Photosynthesis: Assimilate partitioning

Photosynthesis: Assimilate partitioning
Getting the building blocks for growth and cell wall
biosynthesis from the leaf tissue to actively growing
organs.
Bob Turgeon
Vacuole
Mesophyll
pH = 5.5
pH = 7.3
∆E = -180 mV
H+
Plasmodesmata
Sucrose
Sucrose
H+
amino acids
PM-ATPase
ATP
Sucrose
amino acids
chloroplast
proton-coupled symporters
Apoplastic phloem loading
Phloem
CO2
Water
mass flow
pH jump forms
trans-membrane pH gradient
potassium & valinomycin
form defined membrane potential
14C-substrate
pH = 8.0
Κ
+
pH = 6.0
14C-substrate
pHi = pHo
Negative membrane potential
1200
Sucrose Transport
pmol/ mg p
CCCP
800
400
0
0.0
2.0
4.0
Time (min)
6.0
Plasma Membrane
Cytoplasm
Extracellular
DEPC
Binds to a substrate
protectable site
(∆ Ψ sensitive?)
CHSuc
CHSuc
H
+
Sucrose
Proton-sucrose
symporter
C
Sucrose
+
H
C
(∆ Ψ sensitive?)
SH
PCMBS
Properties of the Proton-Sucrose Symporter
Apparent Kmm
Sucrose
Protons
Inhibitors
DEPC
PCMBS
pH Optimum
Stoichiometry
1.0 mM
µM
0.7
I 50
50= 750 µM
I 5050= 30 µM
< 6.0
1:1
Location
Plasma Membrane
Specificity
Low Affinity For:
glucose, fructose
raffinose, maltose
mannose, lactose
and melibose
Amino Acid Import
Developing leaves,
fruit, and seed
Amino acids are the currency
of nitrogen allocation in
multicellular plants.
Amino Acid Import
Mature leaves
Am ino Acid Export
Primary Assimilation
Amino Acid Cycling
(xylem to phloem)
Root
Amino Acid Import
Amino Acid Export
Primary Assimilation
Amino Acid Cycling
(phloem to xylem)
Developing roots
and meristem
Amino Acid Import
Phloem
Xylem
Strategies for identifying symporter proteins and genes ….
• Biochemical
Differential labeling
Photoaffinity labeling
Solubilization & reconstitution
• Molecular
PCR
Mutants
Functional complementation
Molecular Cloning via Functional Complementation
Positive Transformant
Yeast Mutant
Transform mutants with a plant cDNA library
constructed in a yeast expression vector
Biochemically limitedand
transport incompetent
H
Expression
Vector
+
ATP
With successful transcription,
translation, and insertion, we
select for plant transporterdependent growth.
Screen for restored growth
on a limiting medium
Limiting Substrate
0.8
A
B
2.0
Alanine Transport
(nmol/ mg cells)
Histidine Transport
(nmol/ mg cells)
0.6
0.4
0.2
1.0
0.0
0.0
0.0
4.0
8.0
Time (min)
12.0
16.0
0.0
2.0
4.0
Time (min)
6.0
3
400
300
200
100
Hydrophobic
3
2
1
0
-1
-2
2
1
0
-1
-2
-3
*
*
Hydrophilic
*
200
Amino Acid Position, N to C
100
-3
400
300
Terminal
C
1
2
3
4
5
6
7
8
9
10
11
N
Structure no. 1
CYTOPLASM
1
2
3
4
5
6
7
8
9
10
C
N
CYTOPLASM
Structure no. 2
Proton-Sucrose Symporter
1
2
3
4
5
N
6
7
8
9
10 11 12
C
CYTOPLASM
Cytoplasmic side
Random Mutagenesis
silent mutations, nonsense mutations, substitutions, premature stops
Transform into yeast
Screen for altered transport phenotypes
0.6
Maltose transport
(nmol / mg FW . min)
0.5
0.2 mM
0.4
0.5 mM
0.3
1 mM
0.2
2 mM
0.1
0
Wt
Mal9 (G334S)
Construct
H65
1
2
G334
3
4
N155
N
5
6
7
8
9
L461
10
11
12
Q249
W250
Cytoplasmic
C
Mesophyll
Vacuole
NO3
H
Plasmodesmata
+
Sucrose
amino acids
Sucrose
ATP
Sucrose
+
H
Amino acids
amino acids
chloroplast
1. Sucrose symporters
serve both source and
sink tissues
Sink Tissue
Vacuole
amino acids
hexose
Phloem
CO2
water
mass flow
symplastic
Sucrose
sucrose
Amino acids
amino acids
Vacuole
water
2. BUT, there is at least one other way to generate the hydrostatic pressure difference
Phloem Loading in a “Symplastic System”
Also depends on accumulating high
concentrations of solutes, but in this case,
the “sugar” is synthesized in place, not
transported into the CC/SE complex.
Sucrose diffuses into the companion cell
X
H2O
Synthesize high concentrations of raffinose &/or stachyose in the companion cell
(intermediary cell). Raffinose is too large to diffuse back into bundle sheath cell via
plasmodesmata. This generates a high osmotic concentration that results in water
influx and high hyrodstatic pressure that drives phloem transport to sinks.
Direct evidence of pressure flow: the aphid.
25 µm
Sievetube
member
Sap
droplet
Aphid feeding
Stylet
Stylet in sieve-tube
member (LM)
Sap droplet
Severed stylet
exuding sap
What happens when sucrose gets to the importdependent organs?
It is unloaded from the companion cell/ sieve
element complex via apoplastic and symplastic
pathways.
The movement of sucrose from sources to sinks is
called assimilate partitioning. Controlling this
process could have a profound impact on crop yield.
Mesophyll
Vacuole
NO3
water
H
Plasmodesmata
amino acids
ATP
Sucrose
Sucrose
+
H
TP
Sucrose
Amino acids
amino acids
chloroplast
Sink Tissue
Vacuole
Phloem
CO2
+
mass flow
amino acids
H+
hexose
symplastic
Sucrose
sucrose
H+
?
Vacuole
Apoplastic model of phloem loading
?
Amino acids
amino acids
water
SUCROSE
SYMPORTER
PHOTOSYNTHETIC
ACTIVITY
SINK ACTIVITY
H2 O
CO2
time
transpirational
feeding
(pmol / min/ mg protein)
Transport Activity
2500
2000
1500
Suc
Gluc
Ala
1000
500
0
0
100
200
mM Sucrose Fed 24 Hours
• Are changes in sucrose transport activity due to osmotic effects?
No. KCl, sorbitol, mannitol have no effect.
• Is the observed regulation sucrose-specific?
Yes. Hexoses and hexose analogs are not effective.
• What happens to sucrose transport activity?
Km remains unchanged. Vmax decreases.
• How?
BvSUT1 mRNA and protein decrease with 2 hr half-lives
Transcription is controlled by a sucrose sensing protein-phospho relay
and overall transport capacity is directly proportional to transcription
Jen Chiou, Matt Vaughn, Wendy Ransom-Hodgkins, Greg Harrington
Sucrose Sensor
Sucrose
Kinase
Protein
Turnover
mRNA
Turnover
B
A
Phloem
Loading
Sucrose
Symporter
Transcription
Phosphatase
All within the companion cell
High rate of
symporter
transcription
Sucrose
Less symporter
protein
Sucrose
H+
Down-regulation of
symporter
transcription
Abundant
symporter
protein
High rate
of sucrose
export
PHLOEM
PHLOEM
H+
High Sink
Demand
Sucrose-signaling
response pathway
Sucrose
accumulation in
the phloem
Low rate of
sucrose
export
Low Sink
Demand
How can we identify players in the sucrose signaling pathway?
1. Mutagenize SUT1promoter::reporter plants and screen for
mutants that lack the sucrose signaling pathway
2. Use expression profiling of companion cells to identify
specific kinases and phosphatases, then look at phenotypes of
knockouts
3. Look for a sucrose response that is more tractable for
genetic analysis
Water
Four day old seedlings induced with 90 mM sugar treatments
and photographed three days later.
8
7
6
5
4
3
2
Sorbitol
sorbitol
Maltose
Mannose
Gluc + Fruc
Fructose
maltose
mannose
Glucose
H20
PAP1 (Production of Anthocyanin Pigment 1) Transcription factor ‐ known “master”
regulator of anthocyanin biosynthesis and part of a multi‐peptide complex
Sucrose
gluc+fruc
fructose
glucose
sucrose
1
0
water
A530-A657/gFW
Anthocyanin Content
PAP1
ACTIN
Pro 8
H2O
Pro 62
SUC
H2O
Col-0
Pro 63
SUC
H2O
SUC
35S-GUS
1 mm
H2O
SUC
H2O
SUC
Pro 8
H2O
Pro 62
SUC
Wg 34
H2O
H2O
Pro 63
SUC
H2O
Wg 35
SUC
Col-0
H2O
Wg 43
SUC
H2O
35S-GUS
1 mm
H2O
SUC
H2O
SUC
SUC
SUC
ΔIntron1 2A
H2O
SUC
ΔIntron2 3A
H2O
SUC
ΔIntron1&2 4A
H2O
SUC
ΔIntron1 3B
H2O
SUC
ΔIntron2 5B
H2O
SUC
ΔIntron1&2 6A
H2O
SUC
SURE-1
5’-upstream sequence
ATG
I
I
200 bps
SURE-2
II
= exon
III
PAP1 gene
= intron
SURE-1 (TTTTCTATT) mutated to TTTGAGATT
I
II
III
GUS
PAP1wg_mut1-GUS
SURE-1 (TTTTCTATT) mutated to SURE-2 (AATACTAAT)
I
II
III
GUS
PAP1wg_mut2-GUS
GUS
PAP1wg_mut3-GUS
GUS
PAP1wg_mut4-GUS
205 bp deletion (includes SURE-1)
I
II
III
205 bp deletion (excludes SURE-1)
I
II
III
GLU
SUC
+ SURE-1, - 5’
H20
GLU
SUC
Minus SURE-1
H20
GLU
SUC
∆ SURE-1
H20
GLU
SUC
H20
∆ SURE-1
PAP1
GUS
ACTIN
4 day old plants, 4 hr induction
Biotech Approach to Increase Yield:
Use sugar beet as a model biofuel crop by
by manipulating sugar allocation in the
plant’s vascular system.
Why sugar beet as a model for carbon
partitioning
• Root yields of over 40 tons per hectare at
15.5-18% sucrose content (6-7 tons of sugar
per hectare)
Record yields approach 25% sucrose, so
there is somewhere to put “extra” sucrose
•
Approach: Constitutively express hyper-active symporter
Hypothesis:
This will draw down sugars in photosynthetic cells which will,
1) Increase photosynthesis
2) Delay senescence
vacuole
Leaf mesophyll
Phloem
Plasmodesmata
H+
Sucrose
CO2
ATP
Sucrose
Sucrose
?
H+
chloroplast
mass flow
CmGAS1p
AtSUC1H65K
TT
Sucrose
?
257
248
239
230
226
202
139
121
46
43
13
Independent transgenic lines
8
Control 2
Control 1
The modified SUT is expressed in the transgenic lines
*
Independent transgenic lines
p-value ≤ 0.01
SUT-257
SUT-248
SUT-239
SUT-226
SUT-202
SUT-139
SUT-121
SUT-46
SUT-43
SUT-13
SUT-230
*
*
SUT-8
900
800
700
600
500
400
300
200
100
0
Control
average tuber FW (g)
Average tuber FW of control and
transgenic lines
35
*
* *
*
30
25
20
15
10
5
Independent transgenic lines
p-value ≤ 0.01
p-value ≤ 0.05
SUT-257
SUT-248
SUT-239
SUT-230
SUT-226
SUT-202
SUT-139
SUT-121
SUT-46
SUT-43
SUT-13
SUT-8
0
Control
average above ground
biomass (g)
Average above ground biomass of
control and transgenic lines
average tuber FW/leaf DW
50
45
40
35
30
25
20
15
10
5
0
Independent transgenic lines
SUT-257
SUT-248
SUT-239
SUT-230
SUT-226
SUT-202
SUT-139
SUT-121
SUT-46
SUT-43
SUT-13
SUT-8
Control
Average tuber FW/leaf DW of control
and transgenic lines
Rice as a model crop for identifying biomass
genes
Rationale:
The Green Revolution was about seed production, not biomass
Rice is a great model for new energy crops because ……….
ƒ Simple grass
ƒ Gene synteny
ƒ Ag-infrastructure well
established
ƒ Powerful genetic,
molecular, and genomic
tools
OryzaSNP set
ƒ 20 diverse rice lines
• resequenced for SNP discovery
PNAS 106:12273-12278 2009
Approach:
• Define morphological and physiological differences
• Forward genetic screens
• QTL mapping
• Association mapping
• Transgenic manipulation of candidate genes
knockout, over‐expression, truncated proteins
OryzaSNP set
• Sampling
– Morphological
• leaf length & width, plant height, tiller number, and total above ground biomass (3‐fold) and seed yield (inverse of biomass)
– Physiological
• Leaf area index, photosynthetic rates, cellulose and lignin content of leaves and stems
OryzaSNP set
• Significant genetic variation for both morphological and physiological data
• Heritability
• Photosynthesis
– M2O2 and Cypress
• Highest photosynthetic rate
– Pokkali
• Lowest photosynthetic rate, largest biomass
– Why PS not correlated to total biomass
Mutant populations:
chemical and fast neutron
Amino Acid Transporters & Nitrogen regulation
of gene expression
Lishan Chen
Hui-Chu Chang
Adriana Ortiz-Lopez
Aaron Schmitz
Ekrem Dundar
Mengjuan Guo
Xianan Liu
Vince Stoerger
Christian Hermans
Silvana Porco
Sucrose Transporters and gene regulation
Tzyy-Jen Chiou
Jade Lu
Matt Vaughn
Wendy Ransom-Hodgkins
Greg Harrington
Anshuman Kumar
RICE
Jan Leach
John McKay
Hei Leung - IRRI
Bettina Broeckling
Courtney Jahn
USDA-ARS, DOE, & NSF