained and used in this study. In principle, the leak affects the measurements of fluxes for CO2 and water vapor, depending on the concentration gradients of CO2 and water vapor between inside and outside the chamber. To know these gradients, the concentrations outside the chamber 1907 J. Tominaga and Y. Kawamitsu | Internal CO2 measured directly in leaves were monitored during all the measurements by an open path IRGA (LI-7500; Li-Cor) set around the leaves. The corrections of the fluxes can alter the calculation as in Equation (5), and thus the A–Ci curve (Supplementary Fig. S1). Statistics The number of replications is presented in the figure legends for each experiment. The results are given as means with SDs unless otherwise indicated. All the presented results were already corrected for leakage as described above. Supplementary data Supplementary data are available at PCP online. Acknowledgements We are deeply grateful to Dr. J.S. Boyer who has given us constructive comments and warm encouragement. Without his guidance and persistent help, this paper would not have been possible. Disclosures The authors have no conflicts of interest to declare. References ADC Bioscientific (2011) LCpro-SD Portable Photosynthesis System: Instruction Manual. ADC BioScientific Ltd., Hoddesdon, UK. 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