Ecological Modelling 134 (2000) 245 – 274 www.elsevier.com/locate/ecolmodel Copepod food-quality threshold as a mechanism influencing phytoplankton succession and accumulation of biomass, and secondary productivity: a modeling study with management implications D.L. Roelke * Department of Wildlife and Fisheries Sciences, Texas A&M Uni6ersity, College Station, TX 77843 -2258, USA Received 14 September 1999; received in revised form 2 February 2000; accepted 6 June 2000 Abstract Development of proactive management schemes may be necessary to combat the apparent worldwide increase in harmful algal blooms. Design of such schemes will require a thorough understanding of bloom-initiating processes in an ecosystem context. To further explore potential synergistic effects between abiotic and biotic processes impacting plankton community dynamics a detailed numerical model was developed and tested. The model featured multiple growth limiting resources (nitrogen, phosphorus, silica, light), multiple phytoplankton groups (P-specialist, N-specialist, intermediate group), aspects of the microbial loop (labile dissolved organic nitrogen, bacteria, microflagellates, ciliates), and a capstone predator (copepods). Model simulations illuminated the potential role of food-quality threshold as it effected initiation of an algal bloom. The mechanism controlling whether a bloom would occur and secondary productivity cease was the timing of the onset of bottom – up control (nutrient limitation) relative to top–down control (high grazing pressure). Simulations where top – down control occurred before bottom – up control were characteristic of Lotka–Volterra type behavior. However, during simulations where top – down control began after bottom–up control an algal bloom resulted and secondary productivity ceased. This occurred because at the time of maximum grazing activity the N-content of one of the phytoplankton groups was below the food-quality threshold for copepods. Consequently, copepod growth was not great enough to offset losses. As a result, the copepod population was eliminated and an algal bloom ensued. The timing of the onset of bottom – up and top – down control was sensitive to some abiotic conditions that included magnitude, mode, and ratio of nutrient loading. Through manipulation of these abiotic processes, it was possible to maintain phytoplankton species diversity, enhance secondary productivity, and prevent an algal bloom. © 2000 Elsevier Science B.V. All rights reserved. Keywords: Food-quality threshold; Plankton dynamics; Copepod growth * Tel.: +1-409-8450169. E-mail address: [email protected] (D.L. Roelke). 0304-3800/00/$ - see front matter © 2000 Elsevier Science B.V. All rights reserved. PII: S 0 3 0 4 - 3 8 0 0 ( 0 0 ) 0 0 3 4 6 - X 246 D.L. Roelke / Ecological Modelling 134 (2000) 245–274 1. Introduction Abiotic and biotic processes influencing the succession of species within phytoplankton communities and accumulation of algal biomass are many and their synergism complex (Sommer et al., 1986; Odum et al., 1995; Roelke et al., 1997; Breitburg et al., 1999). With the apparent worldwide increase in harmful algal blooms and resulting diminished quality of aquatic ecosystems (see Anderson and Garrison, 1997), there is a need for implementation of proactive management schemes aimed at sustaining or restoring the quality of the natural environment. Detailed models built on our understanding of the mechanisms that underlie phytoplankton community succession, accumulation of algal biomass, and triggering of algal blooms must guide the design of such management schemes. Attempts at modeling planktonic ecosystems to this degree, however, have been few (Franks, 1997). Many models exist, conceptual and numerical, which elucidate mechanisms underlying phytoplankton community succession (Tilman, 1977; Ebenhoh, 1988; Sommer, 1989a,b; Montealegre et al., 1995; Roelke et al., 1999). From an ecosystem perspective, these models are appealing because most consider multiple phytoplankton species, multiple limiting resources, and preferential grazing effects, thereby presenting a more holistic view of the natural environment. To explain occurrence of algal blooms in the context of these models, however, mechanisms that either reduce grazing losses of a specific phytoplankton species, or inhibit growth of competing algae, must be invoked. Such mechanisms are not always well understood and the formulations used to incorporate these processes into models may not be accurate over a wide range of environmental conditions. Regarding conceptual models, they are further limited in that they do not lend themselves to addressing the influence of physical processes on plankton community dynamics. Other modeling efforts, which do not incorporate mechanisms that reduce grazing or inhibit growth of competitors, have demonstrated mathematically that algal blooms can occur simply through a decoupling of grazing processes and algal growth (Kishi and Ikeda, 1986; Truscott, 1995; Hessen and Bjerkeng, 1997). This can occur through differential physical mixing or migration between phytoplankton and zooplankton, as well as through shifts in resource availability coupled to differential response times between phytoplankton and zooplankton. These models are appealing because they do not ‘force’ blooms. Rather, the mechanisms underlying bloom formation are a result of synergistic effects between well understood biotic and abiotic processes. Most numerical models of this nature, however, do not incorporate multiple species, multiple limiting resources, or preferential grazing processes. As a result, they are less representative of the natural environment. The primary goal of this research was to develop a more complex numerical model where both abiotic and biotic processes controlled plankton dynamics, and to use the model to explore synergistic effects of multiple mechanisms known to influence phytoplankton community succession, accumulation of algal biomass, and secondary productivity. Emphasis was placed on the role of nutrient loading magnitude, mode of nutrient loading, and the ratio of loaded nutrients because they may represent the most feasible of plankton management options. It was not the intent of this research to produce a predictive model, i.e. a tool for design of management schemes. Rather, the intent was to generate a tool to be used to elucidate potential algal bloom mechanisms and determine sensitivity of such mechanisms to various abiotic and biotic processes. It is the hope of the investigator, however, that future models built from the model presented here will be tailored to target systems, and perhaps useful for management purposes. Reference to the parameterization of the model is incorporated in Appendix A. 2. Basis of model design Although the following model was not designed for predictive purposes, it still had to behave in a manner reasonable to the natural environment. Therefore, the model was constructed based on D.L. Roelke / Ecological Modelling 134 (2000) 245–274 prior knowledge of a natural system (Roelke, 1997; Roelke et al., 1997), the Nueces River estuary (NRE). Notable features of NRE at the times of sampling were that the nutrient inputs from the Nueces River and a nearby sewage treatment plant eclipsed nutrient inputs from the sediments, and that the system was vertically well mixed. Therefore, to represent NRE a box model was developed that did not incorporate sediment effects. Because inorganic nitrogen species (N), phosphate (P), and silicate (Si) appeared to influence the composition of the phytoplankton community in some parts of NRE, they were incorporated in the model. In addition, the hydrology of NRE influenced plankton community dynamics. To account for this, hydraulic residence time in the form of advective inputs and losses were built into the model. It was not possible to include a separate category for all of the algal groups found in NRE and still parameterize them in the context of the model (see Nielsen, 1994). Instead, three functional groups were developed, an N-specialist, a P-specialist, and an intermediate group. The parameterization of the three functional groups were mostly based on a dinoflagellate, Prorocentrum minimum (Sciandra, 1991), a green alga, Selenastrum minutum (Elrifi and Turpin, 1985), and a diatom, Skeletonema costatum (DeManche et al., 1979), respectively. Regarding N- and P-related parameters, the differential equations and parameter values used were from a previous modeling study (Roelke et al., 1999). These equations were appealing because they described growth as function of the cell-quota (Droop, 1973, 1983), nutrient uptake as a function of resource availability and cell starvation status (Zevenboom and Mur, 1979; Goldman and Glibert, 1982; Riegman and Mur, 1984), and luxury consumption of nutrients as a function of eventual limiting and non-limiting nutrients (Zonneveld, 1996). To better characterize the phytoplankton groups additional equations were added to account for light variability, silica availability (for the intermediate group only), grazing susceptibility, mortality, respiration and exudation. 247 Not sampled directly in NRE, but considered an important feature of foodwebs in general, was the microbial loop. The role of bacteria as remineralizers of, and competitors for, inorganic nutrients is well documented. Furthermore, the role of the microbial loop in plankton dynamics, whether viewed as an alternative pathway for nutrient transfer to higher trophic levels or as a mechanism returning nutrients to lower trophic levels, is important (Fuhrman, 1992). Therefore, the microbial loop was built into the model and was represented by including pools representative of labile dissolved organic nitrogen (DON), bacteria, microflagellates, and ciliates. Larger zooplankton were represented in the model by including a copepod pool, which was the capstone predator in the model, i.e. they were able to graze on the phytoplankton groups and the ciliate group. Copepods were selected as the capstone predator because of their abundance in an adjacent ecosystem, the Nueces Bay, their known ability to crop primary productivity in estuaries, and their relative dominance in coastal ecosystems over other large zooplankton, e.g. cladocerans (Dagg et al., 1991; Buskey, 1993; Horne and Goldman, 1994). The influence of a ‘higher trophic’ level that fed on the copepods and ciliates was incorporated in the model, but this pool did not have a biomass component. Throughout the model presentation the subscripts i and j were used in many of the equations. Each had a value between 1 and 3 and represented different pools of the model as follows: i= 1, intermediate algae group; i= 2, P-specialist; i= 3, N-specialist; j = 1,copepods; j = 2, ciliates, and j= 3, microflagellates. Subscript notation was also used to identify a term with a specific parameter and currency. For example, ExcertionGP signifies the processes of excretion due to grazers (G) in regards to phosphorus (P). Some of the equations in the model were designed to conserve currencies (N, P, Si) of the model. For example, respiration losses to bacteria in the form of cells l − 1 day − 1 were balanced with a loss of N from this pool in the form of mmol N l − 1 day − 1, which is defined in model as remineralization of N. 248 D.L. Roelke / Ecological Modelling 134 (2000) 245–274 A graphical representation of the pools comprising the model and the interactions between the pools is shown in Fig. 1. The differential equations are first shown with descriptive terms, followed by the equations that define each of the terms. Values assigned to parameters are referenced in Appendix A. The model is solved using an ordinary differential equation solver (Matlab™) that is based on fourth-order Runge – Kutta methods (The MathWorks 1997). 3. Differential equations of the model with descriptive terms 3.1. Phytoplankton cell concentration (i= 1, 2, 3) dfi =Growthfi − Respirationfi − Mortalityfi dt − Grazingfi − Advectionfi (1) Fig. 1. Graphical representation of the pools comprising the model and the interactions between the pools. Features of the model included multiple limiting resources, multiple phytoplankton groups, the microbial loop, and a capstone predator. The effects of irradiance and advection are not shown. D.L. Roelke / Ecological Modelling 134 (2000) 245–274 3.9. Labile organic N 3.2. Phytoplankton N cell-quota (i= 1, 2, 3) dQfiN =UptakefiN − DilutionfiN dt (2) dDON = SloppyG1DON + EgestionGDON dt + ExudationfDON + MortalityfDON 3.3. Phytoplankton P cell-quota (i= 1, 2, 3) dQfiP =UptakefiP − DilutionfiP dt 249 − UptakeBDON 9 AdvectionDON (9) (3) 4. Mathematics behind the descriptive terms 3.4. Bacteria 4.1. Phytoplankton growth dB =GrowthB −RespirationB −GrazingB dt −AdvectionB (4) 3.5. Zooplankton (j= 1, 2, 3) dGj =GrowthGj − RespirationGj −MortalityGj dt −GrazingGj − AdvectionGj Growthfi = mfifi (5) 3.6. Dissol6ed inorganic N dN =RemineralizationBN +ExcretionGN dt + MortalityGN −UptakefN,BN 9 AdvectionN (6) 3.7. Dissol6ed inorganic P dP =RemineralizationBP +SloppyG 1P dt + MortalityfP,GP +ExudationfP (7) 3.8. Dissol6ed inorganic Si dSi =SloppyG1Si +EgestionGSi +Exudationf 1Si dt + Mortalityf 1Si −Uptakef 1Si 9 AdvectionSi (8) (10) where mfi is the specific growth rate of the group (day − 1) and fi is the cell concentration of the group (cells l − 1). The specific growth rate was a function of intracellular N and P, similar to previous findings (Droop, 1983; Legovic and Cruzado, 1997), ambient Si concentration (for the intermediate group only), and irradiance. The equations for specific growth rate regarding intracellular N and P were identical to those of Roelke et al. (1999). For the intermediate group, which was based on a diatom, the specific growth rate as a function of ambient Si concentration was expressed with: mf 1Si = mmax,f 1Si + ExcretionGP +EgestionGP − UptakefP,BP 9AdvectionP Phytoplankton growth rate was a function of available nutrients and light similar to previous modeling studies (Somlyody and Koncsos, 1991; Montealegre et al., 1995; Legovic and Cruzado, 1997; Roelke et al., 1999). Growth for each group (cells l − 1 day − 1) was expressed as: Si kf 1Si + Si (11) where mf 1Si is the Si-limited specific growth rate, mmax,f 1Si is the maximum Si-limited specific growth rate, Si is the ambient concentration of Si (mmol Si l − 1), and kf 1Si is the half saturation constant for Si-dependent growth (mmol Si l − 1). Because specific growth rate has not been linked to the Si content of diatom cells, a standard Monod relationship (Monod, 1950) was used instead of a cell-quota formulation. Specific growth rate as a function of irradiance (day − 1) for each of the phytoplankton groups D.L. Roelke / Ecological Modelling 134 (2000) 245–274 250 followed a previous formulation (Platt, 1986): Vfi =Vmax,fi (1− e − Af i ) (12) where Vfi is the light-dependent specific growth rate (day − 1), Vmax,fi is the light-dependent maximum specific growth rate (day − 1) and the scalar factor, Afi, was defined as: afiI Afi = Vmax,fi (15) where rfi is a group specific scalar factor. Setting respiration equal to a fraction of the production was suggested elsewhere (Parsons et al., 1984; Geider, 1992). 4.3. Phytoplankton mortality (13) where afi was the slope of the photosynthesis – irradiance curve (cm2 s quanta − 1 day − 1) for each group and the irradiance was designated with the letter I (quanta cm − 2 s − 1), and other symbols were the same as defined Previously. The equations used to determine irradiance in the model accounted for the influence of depth and light attenuation in the water column, location on the surface of the Earth, time of day and year, and cloud cover (Brock, 1981; Montealegre et al., 1995). The photoinhibition factor was dropped from Eq. (12). For the purposes of this manuscript the maximum irradiance intensities were considered non-inhibiting. The specific growth rate for each phytoplankton group was then determined using Liebig’s Law of the Minimum (DeBaar, 1994; Legovic and Cruzado, 1997): mfi =MIN(mfiN, mfiP, mfiSi, Vfi ) Respirationfi = rfi Growthfi Mechanisms influencing phytoplankton mortality processes are not well understood (Walsh, 1983; Fasham et al., 1990). For example, parasitism by viruses, bacteria, protozoa, and fungi have been observed to terminate phytoplankton blooms (Shilo, 1971; Fay, 1983; Donk, 1989), yet factors effecting the growth and proliferation of these parasites are not well known. Therefore, the example of a previous model (Fasham et al., 1990) was followed and mortality (cells l − 1 day − 1) was made a function of a specific loss rate and cell concentration using: Mortalityfi = mfifi (16) where mfi is a group specific mortality rate (day − 1) and other symbols were the same as defined previously. 4.4. Phytoplankton grazing losses (14) where mfiN and mfiP are the N- and P-limited specific growth rate (day − 1), respectively, and other symbols are the same as defined previously. For the case of non-siliceous phytoplankton mSi was not part of Eq. (14). 4.2. Phytoplankton respiration Phytoplankton respiration is a complex process relating to irradiance, nutrient availability, nutritional status of the cell, and temperature (Riley, 1946; Geider, 1992). Modeling phytoplankton respiration as a function of these parameters was beyond the scope of this paper. Instead a simplistic formulation was used where the loss to each phytoplankton group due to respiration (cells l − 1 day − 1) was made a fraction of the phytoplankton group’s growth, and was depicted by: The loss to each phytoplankton group due to grazing from copepods (cells l − 1 day − 1) was a function of the copepod grazing rate and concentration, and was expressed with: Grazingfi = g1G1 QfixV,fi (17) where g1 was the copepod growth rate in terms of volume of prey (mm3 individual − 1 day − 1), G1 was the concentration of copepods (individuals l − 1), and QfixV,fi was the fixed cellular volume of the phytoplankton group (mm3 cell − 1). To simulate vertical migration behavior of copepods (see Horne and Goldman, 1994), losses to phytoplankton due to copepod grazing only occurred during night-time conditions. Copepod growth rate will be discussed in more detail with the zooplankton equations. D.L. Roelke / Ecological Modelling 134 (2000) 245–274 4.5. Phytoplankton uptake and dilution of inorganic N and P 4.7. Bacterial respiration The equations describing uptake of N and P, and cellular dilution are identical to those reported in Roelke et al. (1999). Uptake rates for N and P were not linked to irradiance. To prevent unrealistic accumulation of N and P within phytoplankton cells during night-time conditions, when growth was zero, uptake of N and P only occurred during day-time conditions. 4.6. Bacterial growth Growth of bacteria (cells l − 1 day − 1) was a function of the bacterial growth rate and concentration, and was expressed with: GrowthB = mBB (18) where mB is the specific growth rate of the bacteria (day − 1) and B is the concentration of bacteria (cells l − 1). By using this formulation, growth of the bacteria population was instantaneous, unlike the phytoplankton groups. The bacterial specific growth rate was dependent on the concentrations of ambient N, DON, and P, and a relationship between total N and P using Liebig’s Law of the Minimum (DeBaar, 1994). The N-and P-dependent specific growth rates of bacteria were determined using: mBN =mmax,B N+ DON ) kBN +N + DON (19) mBP =mmax,B P kBP + P (20) mB =MIN(mBN, mBP) 251 (21) where mmax,B is the maximum bacterial specific growth rate (day − 1), kBN and kBP were the half saturation constants for bacterial uptake of N and DON combined, and P (mmol N/DON l − 1, mmol P l − 1), DON was the ambient concentration of labile dissolved organic N (mmol DON l − 1), and all other symbols were the same as previously defined. Using a Monod formulation to relate bacteria growth to ambient nutrient availability was suggested elsewhere (Fasham et al., 1990). Loss from the bacteria pool due to respiration (cells l − 1 day − 1) was dependent on bacterial growth and biomass and was expressed with: RespirationB = r 1BGrowthB + r 2BB (22) where r 1B is the growth dependent respiration (unitless), r 2B was the biomass dependent respiration (day − 1), and all other symbols were the same as previously defined. Bacterial respiration was described with two terms because each is a function of different processes. For example, when bacteria growth was high the respiration loss was higher, which represented greater metabolic activity due to cell division. When growth was near zero, there was still a respiration loss that was a function of cell maintenance processes, but it was lower. 4.8. Bacteria grazing losses The loss of bacteria due to grazing (cells l − 1 day − 1) was a function of the grazing rate and the concentration of the microflagellate group, and was expressed with: GrazingB = g3G3 QfixV,B (23) where g3 is the microflagellate growth rate in terms of volume of bacteria (mm3 individual − 1 day − 1), G3 is the concentration of microflagellates (cells l − 1), and QfixV,B is the fixed volume of a bacterium (mm3 cell − 1). 4.9. Zooplankton growth Growth of each zooplankton group (individuals l − 1 day − 1) was determined by applying Liebig’s Law of the Minimum to the total N and P ingested relative to the fixed intracellular N and P composition of the zooplankton group using: GrowthGj = MIN IngestionGjN IngestionGjP , Qfix,GjN Qfix,GjP (24) where Qfix,GjN and Qfix,GjP are the fixed N and P intracellular composition of each zooplankton D.L. Roelke / Ecological Modelling 134 (2000) 245–274 252 group (mmol N individual − 1, mmol P individual − 1). The ingestion factors will be discussed next. By using this formulation copepod population growth was instantaneous, i.e. development of cohorts was not incorporated into the model, as in previous models (Nielsen, 1994; Norberg and DeAngelis, 1997). Total N, P and Si ingested (mmol N l − 1 day − 1, mmol P l − 1 day − 1, mmol Si l − 1 day − 1) for copepods was a function of the copepod grazing rate and concentration, and a sloppy feeding correction, and was determined using: g1G1QfiN g1G1Qfix,G 2N + QfixV,G 2 i = 1 QfixV,fi 3 IngestionG 1N = % (1− x) g1G1QfiP g1G1Qfix,G 2P + QfixV,G 2 i = 1 QfixV,fi 3 IngestionG 1P = % (25) (26) g1G1Qfix,f 1Si (1 − x) QfixV,f 1 (27) respectively, where QfiN and QfiP are the N and P cell-quota of the phytoplankton groups (mmol cell − 1), QfixV,G 2 is the fixed cellular volume of the ciliate group (mm3 individual − 1), x is a sloppy feeding constant specific to copepods (unitless), Qfix,f 1Si is the fixed Si content of the intermediate group, and all other symbols were the same as defined previously. Equations describing ingestion of N and P for ciliates and microflagellates were more simplistic because each only had one source of prey. For ciliates the equations were: g2G2Qfix,G 3N QfixV,G 3 (28) g2G2Qfix,G 3P QfixV,G 3 (29) IngestionG 2N = IngestionG 2P = and for flagellates the equations were: g3G3Qfix,BN QfixV,B (30) g3G3Qfix,BP QfixV,B (31) IngestionG 3N = IngestionG 3P = 4 g1 = % gmax1MIN k=1 uk − uthk (SZ :SP )k kG 1 + uTot (32) uk = f1QfixV,f 1, f2QfixV,f 2, f3QfixV,f 3, (33) or G2QfixV,G 2 uTot = f1QfixV,f 1 + f2QfixV,f 2 + f3QfixV,f 3 (34) + G2QfixV,G 2 (1−x) IngestionG 1Si = where Qfix,BN and Qfix,BP were the fixed cellular N and P content of the bacteria group (mm3 cell − 1), respectively, and all other symbols were the same as defined previously. The prey volume-based growth rate for copepods (mm3 individual − 1 day − 1) was a function of the volume concentration of all possible prey and the body size of the copepod relative to the cell size of the prey group. The equations depicting copepod growth rate were as follows: where gmax1 is the maximum grazing rate for copepods (mm3 individual − 1 day − 1), u k is the concentration of a specific prey expressed in units of cellular volume, mm3 l − 1 (where k= 1–4 represented the phytoplankton intermediate group, Pspecialist, N-specialist, and ciliate group, respectively), uthk is the grazing threshold of a prey group (mm3 l − 1) as suggested by (Nielsen, 1994), uTot is the sum of all possible prey (mm3 l − 1), kG 1 is the grazing half saturation constant for copepods (mm3 l − 1), SZ :SP is a value dependent on the ratio between the cell size of the copepod group and specific prey group (discussed more below), and all other symbols were the same as defined previously. A grazing preferencing scheme based on food quality has been linked to this Monod relationship (Fasham et al., 1990). In this model, however, food quality (in this case amount of N and P in a prey cell) is accounted for with the zooplankton ingestion equations. As with the N- and P-ingestion equations, the prey volume-based growth rate equations (mm3 individual − 1 day − 1) for ciliates and flagellates were more simplistic because each had only one source of prey. The equation for ciliates and flagellates were: g2 = gmax2 G3QfixV,G 3 − uth,G 3 (SZ :SP ) kG 2 + G3QfixV,G 3 (35) g3 = gmax3 D.L. Roelke / Ecological Modelling 134 (2000) 245–274 BQfixV,B − uth,B (SZ :SP ) kG 3 + BQfixV,B (36) respectively, where gmax2 and gmax3 are the maximum grazing rate for the ciliate and microzooplankton groups, respectively (mm3 −1 −1 individual day ), uth,G 3 and uth,B were the grazing thresholds for the microzooplankton and bacteria groups, respectively (mm3 l − 1), kG 2 and kG 3 were the grazing half saturation constant for the ciliate and microzooplankton groups, respectively (mm3 l − 1), and all other symbols were the same as defined previously. Zooplankton have been shown to have an optimal size ratio between grazer and prey were grazing rates are maximized. In addition, there exists a minimum size ratio below which grazing is no longer possible, and a maximum size ratio above which grazing is no longer possible. These values are based on morphological characteristics of the zooplankton, such as setae distribution and gape size, and therefore vary between zooplankton species (Sterner, 1989; Hansen et al., 1994). To represent this process in the model additional functions specific to each zooplankton group were required, SZ :SP, which further constrained the zooplankton group grazing rates. The relationships were based on a sine function, i.e. had a value between 0 and 1, and fit to data presented elsewhere (Hansen et al., 1994). To determine the actual growth rate for a specific zooplankton group, Liebig’s Law of the Minimum was applied to SZ :SP and the Monod relationship that described the influence of relative prey availability. 253 4.11. Zooplankton mortality Mortality to the copepod and ciliate groups (individuals l − 1 day − 1) was represented using the same type of equation used previously (Nielsen, 1994; Norberg and DeAngelis, 1997). The equation was: MortalityGj = mGjGj (38) where mGj is a group specific mortality rate (day − 1). This term was intended to represent losses to higher trophic levels through feeding processes. Because microflagellates are too small for ingestion by most organisms representative of higher trophic levels, no mortality term was applied. Regarding copepods, because of the diel vertical migration behavior simulated in the model, mortality losses to higher trophic levels only occurred at night. 4.12. Grazing losses to zooplankton by other zooplankton The loss to the ciliate group through copepod grazing, and the loss to the microflagellate group though ciliate grazing (individuals l − 1 day − 1) were a function of the predator grazing rate and concentration, and were expressed with: GrazingG 2 = g1G1 QfixV,G 2 (39) GrazingG 3 = g2G2 QfixV,G 3 (40) For the same reasons given for the bacterial respiration equations, losses from each zooplankton group due to respiration (individuals l − 1 day − 1) were also dependent on growth and biomass following: respectively, where all symbols were the same as previously defined. Because zooplankton cohorts (or different life stages) were not simulated in this model, and adult copepods are not known to feed on other adults, no grazing losses to the copepod group by other zooplankton was incorporated in the model. RespirationGj = r 1GjGrowthGj +r 2GjGj 4.13. Remineralization of N and P by bacteria 4.10. Zooplankton respiration 1 Gj (37) where r is the growth dependent respiration for each zooplankton group (unitless), r 2Gj is the biomass dependent respiration for each zooplankton group (day − 1), and all other symbols were the same as defined previously. For the purposes of this model the N and P content of the bacteria were constant. In order to maintain these fixed cellular pools, the loss of N and P from the bacteria group had to be propor- D.L. Roelke / Ecological Modelling 134 (2000) 245–274 254 tional to the cell loss. Regarding respiration losses from the bacteria group (cells l − 1 day − 1), proportional losses of N and P were necessary and were referred to as N- and P-remineralization (mmol N l − 1 day − 1, mmol P l − 1 day − 1). The equations for N- and P-remineralization were determined using: product from an organism representative of a higher trophic level. Therefore, the N lost from zooplankton due to mortality was placed in the N pool rather than the DON pool. RemineralizationBN =Qfix,BNRespirationB (41) RemineralizationBP =Qfix,BPRespirationB (42) The equation describing uptake of N (mmol N l − 1 day − 1) by phytoplankton and bacteria was a function of the total N sources available coupled to bacterial growth, and the uptake rate and concentration of the phytoplankton groups, and was described with: N UptakefN,BN = GrowthBQfix,BN N+DON respectively, where all symbols were the same as defined previously. 4.14. Excretion of N and P by zooplankton The N and P content of the varied zooplankton groups were also constant. In order to maintain these fixed cellular pools the N and P losses had to be proportional to the cell losses. To balance respiration losses (individuals l − 1 day − 1), N and P excretion terms (mmol N l − 1 day − 1, mmol P l − 1 day − 1) were introduced, using: 3 ExcretionG totalN = % RespirationGiQfix,GiN 3 + % fi UptakefiN (47) i=1 where all symbols were the same as defined previously. 4.17. Recycling of P and Si, and production of DON by copepod sloppy feeding (43) j=1 3 ExcretionG totalP = % RespirationGjQfix,GjP 4.16. Uptake of N by phytoplankton and bacteria (44) j=1 respectively, where all symbols were the same as defined previously. The equations describing recycling of P and production of DON (mmol P l − 1 mmol Si l − 1 day − 1, mmol DON l − 1 through the process of copepod sloppy were: and Si, day − 1, day − 1) feeding SloppyG 1P = xIngestionG 1P (48) 4.15. Production of N and P due to zooplankton mortality SloppyG 1Si = xIngestionG 1Si (49) SloppyG 1DON = xIngestionG 1DON (50) Similarly, losses due to zooplankton mortality (individuals l − 1 day − 1) were balanced with proportional losses of N and P (mmol N l − 1 day − 1, mmol P l − 1 day − 1). For N and P this was achieved using: respectively, where all symbols were the same as defined previously. Because the N produced was through mastication of prey biomass (sloppy feeding), the liberated N was placed into the DON pool rather than the N pool. 3 MortalityG totalN = % MortalityGiQfix,GiN (45) j=1 4.18. Recycling of P and Si, and production of DON by zooplankton egestion 3 MortalityG totalP = % MortalityGjQfix,GjP (46) j=1 respectively, where all symbols were the same as defined previously. Because zooplankton mortality was a function of feeding by higher trophic levels, the N was considered to be an excretion Because the N and P content of the zooplankton groups were constants, equations describing removal of excess non-limiting nutrients, referred to as egestion, were necessary. For example, egestion of N occurred only when a zooplankton group was P-limited, and egestion of P occurred D.L. Roelke / Ecological Modelling 134 (2000) 245–274 only when a zooplankton group was N-limited. All Si ingested was egested. The equations describing egestion of P, Si, and N (mmol P l − 1 day − 1, mmol Si l − 1 day − 1, mmol DON l − 1 day − 1) were: 3 EgestionG totalP = % IngestionGjP j=1 −IngestionGjN Qfix,GjP Qfix,GjN EgestionG 1Si =IngestionG 1Si(1 − x) (51) 3 j=1 −IngestionGjP Qfix,GjN Qfix,GjP Losses of N, P and Si from the phytoplankton groups relating to respiration (cells l − 1) were made a function of the N, P, and Si content at the time of respiration, referred to now as exudation. For exudation of P, Si, and N (mmol P l − 1 day − 1, mmol Si l − 1 day − 1, mmol DON l − 1 day − 1) the equations were: Exudationf totalP = % RespirationfiQfiP (57) Exudationf 1Si = Respirationf 1Qfix,f 1Si (58) i=1 3 Exudationf totalDON = % RespirationfiQfiN (59) i=1 (53) respectively, where all symbols were the same as defined previously. Because ingested N was previously a component of the prey biomass, egested N was placed into the DON pool rather than the N pool. 4.19. Recycling of P and Si, and production of DON through phytoplankton mortality Losses of N, P and Si from the phytoplankton groups relating to mortality (cells l − 1) were made a function of the N, P, and Si content at the time of mortality. For mortality based P, Si, and N production (mmol P l − 1 day − 1, mmol Si l − 1 day − 1, mmol DON l − 1 day − 1) the equations were: 3 Mortalityf totalP = % MortalityfiQfiP (54) Mortalityf 1Si =Mortalityf 1Qfix,f 1Si (55) i=1 3 Mortalityf totalDON = % MortalityfiQfiN 4.20. Recycling of P and Si, and production of DON through phytoplankton exudation 3 (52 c ) EgestionG totalDON = % IngestionGjN 255 (56) i=1 respectively, where all symbols were the same as defined previously. Because the N produced though phytoplankton mortality was previously incorporated in phytoplankton biomass, it was placed into the DON pool rather than the N pool. respectively, where all symbols were the same as defined previously. Again, because the N produced though phytoplankton exudation is from phytoplankton biomass, it was placed into the DON pool rather than the N pool. 4.21. Uptake of P by phytoplankton and bacteria The equation describing uptake of P (mmol P l − 1 day − 1) by phytoplankton and bacteria was a function of the bacterial growth and the uptake rate and concentration of the phytoplankton groups, and was described with: 3 UptakefP,BP = GrowthBQfix,BP + % fi Uptakefi i=1 (60) where all symbols were the same as defined previously. 4.22. Uptake of Si by phytoplankton (intermediate group only) The equation describing uptake of Si (mmol Si l − 1 day − 1) by the intermediate group was a function of the growth of the intermediate group, and was expressed with: Uptakef 1Si = Growthf 1Qfix,f 1Si (61) where all symbols were the same as defined previously. 256 D.L. Roelke / Ecological Modelling 134 (2000) 245–274 4.23. Uptake of DON by Bacteria The equation describing uptake of DON (mmol DON l − 1 day − 1) by bacteria was made a function of the total N sources available and the bacterial growth, and was described using: UptakeBDON =GrowthBQfix,BN DON N + DON (62) where all symbols were the same as defined previously. 4.24. Ad6ection inputs and losses As in a previous study (Nielsen, 1994) advection inputs and losses for each pool represented in the model (N, P, Si, DON, fi, Gj, and B) were a function of the specific flow rate (inflow divided by ecosystem volume), the concentration of a specific constituent in the input source, and the concentration of a specific constituent in the simulation, and was depicted using: Advection=nCsource −nCx (63) where n is the specific flow rate (day − 1), Csource is the concentration of a specific constituent in the input source (mmol l − 1), and Cx is the concentration of a specific constituent in the simulation. 5. Model validation and evaluation 5.1. Explanation of tests To reiterate a point stated previously, the intent of this paper was to generate a tool to be used to elucidate potential algal bloom mechanisms and determine sensitivity of such mechanisms to various abiotic and biotic processes. It was not the intent of this research to produce a predictive model. Nevertheless validation and evaluation of the model is necessary. The behavior of the model was tested in two ways. First, the ability of the model to predict accumulation of phytoplankton, bacteria, and microflagellate biomass was tested by comparing simulation results with data from the sewage-impacted NRE at a time when the initial conditions prior to a major disturbance could be estimated, and the nature of the disturbance and the period of phytoplankton growth after the disturbance were well understood. Unfortunately, the data did not contain information regarding copepod and ciliate distributions. In a previous study the equations of the model depicting phytoplankton dynamics, i.e. phytoplankton growth rate, accumulation of biomass, nutrient uptake rate, and cellular storage of N and P were validated (Roelke et al., 1999). The second test related to the behavior of the model where interactions between the various pools were the focus. It was not the intent of the second test to simulate a seasonal shift that would occur in a natural environment. To do this, processes such as temperature variation, water column stability, and depth of mixing would need to be incorporated, which was not the case or purpose here. 5.2. Model 6alidation test and results (in addition to Roelke et al., 1999) For the first test, the model was compared to data reported from NRE for August 1994 (Roelke, 1997; Roelke et al., 1997). The NRE had experienced a prolonged period of no flow from the Nueces River but continual input from a sewage treatment plant, which was followed by a large pulse that resulted in an 4-day hydraulic residence time for NRE. Using data from a station adjacent to the Nueces River input to initialize the model, and using knowledge of the Nueces River flow and nutrient concentration, as well as knowledge of the nutrient loading from the sewage treatment plant, a 4-day simulation was conducted. The values used to initialize the model are reported in Appendix A. Regarding the nutrient loading from the sewage treatment plant, historical records showed the nutrient concentrations for N and P were highly variable over periods as short as days, while the volume of discharge was remarkably consistent (Roelke, 1997). Therefore, for this model test the N and P concentration of the sewage treatment plant discharge was adjusted, within the range of reported values, to fit the measured concentration of N and P in NRE (Roelke et al., 1997) given the known hydrology. D.L. Roelke / Ecological Modelling 134 (2000) 245–274 257 Fig. 2. Comparison of the first simulation test to field data collected in the Nueces River estuary. For the field data, the initial conditions prior to a major disturbance were estimated, and the nature of the disturbance and the period of phytoplankton growth after the disturbance were well understood. These were used to initialize the model simulation. Data were not available for copepod and ciliate abundance comparisons. After a 20% increase in the bacterial half-saturation coefficients for N and P uptake, and a 4-fold increase in the derived half-saturation coefficient for ciliate grazing on microflagellates (see Appendix A), the model simulation results were very similar to measured values for the August NRE data (Fig. 2). An 30% overestimation of phytoplankton accumulated biomass was not surprising because the parameters depicting the phytoplankton groups were not ‘tweaked’ to optimize the model’s performance. Rather the phytoplankton groups built into the model were based on species for which there was available information on nutrient uptake and growth kinetics, which were not the same species present in NRE during August 1994. In addition, parameterization of these phytoplankton groups were identical to a previous study (Roelke et al., 1999), which allowed a direct comparison between studies (highlighted later). 5.3. Model beha6ior test and results For the second simulation test the initial conditions and nutrient loading were the same as the previous test, only the model simulation was for a longer period. Again, the purpose for the second test was to evaluate the behavior of the model where interactions between the various pools were the focus, not to predict seasonal cycles. Results from this test showed the Lotka– Volterra type behavior of the model. In this simulation phytoplankton accumulated biomass was grazed away, followed by a peak in copepod concentration and subsequent crash after all prey sources were exhausted, and a repeat of the cycle (Fig. 3a–c). The microbial loop showed consecutive population peaks in bacteria, flagellates, and ciliates, with the demise of each population mostly due to grazing pressure (Fig. 3c–e). Phytoplankton growth and accumulation of biomass were predominately controlled through copepod grazing, and nutrients were non-limiting (Fig. 3f, g, i, j). This explains why competitive exclusion among the phytoplankton groups was not evident, even though the N:P loading ratio favored the N-specialist (Fig. 3h). Results from this simulation test were reasonable with reported values from NRE, where accumulated algal biomass ranged from 0.01 to 1.4× 108 mm3 l − 1, bacteria concentrations from 0.3 to 7.3× 109 cells l − 1, flagellates from 0 to 0.2×108 cells l − 1, N concentrations from 0 to 35 mM, and P concentrations 0.5 to 14 mM (Roelke et al., 1997). 258 D.L. Roelke / Ecological Modelling 134 (2000) 245–274 6. Model use 6.1. Rationale behind simulations used to in6estigate plankton succession Model simulations were conducted with the intent to explore synergistic processes effecting phytoplankton succession, accumulation of algal biomass, and secondary productivity, and then to determine the sensitivity of these processes to various abiotic conditions. Because the emphasis of this research was on multiple limiting nutrients, simulations were conducted where nutrients actually became limiting. To achieve this, the nutrient Fig. 3. The second simulation test showed the Lotka–Volterra type behavior of the model when nutrient loading conditions were high. The phytoplankton groups were controlled through copepod grazing activity and no competitive exclusion processes were apparent despite the very low N:P of the nutrient loading. D.L. Roelke / Ecological Modelling 134 (2000) 245–274 loading and volume inputs were decreased from the values used for the validation and evaluation tests described above (this was done by removing the influence of the sewage treatment plant from the model runs). To better investigate how the mentioned processes influenced phytoplankton succession, the phosphorus loading was adjusted to produce nutrient loading ratios of either 10.5 or 20.5. In a previous study it was shown that these ratios corresponded to the optimal nutrient ratios for the N- and P-specialist, respectively, and that when nutrients were loaded at either optimal ratio these algae were able to out-perform their competitors as conditions approached steady state (Roelke et al., 1999). Because the simulations described below have no resemblance to conditions in the NRE, results should not be extrapolated to existing data for this ecosystem. Again, I reiterate that the intent of the simulations was to elucidate potential algal bloom mechanisms and determine sensitivity of such mechanisms to various abiotic and biotic processes, not to predict succession events in NRE. 6.2. Details of four simulations with 6aried abiotic conditions The first simulation received an N input where the concentration of the source water was 0.7 mM, which was the August value for the NRE data (Roelke et al., 1997). The phosphorus concentration was adjusted to produce an N:P loading of 10.5. All other initial conditions for this simulation are listed in Table 3. The model run was for a 120-day period and the loading was continuous. This simulation was used as the standard case, and is referred to as the bloom scenario for reasons that will become obvious. The second simulation differed from the first only in that the N and P concentrations in the source water were slightly increased, i.e. N changed from 0.7 to 1.0 mM N and P changed from 0.067 to 0.095 mM P. Because this was the only difference, this simulation was referred to as the magnitude change scenario. The third simulation differed only from the first in that the mode in which the nutrients were delivered was changed. For this simulation the 259 river flow was pulsed once every three days, the other two days no flow occurred. On days of a pulse the flow was three times greater than the bloom scenario, while the N and P concentrations were the same. Because this was the only difference, this simulation was referred to as the mode change scenario. The final simulation differed only from the first in that the P concentration in the source water was approximately halved. Previous simulations showed that the N-content of the phytoplankton was controlling copepod growth. Because of this, N-loading was held constant and the concentration of P was adjusted. This resulted in a shift away from the optimal ratio of the N-specialist (10.5) towards the P-specialist (20.5), while copepod growth remained N-limited. Because this was the only difference, this simulation was referred to as the ratio change scenario. 6.3. Comparison between simulations results Surprisingly, during the first simulation a bloom of the N-specialist resulted and secondary productivity ceased (Fig. 4a). Recall that no direct bloom-forming mechanisms, e.g. grazing inhibition, were ‘forced’ in the model simulations. To elucidate the underlying mechanism causing this bloom, comparisons were made with the second simulation, the magnitude change scenario, were loading of nutrients were slightly greater (Fig. 4b). The timing of the onset of bottom–up control (nutrient limitation) in relation to the timing of the onset of top–down control (grazing) of phytoplankton dictated whether a bloom of the N-specialist would occur. During the magnitude change scenario all three phytoplankton species grew more quickly than during the bloom scenario, because both N and P were added at greater concentrations. Early in this simulation, however, more rapid phytoplankton growth did not translate to more accumulated phytoplankton biomass. In fact, up to day 30 accumulated phytoplankton biomass was very similar between the bloom and magnitude change scenarios. This was due to the increased grazing pressure and accumulation of copepod biomass during the magnitude change scenario (Fig. 4a, b). Copepods accumulated 260 D.L. Roelke / Ecological Modelling 134 (2000) 245–274 Fig. 4. The model behavior when nutrient loading was reduced to a level where nutrients could become limiting. The bloom case scenario (A) resulted in exclusion of two phytoplankton groups and cessation of secondary productivity. The other three scenarios represented varied abiotic conditions of the model that were different from the bloom case scenario. Variations were a magnitude change (B) in nutrients loaded, i.e. increased N and P, a change in the mode of loading from continuous to pulsed (C), and a change in the ratio of nutrients loaded, i.e. decreased P (D). All changes resulted in increased phytoplankton species diversity, enhanced secondary productivity, and prevention of the algal bloom. D.L. Roelke / Ecological Modelling 134 (2000) 245–274 biomass during the bloom scenario as well, but at a slower rate (Fig. 4a). Because of this, the bulk of the copepod grazing activity during this simulation coincided with the period when the phytoplankton were in a ‘starved’ condition, i.e. the cell-quota for N and P was near the value of the critical cell-quota (Fig. 4a). As noted previously, grazers were depicted as selective feeders based on individual prey concentration, prey availability relative to all potential prey, and the size of the prey relative to the predator. Grazing rate was not a function of the ‘quality’ of the prey. The critical cell-quota regarding N for P. minimum, on which the N-specialist was based, is very low (see Appendix A). Under the conditions of the bloom scenario, the N-content of the N-specialist in a ‘starved’ condition was too low to support enough copepod growth to offset total copepod losses, which included respiration processes, mortality, and advection. This was not true for the intermediate group and P-specialist. Therefore, after the intermediate group and P-specialist were out-competed and depleted through advection and grazing losses, the copepods simply were flushed out of the system. In the absence of a predator the N-specialist bloomed. The third simulation, the mode change scenario, also prevented a bloom of the N-specialist. For this scenario two controlling processes were elucidated that prevented the algal bloom. The first process related to the ability of the phytoplankton groups to uptake and store nutrients at a rate greater than their reproductive growth rate. This resulted in brief periods, which coincided with the nutrient pulses, were the N and P cellquotas for the phytoplankton groups were elevated (Roelke et al., 1999). This prevented the N-specialist from remaining in a starved state, i.e. below the copepod food-quality threshold. The second process that prevented the algal bloom was the diel migratory nature of the copepod group, i.e. copepods were present at the surface and subject to advection losses only during the night. During the day copepods did not feed at the surface and were not subject to advection losses. The mode change scenario was set up to deliver a pulse according to a sine function. 261 This meant that the minimum hydraulic residence time, or the time of maximum advection losses, was at 12:00 noon when the copepods were not in surface waters. A combination of the brief periods of enhanced N cell-quota under pulsed conditions and the simulated diel vertical migration of the copepod group lead to greater growth and accumulation of copepod biomass. Again, the controlling mechanism that determined whether a bloom would occur was the timing of the onset of bottom–up and top–down control of the phytoplankton. During the mode change scenario grazing depleted the phytoplankton before the N-specialist reached a ‘starved’ condition, i.e. all phytoplankton contained an amount of intracellular-N great enough to support copepod growth and offset total copepod losses (Fig. 4c). The ratio change scenario, as with the magnitude and mode change scenarios, also prevented the bloom of the N-specialist. For this scenario, the underlying process that prevented the algal bloom was the ability of phytoplankton species to sequester non-limiting nutrients that would eventually limit growth of competing algae. As was the case for all three comparative simulations, the N-specialist was P-limited early in the simulation, whereas the other two algae were N-limited (Fig. 4a–d). Reducing the amount of P-loading caused the N-specialist to grow slower (Fig. 4d). This resulted in the N-specialist sequestering less N, i.e. making more N available for growth of the other phytoplankton groups. As stated previously, the intermediate group and P-specialist were suitable food sources for the copepods regardless of their nutritional status. The net result of the ratio change (less P) was greater growth and accumulation of copepod biomass (Fig. 4d). As before, the controlling mechanism was that the onset of topdown control occurred before the N-specialist reached a starved condition, which in turn prevented an algal bloom. 7. Discussion Critical to the findings of this study is the existence of a food-quality threshold below which 262 D.L. Roelke / Ecological Modelling 134 (2000) 245–274 a predator can no longer survive, regardless of the prey density. Do such thresholds exist for predators in natural environments? There is a vast body of literature demonstrating that foodquality in terms of N- and P-content directly impact population dynamics of grazers, i.e. predator growth, reproductive success, and accumulation of biomass are positively correlated to the N- or P-content of the prey. This was suggested as a controlling process in some natural environments (Gleitz et al., 1996; Savage and Knott, 1998) and mesocosm studies (Prins et al., 1995), and shown to occur in laboratory experiments (Sommer, 1992; Sterner et al., 1993; Lurling and Donk, 1997). These studies did not show that feeding on prey of poor food-quality resulted in the demise of a predator population, i.e. not just poorer performance but elimination, which is what the results of this study, and another modeling study (Hessen and Bjerkeng, 1997), suggest. This concept deviates from classical predator-prey theory, and has yet to be demonstrated in a natural environment. Some laboratory experiments, on the other hand, support this concept. For example, in one study it was shown that a single predator failed to grow when offered only one prey source of poor food-quality (Sommer, 1992). In another experiment, a natural phytoplankton assemblage bloomed and secondary grazers died off under conditions of continuous loading, i.e. approaching steady state, while under conditions of pulsed nutrient supply the same phytoplankton assemblage remained cropped and secondary consumer populations grew and were sustained (Roelke and Buyukates, 1999). In theory, the existence of food-quality thresholds for predators in natural environments seems logical. Its role as a process influencing plankton succession, however, may vary with plankton species diversity and the dynamic nature of the aquatic environment. For example, when many prey selections are available there is a chance that one of the coexisting species will not be below the food-quality threshold, even when starved. In this case, the excess nutrient content from this one species may result in a prey community whose total nutrient content is above the food-quality threshold, even though other members of the community may be below the threshold. Similarly, communities that are characteristic of many grazers are likely to have members with varying food-quality thresholds. As long as the food-quality threshold remains above the threshold of the grazer with the least nutrient requirement, grazing will continue and ambient nutrients will be made available. In turn, this may replenish the nutrient content of the starved prey (Prins et al., 1998, but see Elser and Urabe, 1999) and allow all grazers to persist. Finally, predator food-quality thresholds are not constants. Because they are a function of the nutrient content of the prey relative to loss mechanisms, such as respiration, mortality, and advection, they will vary with each of these processes. For example, model simulations not reported here showed that the copepods were able to thrive under conditions of no flow while feeding on starved algal cells that under conditions of flow were unacceptable. This argument highlights the importance of both species diversity and fluctuating environments. Processes that reduce diversity, such as introduction of pollutants or exotic species, or reduce the dynamic nature of an ecosystem, such as water diversion projects and construction of reservoirs, may ultimately increase the vulnerability of an ecosystem to algal blooms where poor food-quality is the bloom-initiating process. The influence of food-quality thresholds on plankton succession is likely to be coupled to other important processes (see Sommer, 1989a,b; Anderson and Garrison, 1997). In the present study, however, the predator food-quality threshold was the most important feature of the model. These findings may have implications regarding the way we manage point source nutrient inputs to aquatic environments. For example, the timing of the onset of bottom–up and top–down control of phytoplankton, the underlying mechanism controlling whether a bloom would ensue, was sensitive to abiotic conditions that are possible to manipulate, i.e. magnitude, mode, and ratio of nutrient loading. To further test the concepts presented here in a management context, in-field and mesocosm ex- D.L. Roelke / Ecological Modelling 134 (2000) 245–274 periments are necessary to better explore synergistic interactions between predator food-quality thresholds and other processes that impact plankton community dynamics. 263 nutrient loading it was possible to maintain phytoplankton species diversity, enhance secondary productivity, and prevent an algal bloom. Acknowledgements 8. Summary The model simulations illustrated the potential importance of food-quality thresholds for predators as they influence phytoplankton succession, accumulation of algal biomass, and secondary productivity. In the extreme, these findings indicate that secondary productivity can collapse and a bloom result when phytoplankton are of poor food-quality, regardless of their concentration. This finding deviates from classic predator – prey models. The mechanism controlling whether an algal bloom would occur was the timing of the onset of bottom – up control relative to the onset of top – down control. When top down control occurred prior to bottom–up control, prey were of acceptable quality, copepod growth and accumulation of biomass followed, and classical Lotka – Volterra behavior ensued. On the other hand, when bottom – up control occurred before top – down control, some prey were of poor quality, secondary productivity ceased, and an algal bloom occurred. The timing of the onset of bottom – up and top – down control was highly sensitive to some abiotic conditions. By manipulating the magnitude, mode, and ratio of The author is grateful to reviewers for their insightful comments on a previous version of this manuscript. A portion of this research was performed while the author held a CORE/NRL Postdoctoral Fellowship. Appendix A The appendix is divided into two sections. The first section lists the constant parameters of the model with reference to citations from which the information was obtained. The section lists the variable parameters of the model as well as the input sources, initial values of the appropiate parameters are listed as well. Throughout the appendix the letters i and j are used in subscript notation. The letter i refers to the phytoplankton groups. It has a value between 1 and 3, where 1= intermediate group, 2= P-specialist, and 3= N-specialist. The letter j refers to the zooplankton groups and also has a value between 1 and 3, where 1= copepod group, 2= ciliate group, and 3= microflagellate group. A.1. Model constants Symbol Description Units i, j= 1 i, j= 2 i, j= 3 Reference and/or notes afiN Phytoplankton group P-uptake factor when N-limited – 0.01 0.01 0.01 Roelke et al., 1999 D.L. Roelke / Ecological Modelling 134 (2000) 245–274 264 Bacteria cell size, equivalent spherical diameter Zooplankton cell size, equivalent spherical diameter mm 0.80 mm 200 30 3 Phytoplankton cell size, equivalent spherical diameter Bacterial half saturation coefficient for Nand DONdependent growth Bacterial half saturation coefficient for P-dependent growth mm 12.4 8.14 10.2 mmol N/DON l−1 0.78 mmol P l−1 0.078 kGj Zooplank ton group half saturation coefficient for grazing rate mm3 l−1 1.12×109 2.11×109 3.18×109 kfiN Phytoplankton group half saturation coefficient for N uptake Phytoplankton group half saturation coefficient for P uptake mmol N l−1 0.820 1.00 0.300 mmol P l−1 0.065 0.100 1.00 ESDB ESDGj ESDfi kBN kBP kfiP Roelke, 1997; Roelke et al., 1997 Selected within reported values from Hansen et al., 1994; Dagg, 1995; Roelke, 1997 Bold and Wynne, 1985; Tomas, 1996 Adjusted up from Fuhrman et al., 1988; Gude, 1989; Suttle et al., 1990 Adjusted up from Fuhrman et al., 1988; Gude, 1989; Suttle et al., 1990 Derived and adjusted from Redfield et al., 1963; Evans and Parslow, 1985; Fasham et al., 1990 Roelke et al., 1999 Roelke et al., 1999 D.L. Roelke / Ecological Modelling 134 (2000) 245–274 kf 1Si mGj mfi Qfix,BN Qfix,BP Intermediate group half saturation coefficient for Si-dependent growth Zooplankton group specific mortality rate Phytoplankton group specific mortality rate Bacteria cellular composition of N 265 mmol Si l−1 3.0 – – Derived from Dortch and Whitedge, 1992; Dortch et al., 1994 day−1 0.10 0.10 – day−1 0.09 0.09 0.09 Assumed as a feeding loss from higher trophic level Fasham et al., 1990 mmol N cell−1 2.79×10−9 Bacteria mmol P cell−1 cellular composition of P 0.260×10−9 Qfix,GjN Zooplankmmol N individual−1 4.40×10−3 ton group cellular composition of N 2.50×10−5 2.67×10−8 Derived from Fuhrman, 1992; Lee and Fuhrman, 1987; Roelke, 1997; Roelke et al., 1997 Derived from Fuhrman, 1992; Lee and Fuhrman, 1987; Roelke, 1997; Roelke et al., 1997 Derived using Redfield et al., 1963; Bernard and Rassoulzadegan, 1993; Hansen et al., 1994; Sterner and Hessen, 1994; Dagg, 1995; Simek et al., 1995 D.L. Roelke / Ecological Modelling 134 (2000) 245–274 266 Qfix,GjP Zooplankmmol P individual−1 0.147×10−3 0.156×10−5 0.167×10−8 ton group cellular composition of P QfixV,B Bacteria cellular volume Zooplankton group cellular volume mm3 cell−1 0.268 mm3 cell−1 4.19×106 1.41×104 14.1 Phytoplankton group cellular volume Phytoplankton intermediate group cellular composition of Si Phytoplankton group maximum N cell-quota Phytoplankton group maximum P cell-quota Phytoplankton group minimum N cell-quota Phytoplankton group minimum P cell-quota mm3 cell−1 998 282 556 mmol Si cell−1 767×10−9 – – mmol-N cell−1 767×10−9 180×10−9 119×10−9 mmol P cell−1 89.0×10−9 17.0×10−9 23.2×10−9 Roelke et al., 1999 mmol N cell−1 110×10−9 mmol P cell−1 6.85×10−9 1.43×10−9 1.95×10−9 Roelke et al., 1999 QfixV,Gj QfixV,fi Qfix,f 1Si Qmax,fiN Qmax,fiP Qmin,fiN Qmin,fiP Derived using Redfield et al., 1963; Bernard and Rassoulzadegan, 1993; Hansen et al., 1994; Sterner and Hessen, 1994; Dagg, 1995; Simek et al., 1995 Roelke, 1997; Roelke et al., 1997 Selected within reported values from Hansen et al., 1994; Dagg, 1995; Roelke, 1997 Bold and Wynne, 1985; Tomas, 1996 Derived from Brzezinski, 1985; Levasseur and Therriault, 1987 Roelke et al., 1999 30.8×10−9 20.4×10−9 Roelke et al., 1999 D.L. Roelke / Ecological Modelling 134 (2000) 245–274 r 1B r 2B r 1Gj r 2Gj rfi SZ1:SP SZ :SP Vmax,fi Bacteria growthdependent respiration factor Bacteria biomassdependent respiration factor Zooplankton group growthdependent respiration factor Zooplankton group biomassdependent respiration factor Phytoplankton group respiration factor Copepod optimal pred:prey function for phytoplankton groups Pred:prey function for Copepods: Ciliate, Ciliate: Flagellate, Flagellate: Bacteria Phytoplankton group maximum light-dependent specific growth rate 267 – 0.4 Derived from Riley et al., 1949; Jahnke and, Craven 1995 Derived from Riley et al., 1949; Jahnke and Craven, 1995 Derived from Riley et al., 1949; Checkley, 1980; Dagg et al., 1991 Derived from Riley et al., 1949; Checkley, 1980; Dagg et al., 1991 Geider, 1992 day−1 0.12 – 0.50 0.50 0.50 day−1 0.12 0.12 0.12 – 0.17 0.17 0.17 – 0.97 0.95 1.0 Derived from Sterner, 1989; Hansen et al., 1994 – 0.20 0.99 0.99 Derived from Sterner, 1989; Hansen et al., 1994 day−1 2.20 2.20 2.20 Parsons et al., 1984 D.L. Roelke / Ecological Modelling 134 (2000) 245–274 268 afi gmaxj mmax,B m̄max,fiN m̄max,fiP mmax,f 1Si rmax,fiN Phytoplank- cm2 s quanta−1 day−1 5.3×10−18 ton group slope of the photosynthesis–irradiance curve Zooplankmm3 individual−1 day−1 9.45×107 ton group maximum growth rate in terms of volume of prey Bacterial maximum specific growth rate Phytoplankton group N-limited maximum specific growth rate Phytoplankton group P-limited maximum specificgrowth rate Intermediate group Si-limited maximum specific growth rate Phytoplankton group N-uptake rate measured at m̃ 5.3×10−18 5.3×10−18 Parsons et al., 1984 2.98×104 14.3 Derived from Smayda, 1978; Verity, 1985; McManus and Fuhrman, 1988; Dagg et al., 1991; Hansen et al., 1994; Simek et al., 1995; Roelke, 1997; Roelke et al., 1997 Ducklow and Carlson, 1992 day−1 1 day−1 1.60 2.01 1.5 Roelke et al., 1999 day−1 1.60 1.92 1.50 Roelke et al., 1999 day−1 1.60 – – Assumed equal to m̄max,fiN mmol N cell−1 day−1 1140×10−9 300×10−9 750×10−9 Roelke et al., 1999 D.L. Roelke / Ecological Modelling 134 (2000) 245–274 rmax,fiP Phytoplank- mmol P cell−1 day−1 ton group P-uptake rate measured at m̃ uth Prey graz- mm3 l−1 ing threshold expressed in units of cellular volume x Copepod – sloppy feeding coefficient 269 71.6×10−9 27.0×10−9 71.4×10−9 Roelke et al., 1999 1.67×104 1.67×104 1.67×104 Selected as 1% of initial value 0.25 Derived from Fasham et al., 1990 A.2. Model 6ariables and input sources: initial parameter 6alues (where appropriate) Symbol Description Units Afi Light-dependant growth factor for phytoplankton groups Bacteria concentration General constituent concentration for the input source General constituent concentration in the box model Ambient labile dissolved organic nitrogen concentration Ambient labile dissolved organic nitrogen concentration in river source – B Csource Cx DON DONriver 4 day test Bloom Magnit case change Mode change Ratio change 1×109 s s s s mmol DON l−1 0 s s s s mmol DON l−1 0 s s s s cells l−1 mass l−1 mass l−1 D.L. Roelke / Ecological Modelling 134 (2000) 245–274 270 DONstp G1 G2 G3 I N Nriver Nstp P Priver Pstp Qf 1N Qf 2N Qf 3N Qf 1P Qf 2P Qf 3P Ambient labile dissolved organic nitrogen concentration in stp source Copepod concentration Ciliate concentration Microflagellate concentration Irradiance Ambient nitrogen concentration Ambient nitrogen concentration in river source Ambient nitrogen concentration in stp source Ambient phosphorus concentration Ambient phosphorus concentration in river source Ambient phosphorus concentration in stp source Intermediate group N cellquota P-specialist group N cell-quota N-specialist group N cellquota Intermediate group P cellquota P-specialist group P cell-quota N-specialist group P cellquota mmol DON l−1 0 individuals l−1 1 s s s s individuals l−1 1 s s s s individuals l−1 4.85×103 s s s s quanta cm−2 s−1 mmol N l−1 0.7 0.7 1.0 0.7 0.7 mmol N l−1 0.7 0.7 1.0 0.7 0.7 mmol N l−1 230 mmol P l−1 3.5 0.067 0.095 0.067 0.034 mmol P l−1 3.5 0.067 0.095 0.067 0.034 mmol P l−1 34 mmol N cell−1 219×10−9 s s s s mmol N cell−1 61.6×10−9 s s s s mmol N cell−1 40.9×10−9 s s s s mmol P cell−1 13.7×10−9 s s s s mmol P cell−1 2.86×10−9 s s s s mmol P cell−1 3.90×10−9 s s s s D.L. Roelke / Ecological Modelling 134 (2000) 245–274 Si Siriver Sistp Vfi gj mB mBN mBP mfi mfiN mfiP mf 1Si n f1 f2 Ambient Silica concentration Ambient Silica concentration in river source Ambient Silica concentration in stp source Light-dependent specific growth rate for the phytoplankton groups Growth rate in terms of volume of prey for zooplankton groups Bacteria specific growth rate Bacteria N-limited specific growth rate Bacteria P-limited specific growth rate Phytoplankton group specific growth rate Phytoplankton group N-limited specific growth rate Phytoplankton group P-limited specific growth rate Intermediate group Si-limited specific growth rate Specific flow rate Intermediate group cell concentration P-specialist group cell concentration 271 mmol Si l−1 10 s s s s mmol Si l−1 10 s s s s mmol Si l−1 10 d−1 mm3 individual−1 day−1 day−1 day−1 day−1 day−1 day−1 day−1 day−1 day−1 cells l−1 0.137 1.67×103 0.1 s 0.1 s 0–0.3 s 0.1 s cells l−1 5.91×103 s s s s 272 f3 u D.L. 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