Curriculum Vitae 1. Name Surname: Ajda Çoker Gürkan Contact information Address: Istanbul Kultur University, Faculty of Science and Literature, Department of Molecular Biology and Genetics, Atakoy Campus, 34156 Bakirkoy-Istanbul Phone: +90 212 498 4565 E-mail: [email protected] 2. Date of Birth: 1980 3. Title: Assoc. Prof. Dr. 4. Education: Degree Bachelor Field Science& Letters Faculty University Marmara University Year 2002 Marmara University 2005 Marmara University 2009 Biology Department Master Institute of Science Biology Department Doctorate Institute of Science Biology Department Page 1 of 15 5. Academic Titles Title Assist. Prof Department University Year/Period Molecular Biology Istanbul Kultur February 2014 Research Assistant Molecular Biologist Molecular Research Assistant and Genetics University November 2010 Biology Istanbul Kultur October 2008 and Genetics University August 2008 Biology Istanbul Kultur July 2008 and Genetics University February 2008 Engineering Faculty, Marmara January 2008 Molecular Biology University and Culture Cell October 2003 Laboratuary 6. Graduate Theses Supervised Zeynep Akyol, İstanbul Kultur University, Molecular Biology and Genetics Department 6.1 Master Theses “Koroner Arter Hastalığı ile IL-1 Reseptör Antagonist Gen Polimorfizminin Moleküler Düzeyde İncelenmesi” (Assist. Prof. Dr. Ahmet ARMAN, Marmara University, Faculty of Science) 6.2 Doctorate Theses “İnsan Büyüme Hormonunun (BH-N) klonlanıp, ekspresyonu ve İzole Büyüme Hormonu Eksiliği Sendromunun Genetik Karakterizasyonu” (Assoc. Prof. Dr. Ahmet ARMAN, Marmara University, Faculty of Science) 7. Publications 7.1 Articles published in peer reviewed international journals 1. E. D. Arisan, P. Obakan, A. Çoker-Gürkan, A. Calcabrini, E. Agostinelli, N. Palavan Ünsal, “CDK inhibitors induce mitochondria-mediated apoptosis through the activation of polyamine catabolic pathway in LNCaP, DU145 and PC3 prostate cancer cells”. Current Pharmaceutical Design, 20: 180-188 (9), 2014 (Research Article). Page 2 of 15 2. Ozfiliz P, Arisan ED, Coker A, Obakan P, Eralp T, Doganay-Dinler G, PalavanUnsal N, Bag-1L mediated chemoresistance mechanism through preventing downregulation of Mcl-1 and c-Raf by heat shock proteins in HeLa cells, Asian Pacific Journal of Cancer Prevention, 2014 (Accepted for publications, 2014) 3. Elif Damla Arisan, Yunus Akkoç*, Kaan Gencer Akyüz*, Ezgi Melek Kerman*, Pinar Obakan, Ajda Çoker-Gürkan, Narçin Palavan Ünsal, “Polyamines modulate roscovitine-induced cell death decision as autophagy or apoptosis in MCF-7 and MDA-MB-231 breast cancer cells”, Molecular Medicine Reports, (Accepted for publications, 2014). 4. Ajda Çoker-Gürkan, Elif Damla Arisan, Pinar Obakan, Pelin Özfiliz, Betsi Köse, Güven Bıçkıcı, Narçin Palavan Ünsal, “Roscovitine finalized autophagy later than apoptosis by downregulating of Bcl-2 in HeLa cells”, Molecular Medicine Reports, (Accepted for publications, 2014). 5. A. Çoker-Gürkan, S. Arısan, E.D. Arısan, N. Palavan Ünsal, “Lack of evidence for the association of ornithine decarboxylase (+316 G>A), spermidine/spermine acetyl transferase (-1415 T>C) gene polymorphisms with calcium oxalate stone disease, Biomedical Reports, 2013, DOI: 10.3892/br.2013.184 (Research Article). 6. P. Obakan, P. Ozfiliz, E.D. Arısan, A. Çoker-Gürkan, N. Palavan Ünsal, “Purvalanol A is a strong apoptotic inducer via activating polyamine catabolic pathway in MCF-7 estrogen receptor positive breast cancer cells”, Molecular Biology Reports, 2013, DOI: 10.1007/s11033-013-2847-1 (Research Article). 7. A.Çoker-Gurkan, E. D. Arisan, P. Obakan, N. Palavan-Ünsal, “Inhibition of polyamine oxidase prevented cyclin dependent kinase inhibitor-induced apoptosis in HCT116 colon carcinoma cells” Apoptosis, DOI: 10.1007/s10495-013-0885-8 (Research Article). 8. Çoker-Gurkan, S. Arisan, E. D. Arisan, N.C. Sönmez, N. Palavan-Ünsal, “Association between IL-1RN VNTR, IL-1 –511 and IL-6 (–174, –572, –597) Gene Polymorphisms and Urolithiasis” Urologia Internationalis, 2013 (Research Article). 9. A.Çoker, E.D. Arısan, Narcin Palavan-Unsal, "Silencing of polyamine catabolic key enzyme SSAT prevented CDK inhibitors induced apoptosis in Caco-2 colon cancer cells", Molecular Medicine Reports (ISI), 1037-1042 pp., 2012, DOI: 10.3892/mmr.2012.768 (Research Article). 10. E. D. Arısan, A.Coker, P.Obakan, N.Palavan-Unsal, "Inhibition of ornithine decarboxylase altered the roscovitine-induced mitochondria mediated apoptosis in MCF-7 breast cancer cells", Molecular Medicine Reports (ISI), 1323-1329 pp., 2012, DOI: 10.3892/mmr.2012.786 (Research Article). 11. E.D.Arisan, A.Coker, N.Palavan-Unsal, "Polyamine depletion enhances the roscovitine-induced apoptosis through the activation of mitochondria in HCT116 colon carcinoma cells", Amino Acids, 2011, DOI: 10.1007/s00726-011-1040-x (Research Article). Page 3 of 15 12. S.Akyuz, A.E.Ozel, K.Balci, T.Akyuz, A.Coker, E.D.Arisan, N.Palavan-Unsal, A.Ozalpan, "Raman micro-spectroscopic analysis of cultured HCT116 colon cancer cells in the presence of roscovitine", Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy A, 1540–1547 pp., 2011, DOI: 10.1016/j.saa.2011.01.046 (Research Article). 13. S.Akyuz, A.E.Ozel, K.Balci, T.Akyuz, A.Coker, E.D.Arisan, N.Palavan-Unsal, A.Ozalpan, "Raman micro-spectroscopic investigation of the interaction of cultured HCT116 colon cancer cells with alpha- difluoromethylornithine (DFMO), an irreversible inhibitor of ornithine decarboxylase." Journal of Molecular Structure 319-323 pp., 2011, DOI: 10.1016/j.molstruc.2011.01.04 (Research Article). 14. A. Coker, A. Arman, O. Soylu, T. Tezel, A. Yildirim, “Lack of association between IL-1 and IL-6 gene polymorphisms and myocardial infarction in Turkish population”, International Journal of Immunogenetics, 38 (3), 201-208, 2011. (Research Article). 15. A. Arman, A. Coker, O. Sarioz, N. Inanc, H. Direskeneli, “Lack of association between IL-6 gene polymorphisms and rheumatoid arthritis in Turkish population”, Rheumatol Int. Clinical and Experimental Investigation (DOI10.1007/s00296-0112057-x), 2011(Research Article). 16. A. Arman, N. Isik, A. Coker, F. Candan, K.S., Becit, E.O. List, “Association between sporadic Parkinson disease and interleukin-1 beta -511 gene polymorphisms in the Turkish population”,Eur Cytokine Netw., Jun;21(2):116-121,2010. (Research Article). 17. A. Arman, B. Yüksel, A. Coker, O. Sarioz, F. Temiz, A.K. Topaloglu, “Novel growth hormone receptor gene mutation in a patient with Laron syndrome”, J Pediatr Endocrinol Metab. Apr;23(4):407-414, 2010. (Research Article). 18. A. Coker, E. Cetinkaya, B. Dundar, Z. Siklar, A. Buyukgebiz, A. Arman. “Characterization of GH-1 mutations in children with isolated Growth Hormone Deficiency in Turkish Population”, Journal of Pediatric Endocrinology & Metabolism, Oct, 22 (10); 937-946, 2009. (Research Article). 19. A. Arman, A. Ozon, P.I. Isguven, A. Coker, I. Peker, N. Yordam, “Novel Splice Site Mutation in the Growth Hormone Receptor Gene in Turkish patients with Laron-type dwarfism”, Journal of Pediatric Endocrinology & Metabolism, Jan 21;47-58, 2008, (Research Article). 20. O. Soylu, A. Yildirim, A. Coker, T. Tezel, E.O. List, A. Arman, “Interleukin-1B (511) gene polymorphism is associated with acute coronary syndrome in the Turkish population”. Eur Cytokine Netw. Mar;19(1):42-48, 2008. (Research Article). 21. A. Arman, O. Soylu, A. Yildirim, A. Furman, N. Ercelen, H. Aydogan, A. Coker, T. Tezel, “Interleukin-1 receptor antagonist gene VNTR polymorphism is associated with coronary artery disease”.Arq Bras Cardiol. Nov;91(5):268-273, 2008 (Research Article). Page 4 of 15 22. A. Arman, B. Yılmaz, A. Coker, N. Inanc, H. Direskeneli, “Interleukin-1 Receptor Antagonist (IL-1RN) and Interleukin-1B gene polymorphisms in Turkish patients with Rheumatoid Arthritis”, Clin and Exp Rheumatol., Nov-Dec;24(6):643-648, 2006. (Research Article). 7.2 Papers delivered in international conferences and printed as proceedings 1- Ajda Çoker-Gürkan, Kübra Akalın, Utku Özbey, Elif Damla Arısan, Pınar Obakan, Narçin Palavan-Ünsal, “Induction of Endoplasmic Reticulum (ER) stress-mediated apoptosis and autophagy by Purvalanol in HCT 116 colon cancer cells” EACR Sponsored 2nd Anticancer Agents Congress& 5th Mutlidisciplinary Cancer Research Congress, PP13, Sayfa: 99, 23-27 April 2014, Bodrum, TURKEY, (Selected Poster-Oral Presentation). 2- P. Obakan, E.D. Arisan, A. Coker-Gurkan, N. Palavan-Unsal, “ER stress is involved in Epibrassinolide-induced apoptotic cell death” EACR Sponsored 2nd Anticancer Agents Congress& 5th Mutlidisciplinary Cancer Research Congress, PP61, Sayfa: 147, 23-27 April 2014, Bodrum, TURKEY (Selected Poster-Oral Presentation). 3- Deniz Coskun, Pınar Obakan, Elif Damla Arisan, Ajda Çoker Gürkan, Narcin PalavanUnsal, “Epibrassinolide-induced Apoptosis is Modulated by AKT-FOXO3a Signaling Pathway”, EACR Sponsored 2nd Anticancer Agents Congress& 5th Mutlidisciplinary Cancer Research Congress, PP24, Sayfa: 110, 23-27 April 2014, Bodrum, TURKEY (Selected Poster-Oral Presentation). 4- Özge Berrak, Elif Damla Arisan, Pinar Obakan, Ajda Çoker-Gürkan, Narcin PalavanUnsal, “The combination of rapamycin with purvalanol and roscovitine induces autophagy through PI3K/AKT and Ras/Raf/Erk pathways regulation in DU 145 prostate cancer cells” EACR Sponsored 2nd Anticancer Agents Congress& 5th Mutlidisciplinary Cancer Research Congress, PP57, Sayfa: 143, 23-27 April 2014, Bodrum, TURKEY (Selected Poster-Oral Presentation). 5- Pelin Özfiliz, Elif Damla Arısan, Pınar Obakan, Ajda Çoker-Gürkan, Gizem Dinler Doğanay , Narçin Palavan Ünsal, “Silencing of Bag-1 enhanced the cisplatin or paclitaxel-induced apoptosis via regulating PI3K, Akt and MAPK signaling axis in MCF7 breast cancer cells” EACR Sponsored 2nd Anticancer Agents Congress& 5th Mutlidisciplinary Cancer Research Congress, PP59, Sayfa: 145, 23-27 April 2014, Bodrum, TURKEY (Selected Poster-Oral Presentation). 6- H. Ilhan, A. Coker-Gurkan, E.D. Arisan, P. Obakan, N. Palavan Unsal. N. Diethylnorspermine (DENSpm) Induced Apoptosis in SW480 Colon Cancer Cells, First International Congress of the Molecular Biology Association of Turkey, 23-24 November 2012, Istanbul-TURKEY. (Poster Presentation: H. Ilhan) 7- Y. Akkoc, E.D. Arisan, A. Coker-Gurkan, P. Obakan, N. Palavan-Unsal. Understanding the Role of Bcl-2 in Curcumin induced Autophagic/Apoptotic Cell Death Mechanism in MCF-7 and MDA-MB-231 Breast Cancer Cells, First International Congress of the Molecular Biology Association of Turkey, 23-24 November 2012, Istanbul-TURKEY. (Poster Presentation: Y. Akkoc) 8- D. Coskun, P. Obakan, E.D. Arisan, A. Coker-Gurkan, N. Palavan-Unsal. Epibrassinolide Induced Apoptotic Cell Death in HCT116 and HT29 Colon Carcinoma cells, First Page 5 of 15 International Congress of the Molecular Biology Association of Turkey, 23-24 November 2012, Istanbul-TURKEY. (Poster Presentation: D. Coskun) 9- O. Berrak, Y. Akkoc, P. Obakan, E.D. Arisan, A. Coker-Gurkan, N. Palavan-Unsal. Effects of CDK Inhibitors and Rapamycin Combination on Autophagy With The Status of AR expression on Androgen Dependent LNCaP and Androgen Independent DU145 Prostate Cancer Cells, First International Congress of the Molecular Biology Association of Turkey, 23-24 November 2012, Istanbul-TURKEY. (Poster Presentation: O.Berrak) 10- A. Çoker Gürkan A , P. Obakan, Arısan ED, Calcabrini A, Agostinelli E, Palavan-Ünsal N, “The Effect of Polyamine Catabolism Products on CDK Inhibitors-Induced on HCT116 wt and Bax-/- Colon Carcinoma Apoptotic Cell Death”, International Congress on Polyamines Biological and Clinical Perspectives 2-7 September, Istanbul- TURKEY, P15, p.126, 2012 (Oral Presentation: Ajda Çoker-Gürkan) 11- A. Çoker Gürkan, E.D. Arısan, N. Palavan-Ünsal, “Which is the most prominent cellular decision against CDK inhibitors in the presence of modulated polyamine pool? Autophagy or Apoptosis”, International Congress on Polyamines Biological and Clinical Perspectives 2-7 September, Istanbul- TURKEY, P16, p.127, 2012 (Poster Presentation: E Damla Arisan) 12- B. Köse, G. Alkurt, A. Çoker Gürkan, E.D. Arısan, P. Obakan, N. Palavan-Ünsal N, “ODC is a Mediator of the Purvalanol-A-Induced Apoptotic Signaling via the p38 Mitogen-Activated Protein Kinase Pathway in MCF-7 Breast Cancer Cells”, International Congress on Polyamines Biological and Clinical Perspectives, 2-7 September, IstanbulTURKEY, P18, p.130, 2012 (Poster Presentation: B. Köse ve G. Alkurt). 13- D. Coşkun, P. Obakan, E.D. Arısan, A. Çoker Gürkan, N. Palavan-Ünsal, “The Potential Role of Polyamines in EBR-Induced Apoptotic Cell Death in HCT116 Colon Carcinoma Cells”, International Congress on Polyamines Biological and Clinical Perspectives, 2-7 September, Istanbul- TURKEY, P20, p.134, 2012 (Poster Presentation: D. Coşkun). 14- H. İlhan H, A. Çoker Gürkan, P. Obakan, E.D. Arısan, N. Palavan-Ünsal, “Timing is critical in the decision of apoptosis or autophagy by N1, N11-Diethylnorspermine (DENSpm) treatment in HCT116 Colon Cancer Cells”, International Congress on Polyamines Biological and Clinical Perspectives 2-7 September, Istanbul- TURKEY, P24, p.142, 2012 (Poster Presentation: H. İlhan). 15- O. Irmak, E.D. Arısan, A. Çoker-Gürkan, P. Obakan, N. Palavan-Ünsal, “The Role of Polyamine Catabolic Enzymes in Cisplatin-Induced Apoptotic Cell Death in MCF-7 Cells”, International Congress on Polyamines Biological and Clinical Perspectives, 2-7 September, Istanbul- TURKEY, P29, p.151, 2012 (Poster Presentation: O. Irmak). 16- Y. Akkoç, G.K. Akyüz, E.M. Kerman, E.D. Arısan, A. Çoker-Gürkan, P. Obakan, N. Palavan-Ünsal, “Potential Role of Polyamines in Roscovitine-Induced Autophagic/Apoptotic Cell Death in MCF-7 and MDA-MB-231 Breast Cancer Cells”, International Congress on Polyamines Biological and Clinical Perspectives, 2-7 September, Istanbul- TURKEY, P41, p.170, 2012 (Poster Presentation: Y. Akkoç-GK Akyüz-EM. Kerman). 17- Ş. Yıldırım, M.B. Özturk, E.D. Arısan, P. Obakan, A. Çoker- Gürkan, N. Palavan-Ünsal, “PPAR is the Critical Upstream Factor in Cyclin-Dependent Kinase Inhibitors Roscovitine and Purvalanol A- Induced SSAT Upregulation in MCF-7 Cells”, Page 6 of 15 International Congress on Polyamines Biological and Clinical Perspectives, 2-7 September, Istanbul- TURKEY, P33, p.156, 2012 (Poster Presentation: Ş. Yıldırım-MB. Öztürk). 18- Z. Akyol, A. Çoker-Gürkan, E.D. Arısan, N. Palavan-Ünsal, “N1, N11Diethylnorspermine (DENSpm) Modulates the Paclitaxel-Induced Apoptosis in MCF-7 wt and Bcl-2 Overexpressing Breast Cancer Cells”, International Congress on Polyamines Biological and Clinical Perspectives, 2-7 September, Istanbul- TURKEY, P39, p.168, 2012 (Poster Presentation: Z. Akyol). 19- Y. Akkoç, M. Çelik, P. Obakan, A. Çoker Gürkan, E.D. Arisan, N. Palavan-Ünsal, “The functional role of Bcl-2 in the regulation of curcumin induced autophagic/apoptotic cell death in MCF-7 breast cancer cells”, Conference on Apoptosis and Cancer, Cambridge, UK, June 14-15 2012, (Poster Presentation: Y. Akkoç-M. Çelik). 20- A.Coker, E.D.Arisan, N.Palavan-Unsal. Roscovitine modulated autophagic cell death related to polyamine metabolism in HCT-116 colon cancer cells. International Congress on Biogenic Amines: Biochemical, Physiological and Clinical Perspectives. 48 pp. 21– 25 Eylül, Alberè di Tenna (Trento), Italy, 2011 (Selected Poster-Oral Presentation: A. Coker) 21- A.Coker, S.Arisan, D.Coskun, A.Yavuz, E.D.Arisan, N.C.Sonmez, N.Palavan-Unsal. Investigation of Fetuin-A SNP in urinary stone disease patients 4th International Congress of Molecular Medicine, 67pp., 27-30 June, Istanbul- TURKEY, 2011 (Poster Presentation: D. Coskun) 22- A. Coker, S.Arisan, D. Coskun, A.Yavuz, E. D. Arisan, N.C. Sonmez, N. Palavan-Unsal. “Investigation of Fetuin-A SNP in urinary stone disease patients”, in vivo International Journal of Experimental and Clinical Pathophysiology and Drug Research, May- June 2011, 25 (3), Page: 521. 23- A. Coker, S. Arisan, D. Coskun, T. Kizilboga, ED. Arisan, NC. Sönmez, S. Guney, N. Palavan-Ünsal “The Investigatin of possible association between Fetuin-A 766 CC and IL-10 (-1082 AG and -572 AC) gene polymorphism in urolithiasis” 1st Meeting of the EAU Section of Urolithiasis (EULİPS), E91, 7-10 Eylül 2011, London, England, European Urology Supplements 10 (2011), Page: 484. 24- A. Coker, T. Kizilboga, E.D. Arisan, S. Arisan, N.C. Sönmez, S. Guney, N. PalavanÜnsal “Interleukin-1 beta (-511 CT), receptor antagonist VNTR and Interleukin-6 (-174 G C, -592GA) gene polymorphisms in urolithiasis”, 1st Meeting of the EAU Section of Urolithiasis (EULİPS), E92, 7-10 September 2011, London, England, European Urology Supplements 10 (2011), Page: 484-485, 2011. 25- A.Coker, E.D.Arisan, N.Palavan-Unsal. Modulation of catabolic pathway in ROSC treated Caco-2 cells. "2nd International Conference on the Role of Polyamines and their Analogs in Cancer and other Diseases” 199 pp., 1-6 December, Sapienza University of Rome, Italy, 2010 (Oral Presentation: A. Coker) 26- N.Palavan-Unsal, E.D.Arisan, P.Obakan, A.Coker, I.Ozdemir. Cyclin dependent kinase inhibitors modulates polyamine metabolism in MDA-MB-231 cells. "2nd International Conference on the Role of Polyamines and their Analogs in Cancer and other Diseases” 1-6 December, Sapienza University of Rome, Italy, 131 pp., 2010 (Oral Presentation: N. Palavan Ünsal) Page 7 of 15 27- E.D.Arisan, P.Obakan, A.Coker, N.Palavan-Unsal. Investigation of purvalanol-induced apoptosis in MCF-7 breast cancer cell lines. "2nd International Conference on the Role of Polyamines and their Analogs in Cancer and other Diseases” 193 pp., 1-6 December, Sapienza University of Rome, Italy, 2010 (Poster Presentation: E. D. Arisan) 28- P.Obakan, E.D.Arisan, N.Palavan-Unsal, A.Coker. Combined treatment of Roscovitine and DFMO induced caspase dependent-apoptosis in MCF-7 cells. "2nd International Conference on the Role of Polyamines and their Analogs in Cancer and other Diseases” 1-6 December, Sapienza University of Rome, Italy, 205 pp., 2010 (Oral Presentation: P.Obakan) 29- S.Akyuz, A.E.Ozel, K.Balci, T.Akyuz, A.Coker, E.D.Arisan, N.Palavan-Unsal, A.Ozalpan. Micro Raman spectroscopic investigation of the interaction of cultured HCT116 colon cancer cells with alpha-difluoromethylornithine (DFMO), an irreversible inhibitor of ornithine decarboxylase. EUCMOS 30th European congress on molecular spectroscopy with GISR, Florence, Italy, PS2-21, 107 pp., 2010 (Oral Presentation: S. Akyuz) 30- A.Coker, E.D.Arisan, N.Palavan-Unsal. The involvement of polyamines in seliciclib induced apoptosis and ROS generation in HCT116 colon carcinoma cells. Joint 4th EORTC Pathobiology Group Annual Meeting and 1st Internationally Multidisciplinary Cancer Research Congress. P13, Antalya-Turkey, 2009 (Poster Presentation: A. Coker) 31- S.Akyuz, A.E.Ozel, K.Balci, T.Akyuz, A.Coker, E.D.Arisan, N.Palavan-Unsal, A.Ozalpan. Micro raman spectroscopic investigation of the interaction of cultured HCT116 colon cancer cells with roscovitine. 5th International Conference on Vibrational Spectroscopy (ICAVS5), 31 pp., Melbourne, Australia, 12-17 July, 2009 (Oral Presentation: S. Akyuz) 32- A. Coker, A. Arman, O. Sarıoz, B. Yüksel, A. Ozon “Growth hormone receptor (GHR) mutations in Turkish Children with Laron Syndrome”, 11th European Congress of Endocrinology, 25-29 April 2009, Endocrine Abstracts (2009) V: 20, P527, IstanbulTURKEY (Poster Presentation: A. Coker). 33- A. Arman, A. Coker, E. Cetinkaya, B. Dundar, Z. Siklar, O. Sarioz, A. Buyukgebiz, “Genetic characterization of children with isolated Growth Hormone Deficiency in Turkish Population”, 11th European Congress of Endocrinology, 25-29 April 2009, Endocrine Abstracts (2009) V: 20, P526, Istanbul- TURKEY (Poster Presentation: A. Arman). 34- A. Arman, E. Cetinkaya, B. Dundar, Z. Sıklar, A. Coker, A. Buyukgebiz, “Characterization GH-N mutations in children with isolated Growth Hormone Deficiency in Turkish Population”, 47th Annual Meeting of the European Society for Paediatric Endocrinology (ESPE), P2-d3-662, 20-23 September 2008, İstanbul-Turkiye, Hormone Research From Developmental Endocrinolgy to Clinical Research, 70: Suppl. 1, Sayfa: 197 (Poster Presentation: A. Arman). 35- A. Arman, A. Coker, O. Soylu, A. Yildirim, T. Tezel, “A genetic association between Myocardial Infarction (MI) and Interleukin-1 B (+ 3953) gene polymorphism in turkish population”, 15th Meeting of Balkan Clinical Laboratory Federation, 4-7 September 2007, Antalya- TURKEY, Balkan Journal of Clinical Laboratory, XIV, 07, 1, OP-11 (Oral Presentation: A. Arman). Page 8 of 15 36- S. Turan, A. Arman, T. Guran, T. Akcay, A. Coker, A. Bereket, “Novel Mutations in cathepsin K gene in Turkish patients with pycnodysostosis”, 46th Annual Meeting of the European Society for Paediatric Endocrinology (ESPE), P01-225, 27-30 June 2007, Helsinki-Finlandiya, Hormone Research From Developmental Endocrinology to Clinical Research, 68: Suppl.1, Sayfa: 70, (Poster Presentation: S. Turan). 37- P. Isguven, A. Arman, M. Yildiz, I. Arslanoglu, A. Coker, M. Erguven, “Novel Splice site mutation of the growth hormone receptor gene in Turkish boy with Laron syndrome”, 46th Annual Meeting of the European Society for Paediatric Endocrinology (ESPE), P03558, 27-30 June 2007, Helsinki-Finlandiya, Hormone Research From Developmental Endocrinology to Clinical Research, 68: Suppl. 1, Sayfa: 173 (Poster Presentation: P. Isgüven). 38- A. Coker, A. Arman, “No association between IL-1 A -889 polymorphism and Coronary Artery Disease (CAD) in Turkish Population”, II. Congress of Molecular Medicine From Cell the Bedside, 24-26 March 2007, P045, Sayfa: 282, Istanbul- TURKEY, (Poster Presentation: A. Coker). 39- A. Arman, A. Coker, “The prevalence of Interleukin-1 Receptor Antagonist gene (IL1RN) VNTR polymorphism in Turkish Population”, II. Congress of Molecular Medicine From Cell the Bedside, 24-26 March 2007, P046, Sayfa: 282-283, Istanbul- TURKEY, (Poster Presentation: A. Arman). 40- S. Becit, A. Arman, A. Coker, N. Isık, F. Candan, “The lack association between Interleukin 1 A -889 polymorhism and Parkinson Disease in Turkish Population”, II. Congress of Molecular Medicine From Cell the Bedside, 24-26 March 2007, P047, Sayfa:283, Istanbul- TURKEY, (Poster Presentation: S. Becit). 41- A. Coker, A. Arman, O. Soylu, A. Yıldırım, N. Ercelen, H. Aydogan, T. Tezel, “Interleukin-1 Receptor Antagonist 2/2 Genotype is associated with Single Vessel Coronary Artery Disease in Turkish Population, FEBS Forum for Young Scientists, 2006, Istanbul- TURKEY (Oral Presentation: A. Çoker). 42- A. Coker, A. Arman, O. Soylu, A. Yıldırım, N. Ercelen, H. Aydogan, T. Tezel, “Interleukin-1 Receptor Antagonist 2/2 Genotype is associated with Single Vessel Coronary Artery Disease in Turkish Population”, 31st FEBS Congress, 24-29 June 2006, PP-498, the FEBS Journal, V:273, Supplement:1, Sayfa:211, Istanbul- TURKEY (Poster Presentation: A. Çoker). 43- A. Arman, A. Ozon, P.S. Isguven, N. Yordam, A. Coker, I. Peker, “Mutations of the Growth Hormone Receptor Gene in Turkish patients with Laron-type dwarfism”, 31st FEBS Congress, 24-29 June 2006, OP-10, the FEBS Journal, V:273, Supplement:1, Sayfa:45, Istanbul- TURKEY(Poster Presentation: A. Arman). 44- A. Arman, A. Coker, “Growth Hormone Antagonist, G120K treated-Cell Line Expressing W122A mutation of GHR did not reverse STAT5 phosphorylation”, 1st Congress of Molecular Medicine From Cell to Bedside, 16-19 April 2005, Advances in Molecular Medicine International Journal of Molecular Biology, Biochemistry and Gene Technology, V (1), Supplement, P153, Sayfa:455-456, 2005, Istanbul- TURKEY, (Poster Presentation: A. Arman). 45- A. Arman, A. Coker, “Applications of Ribozymes in Medicine”, 1st Congress of Molecular Medicine From Cell to Bedside, 16-19 April 2005, Advances in Molecular Page 9 of 15 Medicine International Journal of Molecular Biology, Biochemistry and Gene Technology, V(1), 5 Supplement, P156, Sayfa:456-457, 2005, Istanbul- TURKEY, (Poster Presentation: A. Arman). 46- A. Arman, A. Coker, “JAK2 is not involved in the regulation the activation of Stat3induced by IL-1”, 11th International Biomedical Science and Technology Days, 6-10 September 2004, GBP10, Sayfa: 66, Ankara- TURKEY, (Poster Presentation: A. Çoker). 47- A. Arman, A. Coker, “The Effect of Sodium Arsenite and 15-deoxy12, 14-PGJ2 on IL1 induced hSIE, StatBE, NF-B and APRE Reporter Plasmids”, 11th International Biomedical Science and Technology Days, 6-10 September 2004, GBP08, Sayfa: 65, Ankara- TURKEY, (Poster Presentation: A. Çoker). 7.3 Books and sections in books published internationally 7.4 Articles published in peer reviewed national journals 1- Ajda COKER, Ahmet ARMAN Human Growth Hormone Normal (hGH-N) Advances in Molecular Biology, Volume: 3, Number 1-2, 9-16, 2010. 7.5 Papers delivered at national conferences and printed as proceedings 1. N. Erzaim, A. Arman, Ş. Aktan, A. Çoker, N. Işık, “NFkB (-94 ins/del ATTG) Gen Polimorfizminin Türk Populasyonda Multipl Skleroz İle İlişkisi”, XII. Ulusal Tıbbi Biyoloji ve Genetik Kongresi, 27-30 October 2011, Antalya-TURKEY, Türkiye Klinikleri Tıp Bilimleri Dergisi, 2011; 31 (Suppl), Page:219 (Poster Presentation: N. Erzaim). 2. Ş. Aktan, A. Arman, N. Erzaim, A. Çoker, N. Işık, “Türk toplumunda IL-8 -251 A/T Gen Polimorfizminin Multipl Skleroz (MS) Hastalığı ile İlişkisi”, XII. Ulusal Tıbbi Biyoloji ve Genetik Kongresi, 27-30 October 2011, Antalya-TURKEY, Türkiye Klinikleri Tıp Bilimleri Dergisi, 2011; 31 (Suppl), Page: 219 (Poster Presentation: Ş.Aktan). 3. A. Coker, A. Arman, B. Yüksel, F. Temiz, A.K Topaloglu, “Laron Sendromlu Hastalarda Büyüme Hormonu Reseptörü Geninde Mutasyon Taranması ve W104R Mutasyonunun Biyolojik Aktivitesinin Belirlenmesi” XIII. Ulusal Pediatrik Endokrin ve Diyabet Kongresi, 17-21 November 2009, Antalya-TURKEY, SS-04, Page: 96 (Oral Presentation: A. Çoker). 4. A. Arman, A. Coker, E. Cetinkaya, B. Dundar, Z. Siklar, A. Buyukgebiz, “İzole Büyüme Hormonu Eksikliği Sendromlu Çocukların Büyüme Hormonu Geninde tespit ettiğimiz mutasyonların fonksiyonlarının hücre kültüründe belirleme” XIII. Ulusal Pediatrik Endokrin ve Diyabet Kongresi, 17-21 November 2009, SS-03, AntalyaTURKEY, Page: 95 (Oral Presentation: A.Arman). 5. A. Coker, A. Arman O. Soylu, A. Yıldırım, T. Tezel, “Türk Populasyonunda İnterlökin-1 B (-511) gen polymorfizminin akut koroner sendrom ile ilişkilisi” X. Page 10 of 15 6. 7. 8. 9. Ulusal Tıbbi Biyoloji ve Genetik Kongresi, 6-9 September 2007, Antalya- TURKEY, S34, Page: 112 (Oral Presentation: A. Çoker). Ö. Sarıöz, A. Arman, A. Çoker, N. İnanc, H. Direskeneli, “Türk Populasyonunda, Romatoid Artritli Hastalarda, İnterlökin-6 Gen Polimorfizmlerinin İncelenmesi”, IX Ulusal Romatoloji Kongresi, 11-15 October 2008, Antalya-TURKEY, P0041, Page: 156 (Poster Presentation: O. Sarıöz). S. Becit, A. Arman, A. Coker, N. Isık, F. Candan, “Türk Parkinson Hastaları’nda İnterlökin-1 Reseptör Antagonist (IL-1RN) ve İnterlökin-1B Gen Polimorfizmleri” X. Ulusal Tıbbi Biyoloji ve Genetik Kongresi, 6-9 September 2007, Antalya-TURKEY, P36, Page: 156 (Poster Presentation: S. Becit). O. Sarioz, A. Arman, A. Coker, S. Becit, H. Direskeneli, “Lack of association between Interleukin-1 Alpha (-889) gene polymorphisms and Rheumatoid Arthritis in Turkish population”, X. Ulusal Tıbbi Biyoloji ve Genetik Kongresi, 6-9 September 2007, Antalya- TURKEY, P92, Page: 212 (Poster Presentation: O. Sarıöz). A. Arman, B. Yılmaz, A. Çoker, N. İnanc, H. Direskeneli, “Türk Populasyonunda, Romatoid Artritli Hastalarda, İnterlökin-1 Reseptör Antagonist (IL-1RN) ve İnterlökin-1B Gen Polimorfizmlerinin incelenmesi”, Romatoloji 2005, 30 August-4 September 2005, Konya-TURKEY, SS-6, Page: 151 (Poster Presentation: A. Arman). 7.6 Other publications 1. 2. 3. 4. 5. A. Coker-Gurkan, E. D. Arisan, H. İlhan, P. Obakan, N. Palavan-Unsal, “Inhibition of Cellular Autophagic Responses against N1, N11-Diethylnorspermine (DENSpm) Enhanced Apoptosis in HCT116 and SW480 Colon Cancer Cells”, 16-21 June 2013, Waterville Valley, USA (Poster Presentation: Ajda Çoker Gürkan) E. D. Arısan, M.B Öztürk, A. Çoker-Gürkan, P. Obakan, N. Palavan-Ünsal, “Ibuprofen induced apoptosis through c-myc sifgnaling pathway related to polyamines in p53 null PC3 cells”, 16-21 June 2013, Waterville Valley, USA (Poster Presentation: Damla Arısan) D. Coskun, P. Obakan, E.D. Arisan, A. Coker-Gurkan, N. Palavan-Unsal, “The Potential Role of Polyamines in Epibrassinolide-Induced Apoptotic Cell Death in HCT116 and HT29 Colon Carcinoma Cells”, 16-21 June 2013, Waterville Valley, USA (Poster Presentation: Narçın Palavan Ünsal). O. Berrak, E.D. Arisan, P. Obakan, A. Coker- Gurkan, N. Palavan-Unsal, “Cotreatment of rapamycin prevented activation of polyamine oxidase and apoptosis via triggering autophagy after CDK inhibitor treatment in LNCaP cells”, 16-21 June 2013, Waterville Valley, USA (Poster Presentation: Özge Berrak) Y. Akkoç, E.D. Arisan, P. Obakan, A. Çoker-Gürkan, N. Palavan-Ünsal, “Cotreatment of PI3K inhibitor and curcumin overcomes Bcl-2 mediated drug-resistance in MCF-7 breast cancer cells via activating SSAT”, 16-21 June 2013, Waterville Valley, USA (Poster Presentation: Yunus Akkoç) Page 11 of 15 P. Obakan, P. Özfiliz, E.D. Arisan, A. COKER-GURKAN, N. PALAVAN-UNSAL, “Purvalanol A is a Strong Apoptotic Inducer via Activating Polyamine Catabolic Pathway in MCF-7 Estrogen Receptor + Breast Cancer Cells”, EMBO Young Scientist Forum, 14-16 June 2012, Istanbul-TURKEY (Poster Presentation: P. Obakan). 7. N. Palavan-Unsal, E.D. Arisan, A. Coker, “Alterations in Apoptotic and Polyamine Catabolic Pathway in HCT116wt and HCT116 Puma-/- Cell Lines Treated with Cdk Inhibitors Gordon Research Conferences on Polyamines”, Polyamine Genetics, Metabolism, Cellular Homeostasis and Drug Discovery, 19-24 June 2011, Waterville Valley, USA (Poster Presentation: N. Palavan-Unsal) 8. A. Coker, N. Palavan-Unsal, E.D. Arisan, “Alterations in Apoptotic and Polyamine Catabolic Pathway in HCT116 wt and HCT116 Bax-/- Cell Lines Treated with Cdk Inhibitors”, Gordon Research Conferences on Polyamines, Polyamine Genetics, Metabolism, Cellular Homeostasis and Drug Discovery, 19-24 June 2011, Waterville Valley, USA (Poster Presentation: A. Coker). 9. N. Palavan-Unsal, E.D. Arisan, A. Coker, “Roscovitine induced apoptosis is enhanced by ODC inhibition in HCT116 colon carcinoma cells”, Gordon Research Conferences on Polyamines. Polyamine Genetics, Metabolism, Cellular Homeostasis and Drug Discovery, 21-26 June 2009, Waterville Valley, USA (Poster presentation: N. Palavan-Ünsal) 10. E.D.Arisan, N.Palavan-Unsal, A.Coker. ODC siRNA sensitizes HCT116 colon carcinoma cells to roscovitine induced apoptosis. Gordon Research Conferences on Polyamines. Polyamine Genetics, Metabolism, Cellular Homeostasis and Drug Discovery. 21-26 June 2009 Waterville Valley, USA (Poster presentation: E. D. Arisan) 6. 8. Projects directed and participated 1. Curcumin’in terapotik etkinliğinin otokrin büyüme hormonu sinyal yolağı aracılığı ile farklı meme kanseri hücrelerinde poliamin metabolizması irdelenerek incelenmesi” (1001-TÜBİTAK KBAG- Project No: 113Z791, 2014-2017, Director) 2. Epibrassinolidle Tetiklenen Hücre Ölümünün Endoplazmik Retikulum Stresi İle İlişkisinin Kolon Kanseri Hücre Hatlarında Araştırılması (3001-TÜBİTAK Başlangıç 3001, 113Z845, 2014-2016, Researcher) 3. N1, N11- Dietilnorspermin (Denspm)' in Hct116 Ve Sw480 Kolon Kanseri Hücrelerinde Otofaji Uzerine Etkisinin Poliamin Metabolizması Açısından Araştırılması, TÜBİTAK (TBAG 212T227- 15/02/2013-15/02/2014, Director). 4. Bax veya Puma ifadesi görülmeyen HCT116 kolon kanseri hücrelerinde epibrassinolidin terapötik etkisinin modellenmesi (Project Director: Prof. Dr. Narçin Palavan Ünsal, Master Thesis of Onur Irmak). Page 12 of 15 5. Diklofenak’ın apoptotik etkilerinin NFkB ve PPAR ile etkileşimi sonucunda DLD-1 ve SW480 kolon kanseri hücrelerinde gösterimi (Project director: N. Palavan Ünsal, Research Project of Şeyma Yıldırım) 6. Epibrassinolidin terapotik etkisinin kolon kanseri hücre hatlarında gösterimi (Project director: N Palavan Ünsal, Master Thesis of Deniz Coşkun and Esin Güvenir, TUBİTAK 1002, January 2013-January 2014) 9. Administrative designations 2013- Istanbul Kultur University, Molecular Biology and Genetics Department, Department WEB-Coordinator. 2012- Istanbul Kultur University, Molecular Biology and Genetics Department, Department Accreditation Community Member. 2012- Istanbul Kultur University, Molecular Biology and Genetics Department, Foreign Student Advisor. 2011- Istanbul Kultur University, Molecular Biology and Genetics Department, Department Bologna Coordinator 2009- Istanbul Kultur University, Molecular Biology and Genetics Department, Department ECTS Coordinator. 2009-2010- Istanbul Kultur University, Molecular Biology and Genetics Department, Secretary of Advances in Molecular Biology Journal 10. Membership in scholarly institutions 2008 Moleküler Kanser Araştırma Derneği (MOKAD) Üyeliği 2009 European Association for Cancer Research (EACR) Üyeliği 2012 Moleküler Biyoloji Derneği 11. Awards and grants 2012- Istanbul Kultur University, Academic Achievement Award 2011- Biogenic Amines Congress, Selected Poster Presentation 2011- Biogenic Amines Congress, Participation and Views Scholarship. 2011- La Sapienza University, Academic Personal Exchange, ERASMUS, Scientific Research, September 2011. 2010- Istanbul Kultur University, Academic Achievement Award 2009- Istanbul Kultur University, Academic Achievement Award 2009- XIII. Ulusal Pediatrik Endokrin ve Diyabet Kongresi, Mansiyon Award 2009- XIII. Ulusal Pediatrik Endokrin ve Diyabet Kongresi, Participation and Views Scholarship Page 13 of 15 2009- Joint 4th Eortic Pathobiology Group Annual Meeting and 1st International Multidisciplinary Cancer Research Congress, Participation and Views Scholarship 2009- Istanbul Kultur University, Academic Achievement Award 2006- FEBS Forum for Young Scientists, Participation and Views Scholarship 12. Courses taught over the last two academic years: Academic Year Term Hours/week Theoretical Applied Biology 2 8 Course Name Molecular 32 Techniques I Introduction Fall 2012-2013 to 2 0 33 Immunology Industrial Microbiology 2 0 27 Developmental Biology 2 0 Senior Projects I Research Project I Molecular Biology Techniques II Preimplantation 3 0 2 0 4 8 21 5 1 2 0 Page 14 of 15 33 29 Genetic Diagnosis Spring Number of Students Genetic Engineering 2 0 25 Human Genetics 2 0 28 Tumor Immunology* 4 0 Senior Projects I Research Project I 3 0 0 4 1 5 1 Academic Year Term Hours/week Theoretical Applied Biology 2 8 Course Name Molecular 31 Techniques I Introduction to 2 0 25 Immunology Fall Industrial Microbiology 2 0 26 Developmental Biology 2 0 Senior Projects I Research Project I Tumor Immunology* 3 0 4 0 4 0 22 7 2 Thesis* Molecular Biology Techniques II Preimplantation 2013-2014 2 8 2 0 29 22 Genetic Engineering 2 0 29 Human Genetics 2 0 32 4 0 Genomics and 2 Proteomics Senior Projects I Research Project I Thesis* Page 15 of 15 1 1 Genetic Diagnosis Spring Number of Students 3 0 0 4 8 2 1
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