Eur. J. Phycol. (August 2003), 38: 247 – 256. Photosynthetic field capacity of cyanobacteria of a tropical inselberg of the Guiana Highlands U W E R A S C H E R 1 , M I C H A E L L A K A T O S 2 , B U R K H A R D B Ü D E L 2 A N D U L R I C H L Ü T T G E 1 1 2 Institute of Botany, Darmstadt University of Technology, Schnittspahnstrasse 3 – 5, 64287 Darmstadt, Germany Department of Biology, Botany, University of Kaiserslautern, PO Box 3049, 67653 Kaiserslautern, Germany (Received 16 December 2002; accepted 8 April 2003) Photosynthesis of cyanobacteria is well characterized under laboratory conditions. We present a detailed study of photosynthetic capacity of cyanobacterial communities measured under natural conditions using chlorophyll fluorescence techniques. Cyanobacteria of extensive and diverse communities grow epi- and endolithically on the bare rock of inselbergs in the tropics where they are exposed to extreme and rapid fluctuations in irradiance, temperature and water availability. Extreme and rapidly changing environmental conditions impose various stresses on cyanobacteria and lead to small-scale niches of different communities along the furrows of an inselberg in French Guiana. These different cyanobacterial communities can easily be separated from each other by their species composition. Moreover, cyanobacteria of these zonal areas show significantly different rates of apparent quantum yield of photosystem II (PSII), are differently adapted to utilize early morning light energy and have different strategies to face rapid cycles of desiccation. These different physiological strategies have led to the development of different cyanobacterial communities in distinct zones which are determined by different resistance to dehydration, water transport and storage capacity. In spite of the extreme environmental conditions with very high solar radiation, predawn measurements of potential quantum yield of PS II showed that they are not photoinhibited. We describe the manifold photosynthetic strategies that have developed in cyanobacteria under these extreme and highly fluctuating natural conditions. Key words: biological crust, chlorophyll a fluorescence, cyanobacterial communities, French Guiana, Gloeocapsa, inselberg, light reaction, photosynthesis, quantum yield, Scytonema, Stigonema Introduction Terrestrial cyanobacteria are globally distributed and are found in habitats as various as open rock formations, dry and wet savannas and on the leafsurfaces of higher plants. For example, the open rock surfaces of some inselbergs are coloured by extensive cyanobacterial films and crusts (Büdel et al., 1994, 1997a; Büdel, 1999), which give the inselbergs their characteristic black colour, but were misinterpreted by Alexander von Humboldt in 1849 as manganese oxides. Even though there are no quantitative estimates of the total area covered by cyanobacteria, they undoubtedly play an important role in the net primary production (Medina, 1993; Büdel et al., 2000) and nitrogen input (Forman, 1975; Lüttge, 1997; Freiberg, 1998; Dojani et al., 2001) of tropical ecosystems. Despite Correspondence to: U. Rascher, Columbia University, Biosphere 2 Center, PO Box 689, Oracle, AZ 85623, USA. Tel: + 1 (520) 8385082. Fax: + 1 (520) 8385034. E-mail: [email protected] their possible ecological relevance, however, almost nothing is known about the photosynthetic capacity of terrestrial cyanobacteria in the field (Büdel, 1999). The photosynthetic apparatus of cyanobacteria in general is similar to that described for higher plants, but it has several peculiarities. In addition to chlorophyll in the photosystems, their phycobilisomes with the pigments phycocyanin and phycoerythrin, primarily attached to the photosystem II (PSII) dimers, extend the spectrum of visible light usable for photosynthesis. It is not clear, however, whether the phycobilisomes play a role in protection from surplus irradiance (Campbell & Öquist, 1996). Terrestrial cyanobacteria possess only a small amount of zeaxanthin (DemmigAdams, 1990; Demmig-Adams & Adams, 1992), which must be considered too low to affect heat dissipation significantly (Leisner et al., 1994; Lakatos et al., 2001). However, other pigments, such as canthaxanthin, b-carotene and the myxoxanthophylls, may play an important role in heat dissipation and photoprotection (Ibelings et al., ISSN 0967-0262 print/ISSN 1469-4433 online # 2003 British Phycological Society DOI: 10.1080/0967026031000121679 U. Rascher et al. 1994; Lakatos et al., 2001; Albrecht et al., 2001). Moreover, it is not only the visible, photosynthetically active radiation which stresses the cyanobacteria on open rocks. They are often exposed to large fluxes of ultraviolet (UV) radiation (Büdel et al., 2000) and produce highly effective UV-absorbing compounds, such as mycosporin-like amino acids (MAA) and the indol alkaloid scytonemin, which is deposited extracellularly (Garcia-Pichel & Castenholz, 1991; Karsten & Garcia-Pichel, 1996; Büdel et al., 1997b). High insolation often causes high temperatures on open rock surfaces and favours rapid desiccation of the cyanobacterial mats. However, they are dependent on liquid water for metabolic activity, in contrast to eukaryotic green algae which can utilize water vapour at high relative humidity (Büdel & Lange, 1991; Lange et al., 1989). In addition to high irradiance and temperature, frequent cycles of desiccation and rewetting require stable changes between a physiologically dormant dry and an active wet state (Scherer & Zhong, 1991). This transition can be reliably monitored by chlorophyll fluorescence data (Bilger et al., 1989; Lange et al., 1989, 1999). During desiccation, DF/Fm’ and absolute values for fluorescence yield drop dramatically within a few minutes. Thus, inactivation of photosynthesis induced by desiccation can be clearly distinguished from other types of photoinhibition. Interestingly the frequency and the total quantity of rain differ between the inselbergs of wet and dry savannas. The latter are dominated by cyanolichens as well as green algal lichens and are, thus, often brown-coloured (Büdel et al., 2000). Most photosynthetic studies have been performed under laboratory conditions with isolated and lichenized cyanobacteria (Lange et al., 1989; Demmig-Adams et al., 1990a,b; Campbell et al., 1998; Lange et al., 1998), and we are aware of only two studies characterizing photosynthesis of free-living tropical cyanobacteria under natural conditions in the field (Lüttge et al., 1995; Büdel, 1999). Nowadays portable chlorophyll fluorescence measurement systems allow ecophysiological studies even in extreme habitats such as the open rock formations of tropical inselbergs. For this work we chose an inselberg in the tropical rain forest of French Guiana. The extended open surface of the granite rock outcrops is densely covered by cyanobacteria of high species diversity (Sarthou, 1992; Sarthou et al., 1995). Over the years, flowing water has carved furrows in the granite. Across those furrows, which are typically 1 – 3 m wide and 0.5 m deep, three different zones of cyanobacterial communities can be observed: the central zone of the furrows, an intermediate zone on the lateral slopes of the furrows and the horizontal rock areas above the furrows. These zones are related to different light and water regimes across the 248 furrows and, thus, provide an excellent system to study the ecophysiological strategies of different cyanobacterial communities. In this survey, we give a detailed description of the photosynthetic capacity of cyanobacterial communities of inselbergs under natural conditions in relation to the abiotic factors. The aim of this work is to compare the photosynthetic response of free-living terrestrial cyanobacteria, which are subjected to rapidly changing environmental conditions, with those of cultures, and to investigate the varying ecophysiological strategies which have evolved in cyanobacteria of different microhabitats. Materials and methods Study site and cyanobacterial communities All measurements were conducted on Nouragues inselberg (altitude 411 m; Fig. 1), a 400 ha outcrop of solid granite, located in Les Nouragues national park in the centre of French Guiana close to Les Nouragues field station (48 05’ N, 528 40’ W). The south face (slope 20 – 40%), the so-called terrasse (Fig. 2), is covered by layers of cyanobacterial communities, separated by small vegetation islands (1 – 20 m diameter) mainly dominated by Pitcairnia geysksii and Clusia sp. Mean annual rainfall is 2920 mm, with a dry season from September to October and decreased rainfall in February and March. Detailed descriptions of the study site, the abiotic conditions and the plant species occurring are given by Sarthou (1992), Larpin (1993) and Meer (1995). All measurements presented here were performed in February 1999. To characterize the ecophysiological capacity, three cyanobacterial zones across the furrows were selected. These three communities cover over 90% of the inselberg outcrop and can easily be separated by their colour (Fig. 3). Species collection and identification Different cyanobacterial mats were collected by scraping the cyanobacterial samples carefully off the rock with a knife. Five samples covering an area of approximately 2 cm2 were taken from each community. The samples were dried rapidly over silica gel and stored in a dark container over silica gel during transport to the laboratory. Species identification followed Geitler (1932), Golubic et al. (1981), Anagnostidis & Komárek (1988, 1990), Komárek & Anagnostidis (1989, 1999) and Hoffmann (1991). Identification was performed with crusts mounted in water under a light microscope. Species composition was estimated as percentage cover for each sample. Chlorophyll fluorescence measurements The chlorophyll a fluorescence measurements were performed with a miniaturized pulse-amplitude modulated photosynthesis yield analyser (Mini-PAM, Walz, Effeltrich, Germany). A special holder (Fig. 4), similar to Photosynthesis of cyanobacteria 249 Figs. 1 –8. Study site and dominant cyanobacterial species. Fig. 1. Les Nouragues inselberg in French Guiana. Fig. 2. Aerial view of the bare rock outcrops of the inselberg. The ‘black’ surface colour is caused by a dense layer of cyanobacteria shown here in full sunlight. Measurements were taken at various sites along the furrows. Fig. 3. Close-up of a furrow with the three zones of measured cyanobacterial communities. From left (centre of furrow): ‘red’ (a), ‘green’ (b) and ‘black’ (c) communities; marks indicate measuring spots. Scale bar represents 10 cm. Fig. 4. Special holder for fibre-optics of the Mini-PAM and sensors for light and temperature in the centre of a furrow (‘red’ community). The cyanobacteria around the holder were manually watered, which intensified the characteristic red colour. Figs. 5 – 8. Micrographs of the dominant cyanobacteria. Scale bars represent 20 mm. Fig. 5. Gloeocapsa sanguinea. Fig. 6. Stigonema mammilosum. Fig. 7. Stigonema ocellatum. Fig. 8. Scytonema myochrous. the leaf-clip holder described by Bilger et al. (1995), was gently pressed against the cyanobacterial mats on the rocks, to fix the fibre-optics at an angle of 608 and at a constant distance of 7 mm from the cyanobacteria. A NiCr/Ni thermocouple was placed on the cyanobacterial mat next to the measuring spot to record surface temperature. Irradiance (400 – 700 nm) was measured by the micro-quantum sensor of the Mini-PAM calibrated against a LI-COR quantum sensor (LI-190SA, LI-COR Inc., Lincoln, USA). Potential quantum yield of photosystem II (PSII), Fv/ Fm, was measured in the morning before sunrise, where Fv is maximum variable fluorescence (Fv = Fm – Fo), Fm is maximum fluorescence of the dark-adapted cyanobacteria during a saturating light flash (800 ms, 3000 mmol m72 s71) and Fo is ground fluorescence of the darkadapted organisms. The apparent effective quantum yield of PSII (DF/Fm’) of the light-adapted cyanobacteria was calculated as (Fm’ – F)/Fm’, where F is fluorescence of the light-adapted sample and Fm’ is the maximum light- U. Rascher et al. 250 adapted fluorescence when a saturating light pulse, as described above, is superimposed on the prevailing environmental light levels (Genty et al., 1989; Schreiber & Bilger, 1993; Schreiber et al., 1995). During these measurements, care was taken not to change the ambient conditions, e.g. by shading. Maximum apparent rates of photosynthetic electron transport (ETR) were calculated as 0.5 6 (DF/Fm’) 6 irradiance, where the factor 0.5 accounts for the excitation of both PSII and PSI. Light response curves (Fig. 10B) were fitted by using a twoparameter negative exponential function, f(x) = a(1 – e(-bx)) using Sigma Plot (SPSS Inc., San Rafael, CA, USA). The light reflection factor is not known for cyanobacterial mats, and no correction was made for reflection. In addition different cyanobacteria may vary in their production of extracellular sunblocking pigments, which reduce the photosynthetically effective intracellular radiation, so that intracellular irradiance is not known for cyanobacteria. Consequently only relative ETR values are presented, and data must be interpreted with care. to as the ‘green’ community. A third community, covering more than 80% of the whole rock surface, is found at some distance (normally 4 50 cm) from the furrows in the more or less horizontal rock areas. This community, which is dominated by Scytonema myochrous (Fig. 8), appears deep black regardless of its water status and is referred to as the ‘black’ community. While Scytonema myochrous also occurs along the lateral slopes, this species is dominant only on the horizontal rock areas where it forms dense, bushy mats. Abiotic factors The abiotic conditions to which the cyanobacteria on the open rock outcrops of the inselberg are exposed are among the most extreme found on earth. Irradiance may reach 2600 mmol m72 s71 and the surface temperature of the cyanobacterial mats on the bare rock varies between 22 and 528C during the day (Fig. 9). The decrease in irradiance and surface temperature in the afternoon was due to rainfall, which frequently occurred in the middle of the afternoon. Rapid variations in irradiance were due to fast-moving dense clouds. The surface temperature also did not follow a simple pattern, but fluctuated in relation to rainfall. Results Cyanobacterial communities Three dominant communities composed of different species of cyanobacteria can be found across the furrows of the inselberg (Table 1, Fig. 3). The first community grows in the centre of the furrows. During and after rainfall the cyanobacterial mats are covered by flowing water up to a few centimetres in depth, occasionally with strong current. This community, which is dominated by compact growth forms, like the unicellular, colonybuilding Gloeocapsa sanguinea (Fig. 5) and the short branching species Stigonema mammilosum (Fig. 6), appears reddish in the wet state and will be referred to as the ‘red’ community. The second community covers the lateral slopes of the furrows. This community is dominated by a thick layer of Stigonema ocellatum (Fig. 7) which forms long branching filaments. It appears dark green in the wet, and black in the dry state and will be referred Light dependency of photosynthetic capacity Apparent effective quantum yield of PSII (DF/Fm’) was measured over several days using the chlorophyll fluorescence technique (Fig. 10). The measurements were performed while all communities were in a wet state, but not flooded, so that CO2 diffusion was not limited by liquid water covering the cyanobacterial mats. Special care was taken to obtain the measurements under similar, constant conditions (e.g. variable cloud cover was avoided). Maximum values of DF/Fm’ at low irradiances did not exceed 0.60. With increasing irradiance, DF/Fm’ did not decrease strongly, but declined Table 1. Cyanobacterial species occurring in three zones across furrows at Les Nouragues inselberg Gloeocapsa Scytonema Scytonema sanguinea myochrous ocellatum Central zone of furrows (‘red’ community) Intermediate zone on slopes of furrows (‘green’ community) Horizontal rock areas (‘black’ community) Stigonema ocellatum Stigonema mammilosum Stigonema hormoides Schizothrix sp. Chroococcidiopsis sp. (endolithic) +++ + + + ++ + 7 ++ + ++ + +++ 7 7 + 7 + +++ + ++ 7 + 7 + Symbols: + + + , dominant species (over 50% of cyanobacteria); + + , abundant species (20 – 50% of cyanobacteria); + , occasional species ( 5 20% of cyanobacteria); 7, not found. Photosynthesis of cyanobacteria Fig. 9. Irradiances and surface temperatures measured daily on the inselberg from 15 to 27 February 1999, at the same times and sites where photosynthesis was measured. The decrease in irradiance and temperature in the afternoon was caused by rain, which regularly occurred at this time of the day and year. linearly with a gentle slope (Fig. 10A). This resulted in comparatively high values for apparent effective quantum yield at high irradiances and, therefore, high values for apparent ETR (Fig. 10B). Maximum relative ETR values of 404 and 240 were measured for the ‘black’ and ‘red’ communities, respectively. The ‘red’ community in the centre of the furrows always showed significantly lower DF/Fm’ values than the two other communities of cyanobacteria, which exhibited a similar light dependency of PSII (Fig. 10). DF/Fm’ values varied between 0.15 and 0.40 for the ‘red’ and between 0.20 and 0.55 for the other communities over a wide range of irradiances. Photosynthetic capacity during the morning The activation of photosynthesis during the early morning hours was characterized by measuring a typical morning time course (Fig. 11). Heavy rain had occurred in the evening of the previous day, so that the cyanobacteria were still wet in the morning. Optimal apparent quantum yield (Fv/ Fm) was surprisingly low before sunrise, about 0.2 for the ‘red’ community and 0.4 for the other two communities (‘green’ and ‘black’; Fig. 11B). During dawn apparent quantum yield (DF/Fm’) increased 251 Fig. 10. (A) Apparent effective quantum yield (DF/Fm’) and (B) apparent rates of relative electron transport (ETR) recorded over several days, while the cyanobacterial communities were well wetted after natural rainfall. Symbols indicate independent measurements and lines indicate linear regressions (A) or fitted exponential growth to maximum (B). Filled circles and continuous lines, cyanobacterial community in the centre of the furrows (‘red’ community); open squares and broken lines, cyanobacterial community at the sides of the furrows (‘green’ community); open triangles and dotted lines, cyanobacterial community on top of the vertical rocks, beside the furrows (‘black’ community). showing an activation of photosynthesis, which differed between the communities. At 6:35 hours (irradiance 5 1 mmol m 72 s71), the ‘red’ community displayed reduced photosynthetic efficiency, while the other cyanobacterial mats were already activated. When irradiance reached 10 – 20 mmol m72 s 71 (around 7:00 hours), DF/Fm’ attained maximum values of 0.49, 0.54 and 0.57 for the ‘red’, ‘green’ and ‘black’ communities, respectively. With further increase in irradiance during the morning, DF/Fm’ again decreased and showed the same light-dependent characteristics described above (Fig. 10). Interestingly, PSII could also be activated by artificial light flashes. At 6:10 hours (before dawn; Fig. 11C) and 6:35 hours (during dawn; Fig. 11D), short light pulses (*3000 mmol m72 s 71, duration 0.8 s) were applied once every 30 s. While photosynthesis was still in an inactivated state, DF/Fm’ increased significantly within minutes due to light pulses (Fig. 11C and ‘red’ community only in Fig. U. Rascher et al. 252 Fig. 12. Activation of light reactions by water, measured at one site for each community. Symbols and lines as in Fig. 10. DF/Fm’ was measured every minute; rain water was applied at time 0 and subsequently every minute between the measurements. Care was taken not to apply excess water that might inhibit CO2 diffusion. Irradiances were 549 + 99, 479 + 93 and 488 + 158 mmol m72 s71 during the measurements of the ‘red’, ‘green’ and ‘black’ communities, respectively. Fig. 11. Morning time course of activation of light reactions during sunrise. Symbols and lines as in Fig. 10. (A), (B) Morning time course over 4 h for irradiance and apparent quantum yield. For each community 10 different spots were measured. During this period surface temperature increased from 248C to 318C. Before sunrise ( 5 1 mmol m72 s71) Fv/ Fm is plotted; these points are marked with an asterisk. After 6:45 h, irradiance reached *3 mmol m72 s71, and measurements are noted as DF/Fm’. (C), (D) Additional activation of photosynthesis of one spot by applying saturating light pulses of the Mini-PAM every 30 s simultaneously with the measurements at 6:10 and 6:35 h, respectively. Curves were fitted using a peak equation. 11D). Activation of a similar magnitude was observed while ambient irradiance increased during sunrise (Fig. 11B). The ‘green’ and ‘black’ communities showed high values of DF/Fm’, which did not increase after additional light pulses at 6:35 h (Fig. 11D). Water dependency of photosynthetic capacity Thus far, water supply was considered optimal for the cyanobacteria (Figs. 10, 11). In the following experiments, the influence of water status on DF/ Fm’ was investigated under constant ambient light. Rain water was added to totally desiccated cyanobacteria (without detectable chlorophyll a fluorescence) at time 0 and then again every 60 s. DF/Fm’ was measured before water was added and between each successive addition of water (Fig. 12). All the communities showed a rapid activation of PSII. Before watering, initial values of F and Fm’ were identical. Furthermore, after the initial wetting, both parameters increased threefold yet remained equal (DF/Fm’ = 0). In the following minutes DF/Fm’ increased gradually until maximum values were achieved after 20 – 30 min. The ‘green’ and ‘black’ communities revealed the same kinetics, while the ‘red’ community reached saturation at a lower DF/Fm’. To show the long-term reaction to water supply, 10 different spots for each community were measured every 10 min. Water was applied at time zero and in between the measurements (Fig. 13A). The ‘red’ community saturated at the lowest levels, while there was no significant difference between the ‘green’ and ‘black’ communities under wellwatered conditions (45 – 65 min in Fig. 13B and 0 – 60 min in Fig. 13C). The last water was supplied to the cyanobacteria at 47 min, and decreases in DF/ Fm’ were observed during desiccation (Fig. 13B). Even though water status was not measured directly, it can be deduced from chlorophyll fluorescence data. Despite the fact that the same amount of water was provided to all three communities, photosynthesis of the ‘red’ and ‘black’ communities became inactive almost half an hour earlier than that of the ‘green’ community. A sudden (within minutes) decline in DF/Fm’ to zero (in combination with a similar decline in Photosynthesis of cyanobacteria 253 Fig. 13. Activation and desiccation processes of the three communities after watering. (A) Totally dry cyanobacteria were wetted manually using rain water at time 0 and subsequently every 10 min. DF/Fm’ was measured every 10 min in between two successive watering events. (B) At 47 min (dotted vertical line), the last water was applied to the then totally activated cyanobacteria, and DF/Fm’ was measured every 5 – 10 min. (C) Desiccation was monitored for several hours after heavy rainfall (8 mm), which ended at time 0. After this rain, the furrows were filled with flowing water. Ten different spots were measured in each community. Symbols and lines as in Fig. 10. Significance of differences between pairs of communities indicated by symbols in the upper-left corner of (A) are shown by asterisks (*p 5 0.05; **p 5 0.01; ***p 5 0.001). Irradiance was 1776 + 328 mmol m72 s71 for (A) and (B), and 337 + 199 mmol m72 s71 for (C). absolute fluorescence values) was observed after about 20 min of desiccation, and is thought to indicate inactivation of photosynthesis. This inactivation process was patchy, leaving photosynthetically active spots next to inactive spots, which is reflected in the high standard deviations during the drying process (Fig. 13B; 65 – 90 min). This experimental treatment represented moderate rainfall, which did not provide enough water to fill the furrows. The desiccation process after heavy rainfall followed a different pattern (Fig. 13C). In this case, running water was present in the furrows for up to 1 h after rainfall stopped. The ‘red’ community was continuously flooded and the ‘green’ community could transport liquid water by capillary forces to extend its active period. The boundary of the ‘black’ community is defined by the distance water can be transported. As a consequence, the water supply of the ‘black’ community was limited by its own storage capacity and photosynthesis was inactivated earlier (Fig. 13C). Discussion We present here one of the first detailed studies of the photosynthetic capacity of different cyanobacterial communities in situ on the bare granite rock of an inselberg. We focus on the effects of the most important abiotic factors, namely light and water. In general, cyanobacteria exhibit low apparent effective quantum yield of PSII (DF/Fm’) under low light conditions, as revealed in detail under laboratory conditions by Campbell et al. (1998). Under both natural and laboratory conditions, maximum apparent effective quantum yield was achieved at low irradiances and DF/Fm’ never exceeded 0.60. This agrees with data presented by Lüttge et al. (1995). In addition, there was little apparent down-regulation of light reactions (i.e. only a small decrease in DF/Fm’) with increasing irradiance. Moreover, apparent effective quantum yield never decreased to low levels, so that electron transport rates (ETR) at high irradiances were remarkably high. Consequently, non-photochemical quenching mechanisms, which would further decrease DF/Fm’, were minimal. This supports the suggestion of Stransky & Hager (1970) that cyanobacteria lack the xanthophyll cycle, which constitutes the main component of dynamic adaptation to excessive light in higher plants (see Demmig-Adams & Adams, 1996). However, chronic photoinhibition was not observed during predawn measurements, although the cyanobacteria were exposed to extreme irradiance (Fig. 11). In contrast, cyanobacteria grown under artificial laboratory conditions sustained damage to the photosynthetic apparatus and did not recover for several days after sudden transfer to high light (Demmig-Adams et al., 1990b). Survival in the extremely high-light habitat of the inselbergs, therefore, requires other mechanisms to protect U. Rascher et al. against surplus irradiance. Effective sunblocking pigments, which are produced by all cyanobacteria in light-exposed environments, can provide the main basis for reducing intracellular light (Büdel, 1999; Büdel et al., 1997b) and help reduce ETR. Mechanisms of protection against damage by high irradiance can be observed in the formation of effective extracellular sun-blocking pigments, such as the indol-alkaloid scytonemin (Garcia-Pichel & Castenholz, 1991). In exposed epilithic cyanobacteria of Venezuela and French Guiana, scytonemin, with its absorption maximum at 380 nm, is found in such high concentrations that PAR up to 500 nm is reduced. Moreover, intracellular carotenoids such as zeaxanthin (Demmig-Adams et al., 1990a) and canthaxanthin (Albrecht et al., 2001; Lakatos et al., 2001) may prevent photodamage, as indicated by two other studies: (i) photoinhibition took place in cyanobacterial mutants that were unable to form canthaxanthin (Albrecht et al., 2001); (ii) increased canthaxanthin content was closely correlated with irradiance in cyanobacterial mats of different habitats in Venezuela (Lakatos et al., 2001). However, formation of these pigments is rather slow and takes place over days (EhlingSchulz et al., 1997; Lakatos et al., 2001). Thus, the effective irradiance inside the cells of free-living cyanobacteria is much lower than at their surface, which allows colonization of the bare rocks of inselbergs with their highly fluctuating light environment. Another feature was observed during the morning hours, which are ecologically important for carbon gain of the cyanobacteria. Water supply can be considered good in the early morning, because of frequent night-time rainfall and high relative humidity during the night. Irradiance and temperature are moderate and, therefore, optimal conditions for photosynthesis occur during this time of the day. We have demonstrated that the photosynthetic apparatus of cyanobacteria can be activated after a period of darkness either by weak light, which occurs naturally during dawn, or artificially by intermittent light pulses. Under natural conditions, this activation is completed gradually (Fig. 11B). When stimulated by light pulses, however, activation occurs within a few minutes (Fig. 11C, D), resulting in a strong increase in Fv/Fm (0.20 – 0.48; Fig. 11B). In purple nonsulphur bacteria and cyanobacteria, respiratory and photosynthetic electron flow share the same electron transport intermediates (Scherer, 1990). Respiratory electron flow in the dark generally shifts the electron transport chain towards a reduced state (for a review of this so-called state transition, see Campbell et al., 1998). In the dark or under very low light, therefore, cyanobacteria are in the so-called state II, which results in low variable fluorescence. As light is applied to the dark-adapted cyanobacteria, PSI 254 activity partially oxidizes the electron transport chain and the cells shift towards state I, with higher PSII efficiency (Campbell et al., 1998). This phenomenon is well known from laboratory studies and was recently shown for marine algal assemblages (Behrenfeld & Kolber, 1999). Here we show for the first time that this state transition also occurs in terrestrial cyanobacteria and is ecologically important. This transition between state II and state I, with its concomitant activation of photosynthesis, takes place every morning under natural wet conditions. Predawn measurements of chlorophyll fluorescence have to be interpreted with care. Measurements of dark-adapted organisms do not reveal maximum fluorescence and, therefore, the optimal quantum yield (Fv/Fm) and non-photochemical quenching (qN and NPQ) cannot be calculated in the standard way. Phycobilisomes also influence F0 values, and respiration operates even in high irradiances, keeping a relatively large proportion of QA oxidized. These mechanisms also influence fluorescence values. Thus, maximum fluorescence values, either for Fm or for Fm’, cannot be obtained without application of DCMU to block electron transport. The spatial distribution of cyanobacterial mats on the bare rocks of the inselberg is governed by different ecophysiological capacities and microhabitat niches. ‘Black’ communities dominated by Scytonema can be regarded as generalists, covering more than 80% of the open rock formations. High photosynthetic quantum efficiency over a wide range of irradiances (Fig. 10) and the ability to reduce atmospheric N2 enable these cyanobacteria to become the dominant species in this habitat. The fast activation kinetics during dawn and after watering facilitate their widespread colonization of the rocks. Cyanobacteria are resistant to desiccation and can survive in the dry state for long periods. This resistance to dehydration may be due to three factors – water storage, water holding capacity and water distribution – and is a prerequisite for occupying the bare granite outcrops of inselbergs. Nevertheless, growth of the cyanobacteria is limited by the availability of liquid water, but photosynthetic electron transport of the ‘black’ community is reduced fastest after natural rain events (Fig. 13C). The other communities (‘red’ and ‘green’) cover microhabitats along the furrows and make use of the different water regimes. Although the ‘green’ and ‘black’ communities differ only in the relative abundance of different species, their photosynthesis clearly shows different kinetics during desiccation (Fig. 13). The separation between the ‘green’ and ‘black’ community is determined by the distance water can be transported from water-filled furrows by capillary forces of the Stigonema species. With Photosynthesis of cyanobacteria their long branched filaments, they become dominant in the ‘green’ community (Table 1). The filaments have a large surface area, and transport water by capillary forces, as well as having a high water storage capacity within the thick mats (Fig. 13B). While photosynthetic capacity of the ‘green’ community is similar to that of the ‘black’ community, water transport and water storage capacity differ (Fig. 13B). The extended time period of optimal water status favours higher productivity of Stigonema species. Gloeocapsa sanguinea, which dominates the ‘red’ community, can be found in low abundance all over the inselberg. In the centre of the furrows, however, Gloeocapsa sanguinea is the dominant species. Although the ‘red’ community has lowest values of apparent effective quantum yield, it is not overgrown in the furrow-centre. The limit of growth in the ‘green’ community is sharply defined by the level of potential water flow. Rapidly flowing water mechanically strains the long filaments of Stigonema ocellatum and favours the survival of compact growth forms, such as Gleocapsa sanguinea, which dominate the furrow centre. Their comparatively low photosynthetic capacities, however, may be offset by long periods of water flow after rain. The photosynthetic responses of free-living cyanobacteria to extreme and fluctuating irradiance and water availability have been described in this study. 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