Acoustic Monitoring of a Previously Unstudied Whale Shark Aggregation in the Red Sea Thesis by Jesse Cochran In Partial Fulfillment of the Requirements For the Degree of Master of Science King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia Awaiting Approval 2 The thesis of Jesse Cochran is approved by the examination committee. Committee Chairperson: Michael Berumen Committee Member: Stein Kaartvedt Committee Member: Greg Skomal 3 ABSTRACT Acoustic Monitoring of a Previously Unstudied Whale Shark Aggregation in the Red Sea Jesse Cochran The whale shark (Rhincodon, typus), is a large, pelagic, filter feeder for which the available information is limited. The Red Sea populations in particular are practically unstudied. An aggregation site was recently discovered off the western coast of Saudi Arabia. We report the use of passive acoustic monitoring to assess the spatial and temporal behavior patterns of whale sharks in this new site. The aggregation occurs in the spring and peaks in April/ May. Whale sharks showed a preference for a single near shore reef and even a specific area within it. There is no evidence of sexual segregation as the genders were present in roughly equal proportion and used the same habitat at similar times. This information can be used to guide future studies in the area and to inform local management. Continued study will add to the collective knowledge on Red Sea whale sharks, including the population dynamics within the region and how they interact with the global whale shark community. 4 TABLE OF CONTENTS Committee Approval Page…….…………………………………….2 Abstract..………………………………………………………………..3 Table of Contents……………………………………………………..4 Chapter 1 Literature Review……………………………………………………..5 Introduction…………………………………………………………..25 Methods and Materials……………………………………………...27 Results…………………………………………………………………32 Discussion…………………………………………………………….42 Work Cited……………………………………………………………..47 5 Chapter 1 Review of the Biology of the Whale Shark The whale shark, Rhincodon typus, is a large pelagic filter feeder. This species is poorly understood, with only limited data on many aspects of its biology. Hard data, when it exists, is often preliminary as many studies are restricted to small sample sizes and specific regions. The available information, limited though it may be, provides a valuable foundation for this and other whale shark studies. The known biology of the whale shark—including its systematics, biogeography, feeding ecology, and life history—is reviewed below. Aggregation sites are examined separately because of their value to research, potentially integral role in whale shark ecology, and their fundamental importance to this thesis. Systematics Taxonomy Rhincodon typus is derived from a misspelling of the Greek rhine (file), the Greek odont (tooth), and the Latin typus (type). The generic name is believed to be the result of a printer error in which the “e” in “Rhineodon” was mistaken for a “c” (Castro, 2011). Known synonyms include: Rhineodon typus, Rhiniodon typus, Rhinodon typicus, Rhinodon pentalineatus, and Micristodus punctatus. The official name was the subject of some debate until 1984 when the International Commission on Zoological Nomenclature placed Rhincodon on the Official List of Generic Names in Zoology (Castro, 2011). 6 Phylogeny R. typus is a modern shark, meaning that it belongs to the class Chondrichthyes, the subclass Elasmobranchii, the super order Selachamorpha, and the subcohort Neoselachii. It is the only pelagic member of the Orectolobiformes (carpet sharks), an order otherwise characterized by benthic foragers and ambush predators (Compagno, 1999). Within this order, it is most closely related to the nurse sharks (Ginglymostomatidae) and the zebra sharks (Stegastomatidae) (Musick et al, 2004). It is the only member of its family, Rhincodontidae, which is believed to have diverged sometime during the Paleocene period, 65.5-56 million years ago (Musick et al, 2004). Description/Identification Figure 1: A free swimming whale shark accompanied by pilot fish and remoras. Photo credited to Pedro de la Torre. Most authors describe the whale shark as “unmistakable” (Castro, 2011) (Campagno, 2005). Its size, shape, and coloration easily distinguish it from all other taxa. It is a huge species, with individuals commonly attaining sizes of ten 7 meters and the largest specimens growing in excess of twelve (Castro, 2011). It has a broad, flattened head with a terminal mouth containing 300 rows of vestigial teeth. The body is fusiform and possesses prominent lateral ridges which run along its dorsal surface. Dorsal coloration is a grey-green or greybrown overlaid by an intricate pattern of white spots and bars, giving the shark its unique “checkerboard” appearance. This patterning fades to a solid white on the shark's ventral surface. Biogeography Range and Distribution Figure 2: Global whale shark distribution (Norman, 2005). The whale shark’s pelagic lifestyle has allowed it to range further than its demersal kin. It is cosmopolitan in all tropical and warm temperate seas except for the Mediterranean (see Figure 2). Though the whale shark is capable of inhabiting any area within its range, it is not evenly distributed throughout. Most 8 regions report whale shark sightings only at certain times of the year (Rowat, 2007).Even then, occurrences are unpredictable, making encounters with whale sharks haphazard (Castro, 2011). The dozen or so known aggregation sites, areas in which large numbers of whale sharks gather on a predictable seasonal basis, are an exception to this (see Figure X). These events can range in size from a half dozen to over a hundred individuals and are usually associated with local increases in zooplankton abundance. Aggregations are examined in greater detail later in this review. Population Structure With such a wide spread distribution, it might be expected for different populations of whale sharks to become geographically isolated and diverge into corresponding genetic lineages. Such patterns have occurred in other circumtropical fish, in at least one case producing a ring species (Bowen et al, 2001). So far the genetic work conducted on the whale shark has produced mixed results. A study examining mitochondrial DNA has found significant differences between whale sharks sampled in the Atlantic and the Indian/Pacific (Castro et al, 2007). Research using microsatellites, however, has found no such differences (Schmidt et al, 2009). Mitochondrial DNA is inherited on a matrilineal basis; microsatellites, on the other hand, are part of the nuclear DNA inherited from both parents. The uniformity of microsatellites coupled with the differences in mitochondrial DNA suggests that while female whale sharks may be geographically isolated, there is still significant male-mediated gene flow between 9 ocean basins(Schmidt et al, 2009). Like much of the available data on the whale shark, the information above is preliminary. Both the microsatellite and mitochondrial studies point out that the sample sizes used for their analysis were small (n < 100). Still, whale sharks would not be the first shark species to exhibit this pattern. Research on the great white (Carcharodon, carcarias) populations of South Africa and Australia has yielded similar results (Pardini et al, 2000). Movement The evidence of gene flow between geographically disparate populations suggests that whale sharks are capable of traveling significant distances. This has been corroborated by several tagging studies. Satellite tags attached to whale sharks routinely report movements thousands of kilometers in length, the longest being nearly 13000 km (Eckert and Stewart, 2001). This shark was tagged inside the Gulf of California, tracked west past the Hawaiian Islands and into the central Pacific (Eckert and Stewart, 2001). Even relatively small sharks are capable of long distance migrations. For instance, a 3m whale shark tagged north of Mindanao in the Philippines, traveled over 4500 km in 70 days. It crossed the entire Sulu Sea and last reported 280 km south of Vietnam (Eckert et al 2002). Six sharks tagged on Ningaloo reef in Australia recorded journeys ranging from 1200-6600 km, often moving against the prevailing currents (Sleeman et al, 2010). The capability of whale sharks to undertake large-scale horizontal movements makes connectivity of the global population possible, yet vertical movement 10 through the water column may be just as important. Several studies have used pressure sensor equipped tags to monitor dive behavior. In shallow coastal areas, whale sharks use the entire water column, regularly diving close to the bottom and then rising back near the surface (Gunn et al, 1999). Whale sharks in open water regularly make dives ranging to 500m, punctuated with the occasional dive in excess of a kilometer (Brunnschweiler, 2009). Most authors attribute movement through the water column to foraging behavior (Brunnschweiler, 2009). The sharks are generally shallow at night and deeper during the day, and this correlates with the diel vertical migrations of many zooplankton species (Graham et al, 2006). In Belize, whale shark diving behavior has been correlated to the lunar-driven spawning cycles of snapper (Graham et al, 2006). During the new moon, when the snapper are not spawning, the sharks dive deeper and stay at depth longer. Another possible explanation for vertical movement behavior in whale sharks is the use of diving to optimize cost of transport (Gleiss et al, 2011). Whale sharks may effectively “glide” horizontally as they dive, reducing energy consumption. The long range horizontal movements so important for the shark’s dispersal might not even be possible without the vertical component. Feeding Ecology Anatomy and Mechanism of Filtration Filter feeding evolved independently in all three shark species known to utilize it, and each species possesses a unique feeding mechanism (Taylor et al, 1983). 11 The filtration anatomy of the whale shark consists of an upper and lower filtration pad associated with each of the sharks ten gill slits. The interior surface of these pads is composed of a fine (average opening size = 1.2 mm) irregular mesh. The exterior surface is lined with primary and secondary cartilaginous channels (Motta et al, 2010). During feeding, water enters the mouth and flows through the pads where it is filtered by the irregular mesh. The water is then directed by the exterior channels through the shark’s gill filaments before exiting out the gill openings (Motta et al, 2010). Three hypotheses have been proposed for the method by which the whale shark separates plankton from the water: dead-end sieving, hydrosol filtration, and cross-flow filtration (Motta et al, 2010). In dead-end sieving water flows perpendicular to the filter pads, and only particles larger than the mesh size are captured. This seems unlikely because whale sharks have been observed feeding on prey far smaller than 1.2 mm (Motta et al, 2010). Hydrosol filtration implies that the mesh of live sharks is coated in mucus or some other adhesive material. While this setup would allow the shark to capture smaller particles, it would also clog quickly and require the shark to clear its filters more often than has been observed (Motta et al, 2010). In cross-flow filtration, water and plankton flow parallel to the filters at high velocities. Water is drained through the gills and plankton is concentrated at the back of the pharyngeal cavity and then swallowed (Motta et al, 2010). Cross-flow filtration has been observed in bony fish, and preliminary analysis suggests that the hydrodynamics of filter feeding in whale sharks are similar (Motta et al, 2010). While there is no direct evidence for cross- 12 flow filtration in whale sharks, it lacks the shortcomings of both dead-end sieving and hydrosol filtration. Prey Selection The whale shark is known to feed on a variety of planktonic prey. It has been observed feeding on fish spawn (Heyman et al, 2001), copepods (Clark and Nelson, 1997), and crustacean larvae (Springer, 1957). The one in depth analysis of whale shark stomach contents comes from a single specimen captured off of India (Silas and Rajagopalan, 1963). A subsample of its stomach contents contained 87% zooplankton; 12% Sand, shell bits, and plant material (all possibly ingested during capture); and 1% nektonic fish, mollusks, and crustaceans. The zooplankton component was further subdivided into 70.4% crustaceans, 0.3 % mollusks, and 29.3% chaetagnaths (Silas and Rajagopalan, 1963). While several authors have reported whale sharks deliberately feeding on schools of small fishes and even tuna (Springer, 1957), others have suggested that these are mistaken accounts in which the sharks and the fish schools are both filter feeding in close proximity (Nelson and Eckert, 2007). Foraging Behavior The feeding apparatus of the whale shark is not capable of the same through-put as that of the basking shark but it is thought to be more versatile (Taylor et al, 1983). While all three filter-feeding sharks are capable of ram feeding (using forward motion to force water over their gills), only the whale shark is known to employ suction feeding (gulping water independent of forward motion) (Taylor et 13 al, 1983). The ability to use both has given rise to three distinct foraging behaviors: passive feeding, vertical feeding, and active feeding. Passive feeding is a ram-type technique in which the shark swims slowly beneath the surface with its mouth open (Taylor, 2007). During vertical feeding, the shark remains stationary, with its head near the surface. This is a suction type behavior as the shark gulps and expels water without the use of forward motion (Nelson and Eckert, 2007). While active feeding, the shark swims with its mouth partially breaking the surface, frequently turning its head and making sudden changes in direction (Clarke and Nelson, 1997). The shark simultaneously uses forward motion and suction to force water over its gills. During all of these behaviors the shark must close its mouth in order to swallow accumulated plankton, and also “cough” infrequently to clear its filter pads (Nelson and Eckert, 2007). While several studies have described the foraging behavior of whale sharks, only one (Nelson and Eckert, 2007) has investigated the relationship between the available prey and the mode of predation. This study found that the feeding strategy was determined by prey abundance and, to a lesser extent, prey composition. Passive feeding was observed in the lowest plankton concentrations and might be the “default” behavior adopted by the shark as it searches for higher prey densities. A few zooplankton taxa were present in greater proportion during passive feeding when compared to the other feeding modes, but overall abundance was considered too low for this to be driving the shark’s behavior (Nelson and Eckert, 2007). Vertical feeding occurred in medium densities of mixed zooplankton assemblages (48% copepod, 10% shrimp, 15% 14 amphipod, and 11% other) (Nelson and Eckert, 2007). This stationary method may be more energy conservative than active feeding while still being effective at filtering moderate concentrations of plankton. Active feeding was observed in zooplankton concentrations four times higher than those in which sharks were feeding vertically. In addition, plankton composition was dominated by copepods (96.6%) (Nelson and Eckert, 2007). The vigorous swimming associated with active feeding is energetically costly which may limit its use to areas of high plankton density. The shark’s ability to locate increased concentrations of plankton remains a mystery. One proposed method is the use of olfaction to home in on dimethyl sulfide, a chemical released by phytoplankton when grazed by zooplankton (Martin, 2007). Other animals are known to use dimethyl sulfide as a feeding cue (Nevitt et al, 1995) and the whale shark’s widely spaced, terminal nostrils and well developed olfactory capsules suggest that it is adapted to foraging by smell (Martin, 2007). It has also been suggested that whale sharks use hearing to detect the presence of schooling planktivorous fish (Nelson and Eckert, 2007). The whale shark possesses the largest inner ear in the animal kingdom (Martin, 2007) and has been observed feeding in association with such schools (Nelson and Eckert, 2007). Until additional data becomes available, both hypotheses are little more than speculation. Life History Early Development 15 The available data on early development of the whale shark consists of 15 reported encounters with neonates (Aca and Schmidt, 2011), a single aborted egg case containing a live embryo (Baughman, 1955), and the dissection of a single pregnant female containing 300 pups (Joung et al, 1996). In the latter case, two late term embryos were birthed alive and kept in captivity (Joung et al, 1996). Whale sharks are born at 46 to 64 cm total length. This is based on the largest embryos found in the pregnant female (58-64 cm) (Joung et al, 1996) and the smallest free swimming whale shark yet recorded (46 cm) (Aca and Schmidt, 2011). They are apparently born with significant stores of energy as one of the surviving embryos swam continuously without eating for the first seventeen days following birth (Chang et al, 1997). This is further supported by a dissected whale shark embryo which was found to contain ample stores of absorbed yolk (Garrick, 1964). The few neonate whale sharks successfully kept in captivity have demonstrated a remarkable growth rate. A 60 cm individual weighing one kg grew to 139 cm and 20.4 kg in 120 days (Chang et al, 1997). Another specimen, kept for 3.2 years, grew from 70 to 369 cm and from 0.8 to 151.25 kg (Yang and Horike, 1998 (Cited in Castro, 2011)). If wild growth rates are anywhere near those observed in captive specimens, then it would make the whale shark one of the fastest growing of all shark species. The rapid somatic growth rate and large litter size suggest that neonate whale sharks are subject to high mortality in the wild (Martin, 2007). The fact that two neonates have been discovered as part of the stomach contents of pelagic predators corroborates this (Kukuyev, 1995) (Coleman, 1997). Poor swimming 16 ability in young whale sharks may contribute to their vulnerability (Martin, 2007). Neonatal and juvenile whale sharks (46-93 cm) have proportionally smaller fins and a more strongly heterocercal caudal fin with a lower angle of thrust than their adolescent and adult counterparts (4-10m) (Martin, 2007). These traits are similar to those of neonatal tiger sharks (Galeocerdo cuvier) which utilize an inefficient anguilliform swimming stroke (Branstetter et al, 1987). The morphological similarity makes it likely that neonate whale sharks employ a similar and equally ineffective mode of transportation (Martin, 2007). Lacking an effective means to flee from predators suggests that young whale sharks employ other strategies to avoid predation. One hypothesis is that the shark’s countershading, along with the disruptive properties of its patterning, serve as camouflage in the pelagic environment (Wilson and Martin, 2003). The countershading allows the shark to blend with the water when viewed from above or below, and the pattern of bright spots and bars serve both to obscure the sharks outline and to mimic the mottled effect of sunlight passing through surface waves (Wilson and Martin, 2003). These are not unique adaptations. All known Orectolobiform sharks possess disruptive color patterns at birth, and most epipelagic sharks display some form of countershading. It is interesting to note that neonate tiger sharks, which share the weak swimming capabilities of neonate whale sharks, also possess both countershading and disruptive coloration. Unlike other Orectolobiform sharks, and also unlike the tiger shark, the whale shark’s coloration remains unchanged throughout its life (Wilson and Martin, 2003). The reasons for this are unclear though crypsis may remain 17 important to the whale shark as even adults can fall prey to orca whales and possibly great whites (O’Sullivan, 2000) (Fitzpatrick et al 2006). There is a distinct lack of information on whale sharks ranging from one to three meters. The available data consists of a single 1.4m specimen from the Philippines, the two birthed embryos which grew to this size range in captivity, a school of fourteen whale sharks estimated at 1m from India, and an unconfirmed report of a stranded 2m specimen from Western Australia. Whether animals in this size range remain at depth, at least diurnally, or occupy some other inaccessible habitat is unknown (Martin, 2007). A deep-at-day shallow-at-night lifestyle would make sense as it would allow the shark to follow vertically migrating zooplankton and use darkness to avoid visual predators. Given the rapid growth rate, whale sharks may occupy this size range for only a limited period of time. Regardless of the reason for these individuals’ scarcity, more data is needed on whale sharks at this stage of development in order to understand the ontogenetic shifts that occur between the shark’s juvenile and adolescent forms. Age and Growth Over the course of its life, a whale shark will grow from a 46-64 cm neonate to over 12 m in adulthood (Aca and Schmidt, 2011) (Castro, 2011). How quickly growth occurs and how growth rate changes with age is poorly understood and has received only limited research attention. There have been few studies of whale shark growth rates using captive specimens, including those on neonatal 18 growth mentioned earlier in this review. At the Osaka Aquarium, a female whale shark grew 369 cm in eight years (46.125 cm/year) and a male grew 106 cm in three (35.3 cm/year) (Kitafuji and Yamamoto, 1998). In another study, growth rates were measured for three specimens, a female and two males. The female grew 166 cm in 5.6 years (29.5 cm/year), one male grew 61 cm in 2.8 years (21.6 cm/year), and the other grew 32 cm in 1.2 years (25.5 cm/year) (Uchida et al, 2000). Unlike the research conducted on neonate growth, the sharks from these studies were of unknown age. It is therefore difficult to incorporate this growth data into an understanding of whale shark life history. The most common method for age determination in sharks is counting the translucent/opaque band pairs (also known as growth rings) in the animal’s vertebrae. There is only one published work which has attempted to correlate growth with vertebral ring counts in whale sharks (Wintner, 2000). This study compared the size data and vertebra of 17 specimens (14 from beachstrandings, 3 in captivity). The analysis yielded a linear relationship between growth ring count and length (Wintner, 2000). Analysis of a single captive juvenile whale shark suggests that one growth ring is deposited every year in this species (Calliet et al, 1986). If this applies to wild sharks and holds through adulthood, then the linear relationship between length and growth ring count could be translated to a linear rate of growth. Like many aspects of whale sharks life history, more data is required for these findings to be confirmed. Validated age studies on larger, wild sharks are required to verify the deposition of a single ring per year and to determine the growth rate at latter stages of whale shark 19 development. Unfortunately, the collection and analysis of vertebrae requires lethal sampling, which limits available specimens to those that have died in aquaria, been brought in by fisheries, or stranded on beaches. Of the seventeen sharks examined in Wintner’s age and growth study, three males with total lengths of 9-9.5m were judged to be mature (Wintner 2000). Another study of stranded whale sharks found two mature males with total lengths of 9 and 9.3 m, and also two immature males with lengths of 9.1 and 9.2 m (Beckley et al, 1997). Based on these findings maturity in male whale sharks occurs at lengths between 9 and 9.5 meters. There is insufficient data to assess size of maturity in females. In most sharks females reach maturity at larger sizes than males, and the one recorded pregnant female was 10.6 m. In the absence of further information, size at maturity for female whale sharks can be estimated as occurring between 9.5 and 10 meters (Castro, 2011). Reproduction Whale sharks have never been observed in copulation. There is one record of suspected courtship between two sharks from Ningaloo Reef. The interaction consisted of “circling one another at variable distances, broken sporadically by periods of close follow and parallel swim-by behaviours” (Martin, 2007). The classification of this as courtship is tenuous, as neither coitus nor even the genders of the specimens involved were confirmed (Martin, 2007). Mating behavior has been observed in the closely related nurse shark (Ginglymostoma cirratum) (Carrier et al, 1994). In this species, the male bites one of the female’s 20 pectoral fins and positions her before inserting a clasper into her cloaca. The male’s ability to maintain a hold on the female until copulation has been completed serves as a test of his fitness (Pratt and Carrier, 2001). Similar behaviors may or may not occur in the whale shark, and only confirmed observations of its courtship and mating will yield anything more than speculation. There is no data on the length of gestation in whale sharks, though the discovery and dissection of a pregnant female in Taiwan confirmed that the species is a lecithotrophic livebearer capable of supporting litters of at least 300 pups (Joung et al, 1996). In this case the pups were at different stages of development with some ready to be born and others not yet hatched from their egg cases. This, along with paternity analysis suggesting that all of the pups shared the same father, indicates that female whale sharks are capable of storing sperm and fertilizing their eggs continuously (Schmidt et al, 2010). Parturition in whale sharks may occur as a single massive birthing event in which the entire litter is discharged, or it may happen over a period of weeks in which fetuses are birthed as they develop. Pupping grounds for the whale shark are unknown and may not exist. As neonate whale sharks are thought to be poor swimmers (Martin, 2007), it stands to reason that the few known neonatal specimens were discovered near their place of birth. The locations of these encounters seem more indicative of the circumtropical distribution of the species than of any specific birthing ground. If pupping grounds do not exist, then multiple 21 birthing events would be advantageous (Schmidt et al, 2010). Separate births occurring at different times could also occur at different places, reducing the likelihood of the entire litter being deposited in a dangerous or unsuitable habitat (Schmidt et al, 2010). There are two records of juvenile whale sharks echelon swimming with a larger conspecific (Taylor, 1994) (Pillai 2001). This is unlikely to be an example of parental care, both because such behaviors are unknown in sharks and because the larger individual in one of these records was judged to be 5.5 m in length, far below the suspected size of maturity (Castro, 2011). It does suggest schooling behavior in juvenile and possibly neonatal whale sharks. This would allow them to cooperatively spot and avoid predators, and also spread the chance of predation throughout the school, reducing each shark’s individual risk. Schooling behavior might favor a single birth event as the neonatal sharks would be born into an environment rich in suitable conspecifics (their siblings). This would also fit with recent research suggesting that the closely related nurse shark retains developed embryos until the entire litter is ready for birth (Wilson and Martin, 2003). Aggregations Known Aggregation Sites Aggregation sites are areas in which whale sharks gather on a predictable basis. They are given special attention here because of their continued utility to ongoing research, and because a previously unknown aggregation is the subject of this 22 thesis. Prior to this writing, approximately a dozen aggregation sites have been documented. Each of these has received varying degrees of study and much of the work cited above would not have been possible without the relatively large sample sizes available in these locations. Figure 3: Global whale shark distribution (dark grey) with known aggregations: 1=Gulf of Baja, 2=Galapagos, 3=Holbox, Mexico, 4=Belize, 5=Mozambique, 6=Maldives, 7=Gujarat, India, 8=Philippines, 9=Ningaloo, western Australia, D=Djibouti, S=Seychelles (Rowat et al 2011). The distribution of the various aggregation sites is shown in Figure 3. Though there are some differences in the seasonality, size, and composition of these aggregations, there are also traits which most or all of them share. Most aggregations have been shown to occur in conjunction with local increases in zooplankton abundance. In Ningaloo Reef, the arrival of whale sharks corresponds to coral spawning (Taylor, 1996). In Belize, the aggregation has been associated with fish spawning events (Heyman et al, 2001). In the Gulf of Baja, aggregating whale sharks have been shown to feed on copepod blooms (Clark and Nelson, 1997). Rich zooplankton biomass has been associated with 23 the seasonal abundance of whale sharks in Djibouti (Rowat et al, 2011), and the Seychelles aggregation appears to coincide with summer plankton blooms (Gifford, 2002). Many aggregation sites also show evidence of sexual segregation, with most having gender ratios skewed to male. Out of 360 whale shark observations made over 3 years at Ningaloo reef, 85% were of males (Norman and Stevens, 2007). In Belize, out of 162 shark encounters 154 (94%) were males (Graham and Roberts, 2007). In the Seychelles 82 % of identified sharks were male, 85% in Djibouti (Rowat et al, 2011). The Maldives reported 95% males out of the 63 identified specimens (Riley et al, 2010), and in Mozambique 81% of 300 individuals were male (Pierce et al, 2008). Holbox, Mexico was more weakly skewed to male with an average 72% over 6 years (de la Parra, unpublished data). Gujarat, the Gulf of Baja, and the Philippines were the exceptions; all having gender ratios close to one to one (Silas, 1986) (Ramirez-Macias et al, 2006) (Quiros, 2008). In the case of Gujarat this may be an artifact of small sample size (27) (Silas, 1986). Until more gender data is obtained from this region, it is impossible to say anything conclusive. This leaves the Gulf of Baja and the Philippines, and the high occurrence of females at these sites is still unexplained, as is the segregation that occurs in other areas. Another common characteristic is the predominance of immature whale sharks within these sites. This has been shown for all aggregations in which it has been assessed. Again the Gulf of Baja is interesting, not only because it reports 24 mature individuals, but also because these larger sharks segregate themselves from their smaller counterparts (Eckert and Stewart, 2001). Immature sharks have been shown to occupy the northern, inner portions of the gulf, while mature specimens are found in the southern reaches near the open ocean (Eckert and Stewart, 2001). It is also noteworthy that the mature individuals are almost exclusively female, while the immature sharks tend toward male (RamirezMacias et al, 2007). The purpose of this population structure is unknown, and The Gulf of Baja certainly warrants further study. Taken in combination, the male dominated gender ratios and low abundance of mature individuals means that none of the currently known aggregations represents a functional population. Too few mature individuals are using these sites for them to be considered breeding aggregations, meaning that feeding may be the sole motivation for these gatherings. A large subset of the breeding population must either be staying at depth, offshore, or both. If this is the case, then we may never gain a complete understanding of whale shark ecology from only studying aggregation sites. Still, the information available at these sites has hardly been exhausted and the known aggregations require additional research. Case in point, the Philippines, Gujarat, and the Galapagos aggregations are largely unstudied. Work in the Philippines has focused on the effects of the regions lucrative ecotourism industry (Quiros 2005) (Quiros 2007), the several targeted whale shark fisheries scattered around the islands (Alava et al, 1997), and more recently on a few confirmed neonate whale sharks (Aca and Schmidt, 25 2011). The Gujarat aggregation is known almost entirely from fisheries records (Silas, 1986). Research on Galapagos whale sharks has begun only recently and remains unfinished. In addition to these known but understudied sites, there may also be aggregations which are still unknown to science, as evidenced by the present study. Conclusion As the feeding apparatus of the whale shark is dependent on high prey availability, aggregation sites may serve as essential temporary habitats for this species. Many aggregations are primarily composed of immature specimens, and the abundance of food in these areas may help fuel their rapid and apparently linear growth. Furthermore, as demonstrated by numerous studies, the predictable concentration of normally diffuse whale shark populations at these sites is invaluable for ongoing science. Therefore, an understanding of the spatial and temporal characteristics of these aggregations is vital to guiding future research and management efforts for this species. Introduction One potential way to assess both the temporal and spatial characteristics of a whale shark aggregation is passive acoustic monitoring. This technique involves the placement of acoustic receivers in strategic locations throughout the area of interest. Target animals are tagged with acoustic transmitters which “ping” an individually coded, ultrasonic signal at regular intervals. The receivers are capable of detecting and recording these pings at ranges of about 500 meters. In 26 this way fine scale presence/absence data can be accumulated over long periods of time. This technique has been used on sharks in the past, including studies of juvenile blacktips (Carcharhinus limbatus) (Heupel and Heuter, 2001, 2002), scalloped hammerheads (Sphyrna leweni) (Klimley et al. 1988), and great whites (Carcharodon carcarias) (Klimley, 2001). Klimley’s work on hammerheads and great whites is particularly relevant here as both species were capable of moving beyond the range of his arrays. The hammerheads, for instance, were monitored by Klimley’s array as they swam around a Sea Mount in the Gulf of Baja. They left the sea mount, and the detection radius of the receivers, at dusk and returned at dawn. While the migration cycles of hammerheads show a daily pattern as opposed to the seasonal movements of whale sharks, the principle of monitoring known gathering sites remains the same. In the case of the great whites, Klimley used receivers modified for extremely high spatial resolution. These receivers could only cover a small area, but they could triangulate the position of a tag to within one meter. This is important because, like the whale shark, the great white is capable of large scale transoceanic migrations. This study demonstrated that monitoring sites of heavy use can be effective, even if the target area is only a tiny fraction of the animals’ total range. In 2009 a previously unknown aggregation site was discovered in the southern Saudi Arabian Red Sea. While data is limited on whale sharks in general, the Red Sea populations are practically unstudied. Only a single published article 27 exists on Red Sea whale sharks and this is a dubious account of the fatal ramming of four sharks by shipping vessels. By using passive acoustic monitoring to evaluate this new aggregation, we can verify the technique in this context while simultaneously collecting valuable data on an understudied portion of the whale shark population. Methods and Materials Receiver Setup and Deployment Mooring Construction A total of 32 vemco VR2W acoustic receivers were deployed in the region. They were secured to the bottom using either cinder block moorings or tire moorings. Cinder block moorings were constructed by shackling two cinderblocks together with steel chain. A half meter length of standard garden hosing was looped through the chain and rope was threaded through the hosing and spliced into itself. Subsurface floats were attached to rope at three meters depth. Tire moorings were constructed by filling the “doughnut hole” of the tire with cement. A three meter long PVC pipe was fixed into the cement before drying. The free end of the PVC had a hole drilled into it through which hosing could be looped and rope threaded. In both cases the receiver was secured to the line using cable ties. Cinderblock moorings were used on reef topography and at shallow depths. They are lighter and less stable than tire moorings, so where possible a diver would 28 wedge them into reef crevices in order to secure them. Tire moorings were used on soft substrate and in deeper waters. They are effectively immovable once submerged which prevented repositioning after deployment. Each receiver site was assessed specifically to determine which method was most advantageous for that location. Receiver Array Figure 4: WS Reef with the receiver sites marked. Twelve receivers were placed around the perimeter of a single reef known locally as “Shib Habil” (“Rope Reef”). This reef has been associated with the majority of recorded whale shark sightings in the Al Lith area, so “Whale Shark Reef” has also become common. For the purposes of this paper we refer to it as “WS 29 Reef.” It is approximately 2.5 kilometers from shore and 3.5 kilometers from Al Lith. The reef itself is “Г” shaped, with the horizontal line running 3km east to west and the vertical line running 5km northwest to south east. Two years of observation and photo identification have recorded 107 unique individuals on this site, with a near equal ratio of males and females (Berumen, unpublished data). Figure 5: Total Array The remaining twenty receivers are scattered throughout other regions of interest in the area. Two are north of WS reef, and two are shoreward of it. Seven are in a southern, inshore area riddled with various mangrove mouths and patch reefs. Two are on a northern inshore reef and three are located on offshore patch reefs. 30 The final three are located around Abu Latt, the largest island in the area. Only four whale sharks sighting have been recorded away from WS reef. Three were in open water and one was sighted near Abu Latt. One of the goals of this project is to determine if these reflect transient behavior or if the sharks are making frequent undetected use of areas outside WS reef. Transmitter Setup and Deployment Tag Rigging Figure 6: A: Tagging dart, B: Heat shrink wrap, C: Crimps, D: 1.5mm wire, E: Vemco V16P acoustic transmitter, F: Fully rigged tag. We used externally cased Vemco V16P individually coded acoustic transmitters which were programed to ping every two minutes plus or minus thirty seconds. The tagging attachment was rigged by looping stainless steel wire through a tagging dart and crimping the loop closed. The free end of the wire was looped 31 through the V16’s external casing opposite the transmitter then crimped. Both crimps and the wire were covered in heat shrink wrap to prevent rust and to keep the metal from abrading the shark’s skin. Deployment Figure 7: A: Tag attached to spear gun, B: Shark being tagged, C: Correctly tagged shark. Sharks were approached by 2-4 snorkelers. Pictures of both sides were taken for photo identification. When possible, sex was determined by swimming under the shark and observing the presence/absence of claspers. Tagging was done with a Hawaiian sling style spear gun and transmitters were placed immediately ventral to the first dorsal fin. Total length was estimated and used along with clasper morphology to determine maturity. All tagging was done in March, April, or May 32 of 2010 and 2011. Acoustic tags were successfully attached to 37 sharks in 2010 and 28 sharks in 2011. Results Overview Seasonality: The array has logged 13685 detections from 34 of 37 sharks tagged in 2010, and 6110 detections from 23 of 28 sharks tagged in 2011. The data collected so far confirms spring seasonality for the aggregation with 90% of all detections occurring from March through June. From July through December the array registering only a few, short lived periods of whale shark presence. Activity increased by approximately one order of magnitude during January and February, and by another order of magnitude during the season peak in April and/or May (see Figure 8). 10000 Figure 8: 2010-2011 Monthly Detections 8000 6000 4000 Total Detections 2010 Cohort 2000 0 Habitat Use: Comparing the number of detections logged by each receiver has shown that whale sharks strongly prefer WS Reef to the other areas in which receivers are present. Over 91% of the 19,795 whale shark detections have been 33 logged by receivers stationed around WS Reef, which account for only 37.5% of total receiver effort. Even within WS reef, detections are not evenly distributed. Detections across the reef seem to increase with proximity to the reef’s northwest corner. The three closest receivers have logged a total of 9257 received transmissions, which amounts to 51% of WS Reef detections and 45% of detections in general. Conversely, the three most isolated from the northwest corner have only recorded 585 detections, which is 3% of those from WS Reef and 1% of detections in general (Figure 9). Vertical Distribution favored shallow waters with 95% of detections occurring in the 10 shallowest depth bins (Figure 10). Figure 9: WS Reef Detections 4000 North Reef Edge 3000 West Reef Edge 2000 East Reef Edge 1000 8000 WS Line 24 WS Line 25 WS Line 18 WS Line 17 WS Line 5 WS Line 6 WS Line 7 WS Line 8 WS Line 4 WS Line 2 WS Line 1 WS Line 3 0 Figure 10: Depth Distribution 6000 4000 2000 0 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 Depth Bins 34 Sexual Segregation: There is no evidence of either temporal of spatial segregation of the sexes on a broad scale. There are no significant differences in the seasonality for male and female sharks, as both aggregate in the spring and disperse throughout the rest of the year (Figure 11). In addition, they are utilizing the same habitat over similar time scales. Both show a strong overall preference for the northwest corner of WS Reef (Figure 12), and spend most of their time in shallow waters (Figure 13). Figure 11: Monthly Detections By Gender 5000 Males Females 4000 3000 2000 1000 0 Figure 12: WS Reef Detections by Gender 1500 Female 1000 Male 500 WS Line 25 WS Line 24 WS Line 18 WS Line 17 WS Line 5 WS Line 6 WS Line 7 WS Line 8 WS Line 4 WS Line 2 WS Line 1 WS Line 3 0 35 Figure 13: Depth by Gender 4000 3000 Females 2000 Males 1000 0 4 5 6 7 8 9 10 11 12 13 Depth Bins 14 15 16 17 18 19 Seasonal Differences 2010 Season Structure: Acoustic activity over the 2010 season was erratic, generating multiple peaks and valleys (Figure 14). Some of this volatility may be due to the convoluted levels of transmitter/receiver effort used during the 2010 season. Transmitter effort increased incrementally over the season as additional sharks were encountered and tagged. More importantly, the receiver array was also being set up, dramatically increasing effort with each receiver added. Under these conditions, it is difficult to draw any meaningful conclusions about the structure of 2010 aggregation season. Figure 14: Spring 2010 Daily Detections Number of Detections 800 600 400 200 0 Mar/01 Apr/01 May/01 Jun/01 2010 Habitat Use: Analyzing the distribution of detections is less complicated by the shifts in effort. As all tagged sharks are detectable by all receivers, increases in 36 transmitter effort affect the entire array equally. Therefore, tagging additional sharks should not have any impact on the distribution of detections. Changes in receiver effort, on the other hand, alter the distribution because older receiver stations have had more time to accumulate detections. Fortunately, this can be easily accounted for by simply comparing each receiver’s rate of detections as opposed to the absolute number. This data shows a strong preference for the western areas of the reef, and a somewhat weaker preference for the north. The eastern areas of the reef were almost totally inactive, accounting for only 1% of daily detections (Figure 15). Vertical distribution is nearly identical to that found in overall data (Figure 10), and 95% of detections occur in the shallowest ten depth bins. Figure 15: 2010 WS Reef Detection Frequency 15.00 North WS Reef 10.00 West WS Reef East WS Reef 5.00 WS Line 24 WS Line 25 WS Line 18 WS Line 17 WS Line 5 WS Line 6 WS Line 7 WS Line 8 WS Line 4 WS Line 2 WS Line 1 0.00 WS Line 3 Detections/Day 20.00 2010 Sexual Segregation: Even under closer examination, there is still no evidence of temporal segregation of the sexes. There are some peaks in activity of one gender which correspond to valleys in the activity of the others. Examples include the 18th and the 27th of April. However these incidents are usually composed of only a few individuals (2 male and one female on the 18th, 1 male and 3 female on the 27th) and even though the detection ratio is skewed to one of the genders, there are still points of close interaction between sharks of differing sex. There are also peaks which are shared by 37 both genders, which includes the 7th and 12th of May. These are also composed of few individuals (2 males and 2 females on the 7th, 3 males and 2 females on the 12th). Still, as both sexes were frequently detected at the same times, temporal segregation of the sexes did not occur during this season (Figure 16). Figure 16: 2010 Detections By Gender 500 400 300 Females Males 200 100 0 01/Mar 01/Apr 01/May 01/Jun Habitat use is still similar between the sexes at this scale, as is distribution through depth. West WS Reef accounted for 71% of male detections/day and nearly 80% of female detections/day. East whale shark reef accounted for only 1.1 and 1.3% respectively (Figure 17). Depth detections were predominantly shallow, with 96% of female and 90% of male detections occurring in the shallowest 10 depth bins, and 46/36% occurring at or near the surface. Figure 17: 2010 Detection Frequency by Gender Females Males 10 8 6 4 2 WS Line 24 WS Line 25 WS Line 18 WS Line 17 WS Line 5 WS Line 6 WS Line 7 WS Line 8 WS Line 4 WS Line 2 WS Line 1 0 WS Line 3 Detections/Day 12 38 Off Season: There is no real structure to the off season (July-December). There are only a few scattered patches of whale shark activity during this period. These always involve a single individual and last no longer than a few days. What makes the off season worth mentioning is the distribution of detections. The preference for WS Reef vanishes during this period, with only 25% of off season detections occurring on WS Reef receivers. Two individuals were never detected in both spatial and temporal proximity to one and other, as such it is impossible to judge sexual segregation over this period. January and February: January and February saw whale activity increase by approximately an order of magnitude. Ten sharks from the 2010 season (5 males, 4 females, 1 undetermined) returned to record a total of 886 detections during this period. The sharks did show a preference for WS Reef (64% of total detections), though less than that observed during the aggregation season. There was no evidence of sexual segregation during this period. 2011 Season Structure: The 2011 season was characterized by several small peaks and valleys in activity which increased in magnitude as the season progressed. This was punctuated by a single massive spike in detections which occurred from April 23-26. The spike accounted for 43% of all detections during this season, and included 18 of the season’s 36 sharks to log acoustic transmissions (seven male, seven female, four undetermined). Receiver effort was standardized throughout the 2011 season, and 75% of the detections composing the spike were recorded from animals tagged more than a week prior. After the 26th, whale shark activity declined by more than order of magnitude and remained low for the rest of the season (Figure 18). Number of Detections 39 1500 Figure 18: Spring 2011 Total Daily Detections 1000 Total Detections 500 0 01/Mar 01/Apr 01/May 01/Jun Thirteen whale sharks which were tagged in 2010 returned during the 2011 season, including five males, three females, and five undetermined. They recorded 5180 transmissions throughout the season. Six of these were present during the April 23-26 spike, logging 2242 detections. They included two males, two females, and two undetermined. 2011 Habitat Use: The distribution of whale sharks throughout WS reef was very different in 2011 as opposed 2010. Preference for the western edge of the reef was absent, though preference for the north remained. Activity in East WS Reef was 30 times higher than in 2010 (Figure 19). Much of the difference is due to an abrupt change in habitat use during the April 23-26 spike. This period accounts for over 75% of activity on East WS reef and was also characterized by reduced activity in the western regions (Figure 20). If this four day period is removed, then the distribution of daily detections becomes much more similar to that seen in 2010 (Figure 21). Depth distribution was shallow, both for the season in general and for the spike in particular. Figure 19: 2011 WS Reef Detections/Day 30 North WS Reef West WS Reef 20 East WS Reef 10 WS Line 24 WS Line 25 WS Line 18 WS Line 17 WS Line 5 WS Line 6 WS Line 7 WS Line 8 WS Line 4 WS Line 2 WS Line 1 0 WS Line 3 Detections/Day 40 Detections/Day Figure 20: April 23-26 2011 Detections/Day 400 North WS Reef 300 West WS Reef 200 East WS Reef 100 WS Line 24 WS Line 25 WS Line 18 WS Line 17 WS Line 5 WS Line 6 WS Line 7 WS Line 8 WS Line 4 WS Line 2 WS Line 1 Figure 21: 2011 Detections/Day Without April Spike North WS Reef West WS Reef WS Line 24 WS Line 25 WS Line 18 WS Line 17 WS Line 5 WS Line 6 WS Line 7 WS Line 8 WS Line 4 WS Line 2 East WS Reef WS Line 1 14 12 10 8 6 4 2 0 WS Line 3 Detections/Day WS Line 3 0 2011 Sexual segregation: Sexual segregation did not occur during the 2011 season. Sharks of both genders were present at similar times and utilized similar habitat (Figures 22 and 23). This is true both for the season in general and for the spike in activity which occurred in late April (Figure 24). WS Line 24 150 WS Line 24 WS Line 25 WS Line 18 8 WS Line 25 WS Line 18 WS Line 17 01/May WS Line 17 WS Line 5 WS Line 6 400 WS Line 5 WS Line 6 WS Line 7 WS Line 8 WS Line 4 01/Apr WS Line 7 WS Line 8 WS Line 4 WS Line 2 0 01/Mar WS Line 2 200 WS Line 1 WS Line 3 Detections/Day 10 WS Line 1 WS Line 3 Detections/Day 41 800 FIgure 22: 2011 Detections by Gender 600 Males Females 200 01/Jun FIgure 23: 2011 Detection Frequency by Gender Females 6 Males 4 2 0 FIgure 24: April 23-26 Detection Frequency by Gender Females Males 100 50 0 42 Discussion Seasonality and Habitat Use This study represents the first assessment of the Red Sea whale shark aggregation. Analysis of broad patterns of whale shark presence/absences has revealed that the whale sharks aggregate in the spring, and that they prefer WS reef and the area immediately surrounding it. The story becomes more complicated when the data is analyzed at a finer scale. Detections were not evenly distributed through either of the aggregation seasons, or during the moderate levels of activity observed in January and February. Many of the detections during these periods were part of short-lived but intense spikes in whale shark presence. This was also true of the offseason, though the spikes were less intense, composed of detections from lone individuals, fewer, and further between. The spatial distribution also changed with time. The preference for WS Reef was strong in the 2010 season, absent in the off season, and intermediate during January and February. Data is still being gathered on the 2011 season, but the available information suggests some level of fidelity of WS Reef during this period. At finer spatial scales, it becomes apparent that not only do aggregating sharks prefer WS Reef over the surrounding regions, but they also prefer certain parts of the reef over others. Overall, receivers installed in on western side of the reef recorded more activity than their eastern counterparts. This was particularly true during the 2010 season in which the eastern receivers were almost completely 43 inactive. This is contrasted by the 2011 season which had much less difference between the eastern and western regions. Part of the difference was due to the dramatic change in whale shark behavior observed from April 23rd to the 26th 2011. Detections in the offseason were too few and too sporadic for fine-scale habitat use to be assessed for this period. Vertical habitat was predominantly shallow across all seasons and for both genders which correlates with other studies (Wilson et al, 2006). Sexual Segregation Both the broad and fine scale analysis failed to find any evidence of sexual segregation occurring within this aggregation. The gender ratio of observed sharks is effectively one to one. In addition, tagged sharks of differing genders have often been detected around the same receiver, at the same time. This complete lack of gender segregation is very nearly unique among studied aggregations, which are usually dominated by males (Norman and Stevens, 2007)(Graham and Roberts, 2007)(Rowat et al, 2011)(Riley et al, 2010)(Pierce et al, 2008)(de la Parra, unpublished data). While the Gulf of Baha (RamirezMacias et al, 2006) and the Philippines (Quiros, 2008) aggregations also have gender ratios close to even, neither has been scrutinized at this fine a scale with regard to gender separation. Male and female sharks at these sites may occur at different times, and possibly use different areas within the aggregation. Site Fidelity 44 The array did find evidence of phylopatry. Sixteen of the thirty-seven the sharks tagged in the spring of 2010 returned to the area at some point in 2011. Three additional sharks which were sighted and photographed in 2010 were resighted and tagged in 2011. One of these, WS 103, had also been sighted in 2009 when the aggregation was first discovered. This brings our total detected phylopatry to nineteen sharks. WS 025, a shark tagged in 2010, lost its acoustic tag at some point between February 13th 2011 (the last time its old tag was detected) and April 20th 2011 (when it was retagged.) Fortunately it could be identified using photo analysis of the spot pattern. Still this case confirms that whale sharks are capable of shedding tags possibly causing us to underestimate the number of returning sharks. Other aggregations have reported returning individuals, and only further investigation will allow for comparisons in site fidelity to be made (Rowat et al, 2011). Importance of this Study As this aggregation was previously unstudied, one of the most important aspects of this project was to highlight areas of interest which warrant further research. The causes of the aggregation in general and of the short, intense activity spikes in particular remain unclear. Many aggregations have been linked to seasonal increases in food availability (Taylor, 1996) (Heyman et al, 2001) (Clark and Nelson, 1997) (Rowat et al, 2011), (Gifford, 2002), and most of the sharks tagged for this study were discovered while feeding. It remains unlikely that this is a breeding aggregation as all individuals were believed to be immature. The 45 clasper morphology of all observed males was undeveloped and not yet useable for mating. Additionally, all encountered whale sharks were judged to be smaller than 7 meters, far below suspected sizes of maturity (Norman and Stevens, 2007). If breeding is not occurring, then why is the sexual segregation so prevalent in other aggregations absent here? What causes some sharks to return in subsequent years while others do not? Answering these questions should be a priority for future shark work in the area. Plankton sampling could be used in conjunction with continued acoustic monitoring to determine if food is whale sharks’ primary motivation behind aggregating. Measurement and comparison of environmental factors between this site and segregated sites could give insights into the causes behind these behaviors. Photo and tag identification over long time periods could be used to determine how long individuals remain loyal to the site. If cameras are equipped for laser photogrammetry then accurate size estimates could also be obtained and growth rate determined over multiple seasons. The current data set is hardly exhausted, and more can be learned about this aggregation without the need of additional field work. Finer temporal analysis could be used to determine if there are diel patterns to the behavior of aggregating sharks, and individual variation between sharks also needs to be assessed. In addition to the potential impact on research, the information provided here is also relevant to conservation efforts. The whale shark is considered vulnerable by the IUCN, and the discovery and analysis of unique and potentially vital 46 habitat is of significant value. Additionally, knowledge of the seasonality and distribution of the aggregation can be beneficial to local management as potentially harmful gears such as gill nets can be seasonally or regionally banned. Summation This is the first use of acoustic monitoring to analyze a whale shark aggregation. It confirms that this technique is capable of determining the temporal and spatial characteristics of such sites and producing data which is relevant to ongoing research and conservation efforts. 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